RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 LILRA6Q6PI73 481 aa5.91□□□□□ -1.46
PDE6A-205ENST00000617647 NFAM1Q8NET5 270 aaPredicted RBP5.91□□□□□ -1.46
PDE6A-205ENST00000617647 ITLN1Q8WWA0 313 aa5.91□□□□□ -1.46
PDE6A-205ENST00000617647 ZGRF1Q86YA3 2104 aa5.91□□□□□ -1.46
PDE6A-205ENST00000617647 TRAV8-3A0A0A6YYJ7 113 aa5.9□□□□□ -1.46
PDE6A-205ENST00000617647 HLA-DMBP28068 263 aa5.9□□□□□ -1.46
PDE6A-205ENST00000617647 TMEM196Q5HYL7 178 aa5.9□□□□□ -1.46
PDE6A-205ENST00000617647 C1orf53Q5VUE5 145 aa5.9□□□□□ -1.46
PDE6A-205ENST00000617647 Q6P435 159 aa5.9□□□□□ -1.46
PDE6A-205ENST00000617647 PROK2Q9HC23 129 aa5.9□□□□□ -1.46
PDE6A-205ENST00000617647 PRO0461Q9UI25 63 aa5.9□□□□□ -1.46
PDE6A-205ENST00000617647 HCFC1P51610 2035 aa5.9□□□□□ -1.46
PDE6A-205ENST00000617647 IGKV3D-11A0A0A0MRZ8 115 aa5.9□□□□□ -1.46
PDE6A-205ENST00000617647 SHISA9B4DS77 424 aa5.9□□□□□ -1.46
PDE6A-205ENST00000617647 SLC25A53Q5H9E4 307 aa5.9□□□□□ -1.46
PDE6A-205ENST00000617647 TMEM240Q5SV17 173 aa5.9□□□□□ -1.46
PDE6A-205ENST00000617647 PHLDA1Q8WV24 401 aaPredicted RBP5.9□□□□□ -1.46
PDE6A-205ENST00000617647 SPANXCQ9NY87 97 aa5.9□□□□□ -1.46
PDE6A-205ENST00000617647 MAP1BP46821 2468 aaKnown RBP5.9□□□□□ -1.46
PDE6A-205ENST00000617647 CCL3P10147 92 aa5.9□□□□□ -1.47
PDE6A-205ENST00000617647 EFNA4P52798 201 aa5.9□□□□□ -1.47
PDE6A-205ENST00000617647 PRCDQ00LT1 54 aa5.9□□□□□ -1.47
PDE6A-205ENST00000617647 IL11RAQ14626 422 aa5.9□□□□□ -1.47
PDE6A-205ENST00000617647 CR1LQ2VPA4 569 aa5.9□□□□□ -1.47
PDE6A-205ENST00000617647 PRR30Q53SZ7 412 aaPredicted RBP5.9□□□□□ -1.47
PDE6A-205ENST00000617647 RPS19BP1Q86WX3 136 aaKnown RBP5.9□□□□□ -1.47
PDE6A-205ENST00000617647 Q8N7P7 452 aa5.9□□□□□ -1.47
PDE6A-205ENST00000617647 MAFAQ8NHW3 353 aaPredicted RBP5.9□□□□□ -1.47
PDE6A-205ENST00000617647 FXYD5Q96DB9 178 aa5.9□□□□□ -1.47
PDE6A-205ENST00000617647 RPP25Q9BUL9 199 aaKnown RBP5.9□□□□□ -1.47
PDE6A-205ENST00000617647 M0R2P5 195 aa5.9□□□□□ -1.47
PDE6A-205ENST00000617647 FHL3Q13643 280 aa5.9□□□□□ -1.47
PDE6A-205ENST00000617647 VMA21Q3ZAQ7 101 aa5.9□□□□□ -1.47
PDE6A-205ENST00000617647 Q6ZS92 163 aa5.9□□□□□ -1.47
PDE6A-205ENST00000617647 TMEM219Q86XT9 240 aa5.9□□□□□ -1.47
PDE6A-205ENST00000617647 KIAA1549LQ6ZVL6 1849 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 IGHV3OR15-7A0A075B7D8 119 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 A0A1W2PR77 199 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 SMCPP49901 116 aaPredicted RBP5.89□□□□□ -1.47
PDE6A-205ENST00000617647 Q6Q795 121 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 FOXA2Q9Y261 457 aaPredicted RBP5.89□□□□□ -1.47
PDE6A-205ENST00000617647 V9GYY9 64 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 hADV29S1A0JD25 119 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 RBAKDNA6NC62 111 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 LINC01620Q4KN68 170 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 MRAPQ8TCY5 172 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 MRPL20Q9BYC9 149 aaKnown RBP5.89□□□□□ -1.47
PDE6A-205ENST00000617647 AGRNO00468 2067 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 ARFGEF3Q5TH69 2177 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 IGHV3-64A0A075B6Q5 118 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 F8VRH5 84 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 LIFP15018 202 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 DLX6P56179 175 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 TFF2Q03403 129 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 NUP37Q8NFH4 326 aa5.89□□□□□ -1.47
PDE6A-205ENST00000617647 DNAJC13O75165 2243 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 TRAV13-1A0A0B4J241 112 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 UPK2O00526 184 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 SLC25A39Q9BZJ4 359 aaPredicted RBP5.88□□□□□ -1.47
PDE6A-205ENST00000617647 SPTY2D1-AS1A0A0U1RR47 76 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 CFC1BP0CG36 223 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 CFC1P0CG37 223 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 ZNF493Q6ZR52 646 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 KLHL30-AS1Q8NEE0 82 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 ADAMTS9Q9P2N4 1935 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 A0A0U1RQV1 116 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 ZNF785A8K8V0 405 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 F5H697 171 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 TIMM23O14925 209 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 SH2D1AO60880 128 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 DEFB104AQ8WTQ1 72 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 FAM167A-AS1Q96KT0 104 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 CXXC4Q9H2H0 198 aa5.88□□□□□ -1.47
PDE6A-205ENST00000617647 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.87□□□□□ -1.47
PDE6A-205ENST00000617647 NDUFA11Q86Y39 141 aa5.87□□□□□ -1.47
PDE6A-205ENST00000617647 CHCHD2Q9Y6H1 151 aaPredicted RBP5.87□□□□□ -1.47
PDE6A-205ENST00000617647 SAA1P0DJI8 122 aaPredicted RBP5.87□□□□□ -1.47
PDE6A-205ENST00000617647 IL17RELQ6ZVW7 336 aa5.87□□□□□ -1.47
PDE6A-205ENST00000617647 LTBP2Q14767 1821 aa5.87□□□□□ -1.47
PDE6A-205ENST00000617647 IGKV1OR2-108A0A075B7D4 117 aa5.87□□□□□ -1.47
PDE6A-205ENST00000617647 LILRA5A6NI73 299 aa5.87□□□□□ -1.47
PDE6A-205ENST00000617647 LINC01548A6NM66 108 aa5.87□□□□□ -1.47
PDE6A-205ENST00000617647 PRSS46E5RG02 174 aa5.87□□□□□ -1.47
PDE6A-205ENST00000617647 RNASE2P10153 161 aaKnown RBP5.87□□□□□ -1.47
PDE6A-205ENST00000617647 NXPH1P58417 271 aa5.87□□□□□ -1.47
PDE6A-205ENST00000617647 NPC2P61916 151 aa5.87□□□□□ -1.47
PDE6A-205ENST00000617647 ZNF784Q8NCA9 323 aaPredicted RBP5.87□□□□□ -1.47
PDE6A-205ENST00000617647 C8orf49Q96NF6 230 aa5.87□□□□□ -1.47
PDE6A-205ENST00000617647 SIGLEC9Q9Y336 463 aa5.87□□□□□ -1.47
PDE6A-205ENST00000617647 C19orf71A6NCJ1 209 aa5.86□□□□□ -1.47
PDE6A-205ENST00000617647 C16orf97H3BN30 126 aa5.86□□□□□ -1.47
PDE6A-205ENST00000617647 P0C879 139 aa5.86□□□□□ -1.47
PDE6A-205ENST00000617647 SAA2P0DJI9 122 aaPredicted RBP5.86□□□□□ -1.47
PDE6A-205ENST00000617647 GATA1P15976 413 aaPredicted RBP5.86□□□□□ -1.47
PDE6A-205ENST00000617647 SPANXDQ9BXN6 97 aa5.86□□□□□ -1.47
PDE6A-205ENST00000617647 PRSS22Q9GZN4 317 aa5.86□□□□□ -1.47
PDE6A-205ENST00000617647 FER1L5A0AVI2 2057 aa5.86□□□□□ -1.47
PDE6A-205ENST00000617647 ATG2AQ2TAZ0 1938 aa5.86□□□□□ -1.47
PDE6A-205ENST00000617647 MRPS12O15235 138 aaKnown RBP5.86□□□□□ -1.47
PDE6A-205ENST00000617647 IGHG4P01861 327 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms