RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 KNCNA6PVL3 124 aa16.74■□□□□ 0.27
CBWD3-213ENST00000618217 ZNF705FA8MVS1 300 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-213ENST00000618217 GDF5OSQ5U4N7 250 aa16.74■□□□□ 0.27
CBWD3-213ENST00000618217 LINC00322Q6ZN03 302 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-213ENST00000618217 RBMY1BA6NDE4 496 aaKnown RBP16.74■□□□□ 0.27
CBWD3-213ENST00000618217 RBMY1EA6NEQ0 496 aaKnown RBP16.74■□□□□ 0.27
CBWD3-213ENST00000618217 RBMY1DP0C7P1 496 aaKnown RBP16.74■□□□□ 0.27
CBWD3-213ENST00000618217 ICAM4Q14773 271 aa16.74■□□□□ 0.27
CBWD3-213ENST00000618217 FOXI2Q6ZQN5 318 aa16.74■□□□□ 0.27
CBWD3-213ENST00000618217 ZNF738Q8NE65 137 aa16.74■□□□□ 0.27
CBWD3-213ENST00000618217 Q9H3A6 140 aa16.74■□□□□ 0.27
CBWD3-213ENST00000618217 SAV1Q9H4B6 383 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-213ENST00000618217 A0A1B0GV50 99 aa16.73■□□□□ 0.27
CBWD3-213ENST00000618217 F6UB75 175 aa16.73■□□□□ 0.27
CBWD3-213ENST00000618217 M0R3E3 92 aa16.73■□□□□ 0.27
CBWD3-213ENST00000618217 ACTL10Q5JWF8 245 aa16.73■□□□□ 0.27
CBWD3-213ENST00000618217 RPUSD4Q96CM3 377 aaKnown RBP16.73■□□□□ 0.27
CBWD3-213ENST00000618217 MRPL53Q96EL3 112 aaKnown RBP16.73■□□□□ 0.27
CBWD3-213ENST00000618217 TUBA4BQ9H853 241 aa16.73■□□□□ 0.27
CBWD3-213ENST00000618217 A0A0J9YX75 114 aa16.72■□□□□ 0.27
CBWD3-213ENST00000618217 DEFB121Q5J5C9 76 aa16.72■□□□□ 0.27
CBWD3-213ENST00000618217 IQCF2Q8IXL9 164 aa16.72■□□□□ 0.27
CBWD3-213ENST00000618217 MRAPQ8TCY5 172 aa16.72■□□□□ 0.27
CBWD3-213ENST00000618217 AAMDCQ9H7C9 122 aa16.72■□□□□ 0.27
CBWD3-213ENST00000618217 PRELID1Q9Y255 219 aa16.72■□□□□ 0.27
CBWD3-213ENST00000618217 PRAC2D3DTV9 90 aa16.71■□□□□ 0.27
CBWD3-213ENST00000618217 H3BMM0 161 aa16.71■□□□□ 0.27
CBWD3-213ENST00000618217 PRB4P10163 310 aaPredicted RBP16.71■□□□□ 0.27
CBWD3-213ENST00000618217 HLA-DRB4P13762 266 aa16.71■□□□□ 0.27
CBWD3-213ENST00000618217 S100A1P23297 94 aa16.71■□□□□ 0.27
CBWD3-213ENST00000618217 LYPD6BQ8NI32 183 aa16.71■□□□□ 0.27
CBWD3-213ENST00000618217 OTORQ9NRC9 128 aa16.71■□□□□ 0.27
CBWD3-213ENST00000618217 HLA-DRB4X5D2U9 266 aa16.71■□□□□ 0.27
CBWD3-213ENST00000618217 FRMD6-AS1P0C7T7 363 aa16.7■□□□□ 0.26
CBWD3-213ENST00000618217 CCL20P78556 96 aa16.7■□□□□ 0.26
CBWD3-213ENST00000618217 TRPT1Q86TN4 253 aaKnown RBP16.7■□□□□ 0.26
CBWD3-213ENST00000618217 A0A1W2PRE2 83 aa16.7■□□□□ 0.26
CBWD3-213ENST00000618217 YTHDF2Q9Y5A9 579 aaKnown RBP16.7■□□□□ 0.26
CBWD3-213ENST00000618217 PGPA6NDG6 321 aa16.69■□□□□ 0.26
CBWD3-213ENST00000618217 A8MTW9 85 aa16.69■□□□□ 0.26
CBWD3-213ENST00000618217 EBLN2Q6P2I7 272 aa16.69■□□□□ 0.26
CBWD3-213ENST00000618217 OR8A1Q8NGG7 326 aa16.69■□□□□ 0.26
CBWD3-213ENST00000618217 CLUHP3Q96NS8 147 aa16.69■□□□□ 0.26
CBWD3-213ENST00000618217 RAB19A4D1S5 217 aa16.68■□□□□ 0.26
CBWD3-213ENST00000618217 GGTLC3B5MD39 225 aa16.68■□□□□ 0.26
CBWD3-213ENST00000618217 HBE1P02100 147 aa16.68■□□□□ 0.26
CBWD3-213ENST00000618217 ZNF705DP0CH99 300 aaPredicted RBP16.68■□□□□ 0.26
CBWD3-213ENST00000618217 ZNF705BP0CI00 300 aaPredicted RBP16.68■□□□□ 0.26
CBWD3-213ENST00000618217 STHQ8IWL8 128 aa16.68■□□□□ 0.26
CBWD3-213ENST00000618217 EIF4E3Q8N5X7 224 aaKnown RBP16.68■□□□□ 0.26
CBWD3-213ENST00000618217 FAM74A7A6NL05 159 aa16.67■□□□□ 0.26
CBWD3-213ENST00000618217 LOC102724200A0A096LPH7 203 aaPredicted RBP16.67■□□□□ 0.26
CBWD3-213ENST00000618217 RPL35AP18077 110 aaKnown RBP16.67■□□□□ 0.26
CBWD3-213ENST00000618217 UBE2G2P60604 165 aa16.67■□□□□ 0.26
CBWD3-213ENST00000618217 ARL6IP6Q8N6S5 226 aa16.67■□□□□ 0.26
CBWD3-213ENST00000618217 CNN1P51911 297 aaKnown RBP16.66■□□□□ 0.26
CBWD3-213ENST00000618217 SUMO1P63165 101 aaKnown RBP16.66■□□□□ 0.26
CBWD3-213ENST00000618217 ARL2-SNX15V9GYD0 113 aa16.66■□□□□ 0.26
CBWD3-213ENST00000618217 PMS2P11Q13670 270 aa16.65■□□□□ 0.26
CBWD3-213ENST00000618217 RXFP4Q8TDU9 374 aa16.65■□□□□ 0.26
CBWD3-213ENST00000618217 DIRC3C9JPN6 131 aa16.64■□□□□ 0.25
CBWD3-213ENST00000618217 PAGE4O60829 102 aa16.64■□□□□ 0.25
CBWD3-213ENST00000618217 DUSP14O95147 198 aaKnown RBP16.64■□□□□ 0.25
CBWD3-213ENST00000618217 HIST1H1AQ02539 215 aaPredicted RBP16.64■□□□□ 0.25
CBWD3-213ENST00000618217 TOR2AQ5JU69 321 aa16.64■□□□□ 0.25
CBWD3-213ENST00000618217 UQCC3Q6UW78 93 aa16.64■□□□□ 0.25
CBWD3-213ENST00000618217 AMTNQ6UX39 209 aa16.64■□□□□ 0.25
CBWD3-213ENST00000618217 CCDC28AQ8IWP9 274 aa16.64■□□□□ 0.25
CBWD3-213ENST00000618217 NKX6-2Q9C056 277 aaPredicted RBP16.64■□□□□ 0.25
CBWD3-213ENST00000618217 KIR2DL5BA0A0G2JN68 375 aa16.63■□□□□ 0.25
CBWD3-213ENST00000618217 KIR2DL5BA0A0G2JPC4 375 aa16.63■□□□□ 0.25
CBWD3-213ENST00000618217 GIG44P09565 113 aaPredicted RBP16.63■□□□□ 0.25
CBWD3-213ENST00000618217 PPT1P50897 306 aa16.63■□□□□ 0.25
CBWD3-213ENST00000618217 HAGHQ16775 308 aa16.63■□□□□ 0.25
CBWD3-213ENST00000618217 KIR2DL5AQ8N109 375 aa16.63■□□□□ 0.25
CBWD3-213ENST00000618217 C5orf17Q8NAS9 161 aa16.63■□□□□ 0.25
CBWD3-213ENST00000618217 OR4B1Q8NGF8 309 aa16.63■□□□□ 0.25
CBWD3-213ENST00000618217 OR10J6PQ8NGY7 276 aa16.63■□□□□ 0.25
CBWD3-213ENST00000618217 KIR2DL5BQ8NHK3 375 aa16.63■□□□□ 0.25
CBWD3-213ENST00000618217 IGKV2-40A0A087WW87 121 aaPredicted RBP16.63■□□□□ 0.25
CBWD3-213ENST00000618217 NPIPB6E9PJ23 425 aa16.63■□□□□ 0.25
CBWD3-213ENST00000618217 IGKV2D-40P01614 121 aaPredicted RBP16.63■□□□□ 0.25
CBWD3-213ENST00000618217 IGKV3-20P01619 116 aa16.63■□□□□ 0.25
CBWD3-213ENST00000618217 SLC25A5P05141 298 aaKnown RBP16.63■□□□□ 0.25
CBWD3-213ENST00000618217 CSN1S1P47710 185 aa16.63■□□□□ 0.25
CBWD3-213ENST00000618217 SRSF3P84103 164 aaKnown RBP16.63■□□□□ 0.25
CBWD3-213ENST00000618217 CMTM2Q8TAZ6 248 aa16.63■□□□□ 0.25
CBWD3-213ENST00000618217 FAM210AQ96ND0 272 aa16.63■□□□□ 0.25
CBWD3-213ENST00000618217 TREM1Q9NP99 234 aa16.63■□□□□ 0.25
CBWD3-213ENST00000618217 PRKDCP78527 4128 aaKnown RBP16.62■□□□□ 0.25
CBWD3-213ENST00000618217 NBEAL2Q6ZNJ1 2754 aa16.62■□□□□ 0.25
CBWD3-213ENST00000618217 GNG5P63218 68 aa16.62■□□□□ 0.25
CBWD3-213ENST00000618217 C9orf47Q6ZRZ4 202 aa16.62■□□□□ 0.25
CBWD3-213ENST00000618217 SBSPONQ8IVN8 264 aa16.62■□□□□ 0.25
CBWD3-213ENST00000618217 VGLL1Q99990 258 aa16.62■□□□□ 0.25
CBWD3-213ENST00000618217 AGPAT4-IT1Q9H0P7 198 aa16.62■□□□□ 0.25
CBWD3-213ENST00000618217 CSTL1Q9H114 145 aa16.62■□□□□ 0.25
CBWD3-213ENST00000618217 GNG13Q9P2W3 67 aa16.62■□□□□ 0.25
CBWD3-213ENST00000618217 RBAKDNA6NC62 111 aa16.61■□□□□ 0.25
CBWD3-213ENST00000618217 ERCC8Q13216 396 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms