RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 SLC39A9Q9NUM3 307 aa15.62■□□□□ 0.09
NEDD4L-237ENST00000617539 PXMP4Q9Y6I8 212 aa15.62■□□□□ 0.09
NEDD4L-237ENST00000617539 PVALBP20472 110 aaPredicted RBP15.61■□□□□ 0.09
NEDD4L-237ENST00000617539 RPL29P47914 159 aaKnown RBP15.61■□□□□ 0.09
NEDD4L-237ENST00000617539 ASAH1Q13510 395 aa15.61■□□□□ 0.09
NEDD4L-237ENST00000617539 GFI1BQ5VTD9 330 aa15.61■□□□□ 0.09
NEDD4L-237ENST00000617539 LINC00299Q6ZSB3 139 aa15.61■□□□□ 0.09
NEDD4L-237ENST00000617539 C16orf74Q96GX8 76 aa15.61■□□□□ 0.09
NEDD4L-237ENST00000617539 ZNF586Q9NXT0 402 aa15.61■□□□□ 0.09
NEDD4L-237ENST00000617539 PRSS29PA6NIE9 313 aa15.6■□□□□ 0.09
NEDD4L-237ENST00000617539 S100A11P31949 105 aa15.6■□□□□ 0.09
NEDD4L-237ENST00000617539 BAXQ07812 192 aa15.6■□□□□ 0.09
NEDD4L-237ENST00000617539 C15orf53Q8NAA6 179 aa15.6■□□□□ 0.09
NEDD4L-237ENST00000617539 OR1L4Q8NGR5 311 aa15.6■□□□□ 0.09
NEDD4L-237ENST00000617539 CHAC2Q8WUX2 184 aa15.6■□□□□ 0.09
NEDD4L-237ENST00000617539 GUK1Q16774 197 aa15.59■□□□□ 0.09
NEDD4L-237ENST00000617539 STX12Q86Y82 276 aa15.59■□□□□ 0.09
NEDD4L-237ENST00000617539 OR10J6PQ8NGY7 276 aa15.59■□□□□ 0.09
NEDD4L-237ENST00000617539 TMEM263Q8WUH6 116 aaKnown RBP15.59■□□□□ 0.09
NEDD4L-237ENST00000617539 PFDN5Q99471 154 aa15.59■□□□□ 0.09
NEDD4L-237ENST00000617539 TIMM8BQ9Y5J9 83 aaPredicted RBP15.59■□□□□ 0.09
NEDD4L-237ENST00000617539 CBY3A6NI87 242 aa15.58■□□□□ 0.08
NEDD4L-237ENST00000617539 F5H768 121 aa15.58■□□□□ 0.08
NEDD4L-237ENST00000617539 H7BYZ3 331 aa15.58■□□□□ 0.08
NEDD4L-237ENST00000617539 CT45A10P0DMU9 189 aa15.58■□□□□ 0.08
NEDD4L-237ENST00000617539 FGF7P21781 194 aa15.58■□□□□ 0.08
NEDD4L-237ENST00000617539 HBG1P69891 147 aa15.58■□□□□ 0.08
NEDD4L-237ENST00000617539 HBG2P69892 147 aa15.58■□□□□ 0.08
NEDD4L-237ENST00000617539 MZT2BQ6NZ67 158 aa15.58■□□□□ 0.08
NEDD4L-237ENST00000617539 C20orf144Q9BQM9 153 aa15.58■□□□□ 0.08
NEDD4L-237ENST00000617539 NOP10Q9NPE3 64 aaKnown RBP15.58■□□□□ 0.08
NEDD4L-237ENST00000617539 DYNC1H1Q14204 4646 aaKnown RBP15.58■□□□□ 0.08
NEDD4L-237ENST00000617539 NPIPB6E9PJ23 425 aa15.57■□□□□ 0.08
NEDD4L-237ENST00000617539 ATP5G1P05496 136 aa15.57■□□□□ 0.08
NEDD4L-237ENST00000617539 ATP5G3P48201 142 aa15.57■□□□□ 0.08
NEDD4L-237ENST00000617539 ZNF493Q6ZR52 646 aa15.57■□□□□ 0.08
NEDD4L-237ENST00000617539 GPN1Q9HCN4 374 aaPredicted RBP15.57■□□□□ 0.08
NEDD4L-237ENST00000617539 TRBV19A0A075B6N1 114 aa15.56■□□□□ 0.08
NEDD4L-237ENST00000617539 ZNF253O75346 499 aa15.56■□□□□ 0.08
NEDD4L-237ENST00000617539 NDUFB4O95168 129 aa15.56■□□□□ 0.08
NEDD4L-237ENST00000617539 SIX6O95475 246 aa15.56■□□□□ 0.08
NEDD4L-237ENST00000617539 IFITM3Q01628 133 aa15.56■□□□□ 0.08
NEDD4L-237ENST00000617539 GCSAMLQ5JQS6 135 aa15.56■□□□□ 0.08
NEDD4L-237ENST00000617539 S100ZQ8WXG8 99 aa15.56■□□□□ 0.08
NEDD4L-237ENST00000617539 ODF3Q96PU9 254 aa15.56■□□□□ 0.08
NEDD4L-237ENST00000617539 M0R3E3 92 aa15.55■□□□□ 0.08
NEDD4L-237ENST00000617539 ATP6V1FQ16864 119 aa15.55■□□□□ 0.08
NEDD4L-237ENST00000617539 LINC00612Q8N6U2 182 aa15.55■□□□□ 0.08
NEDD4L-237ENST00000617539 NPCDR1Q9BY65 106 aa15.55■□□□□ 0.08
NEDD4L-237ENST00000617539 TMEM14CQ9P0S9 112 aa15.55■□□□□ 0.08
NEDD4L-237ENST00000617539 J3KRW8 73 aa15.54■□□□□ 0.08
NEDD4L-237ENST00000617539 PYYP10082 97 aa15.54■□□□□ 0.08
NEDD4L-237ENST00000617539 NHLH2Q02577 135 aa15.54■□□□□ 0.08
NEDD4L-237ENST00000617539 DNAH11Q96DT5 4516 aa15.53■□□□□ 0.08
NEDD4L-237ENST00000617539 TRAV12-3A0A0B4J271 114 aa15.53■□□□□ 0.08
NEDD4L-237ENST00000617539 MPDU1O75352 247 aa15.53■□□□□ 0.08
NEDD4L-237ENST00000617539 UPK1BO75841 260 aa15.53■□□□□ 0.08
NEDD4L-237ENST00000617539 NUDT3O95989 172 aa15.53■□□□□ 0.08
NEDD4L-237ENST00000617539 FAM3BP58499 235 aaPredicted RBP15.53■□□□□ 0.08
NEDD4L-237ENST00000617539 THAP6Q8TBB0 222 aa15.53■□□□□ 0.08
NEDD4L-237ENST00000617539 RNF141Q8WVD5 230 aa15.53■□□□□ 0.08
NEDD4L-237ENST00000617539 MRPL53Q96EL3 112 aaKnown RBP15.53■□□□□ 0.08
NEDD4L-237ENST00000617539 OR5AC2Q9NZP5 309 aa15.53■□□□□ 0.08
NEDD4L-237ENST00000617539 H0YIZ8 118 aa15.52■□□□□ 0.08
NEDD4L-237ENST00000617539 ERCC8Q13216 396 aa15.52■□□□□ 0.08
NEDD4L-237ENST00000617539 OR5C1Q8NGR4 320 aa15.52■□□□□ 0.08
NEDD4L-237ENST00000617539 ZNRF2Q8NHG8 242 aa15.52■□□□□ 0.08
NEDD4L-237ENST00000617539 ENKURQ8TC29 256 aa15.52■□□□□ 0.08
NEDD4L-237ENST00000617539 SLC25A2Q9BXI2 301 aa15.52■□□□□ 0.08
NEDD4L-237ENST00000617539 HIST1H1EP10412 219 aaKnown RBP15.51■□□□□ 0.07
NEDD4L-237ENST00000617539 LEPP41159 167 aa15.51■□□□□ 0.07
NEDD4L-237ENST00000617539 EXOC3-AS1Q8N2X6 119 aa15.51■□□□□ 0.07
NEDD4L-237ENST00000617539 FAM167A-AS1Q96KT0 104 aa15.51■□□□□ 0.07
NEDD4L-237ENST00000617539 ATG101Q9BSB4 218 aa15.51■□□□□ 0.07
NEDD4L-237ENST00000617539 LRRC37A5PQ49AS3 106 aa15.5■□□□□ 0.07
NEDD4L-237ENST00000617539 FAM19A4Q96LR4 140 aa15.5■□□□□ 0.07
NEDD4L-237ENST00000617539 NMES1Q9C002 83 aa15.5■□□□□ 0.07
NEDD4L-237ENST00000617539 LINC00588Q9Y4M8 146 aa15.5■□□□□ 0.07
NEDD4L-237ENST00000617539 HOXA5P20719 270 aa15.49■□□□□ 0.07
NEDD4L-237ENST00000617539 PDE6HQ13956 83 aa15.49■□□□□ 0.07
NEDD4L-237ENST00000617539 C1orf134Q5TEV5 83 aa15.49■□□□□ 0.07
NEDD4L-237ENST00000617539 MIR17HGQ75NE6 70 aa15.49■□□□□ 0.07
NEDD4L-237ENST00000617539 CCDC28AQ8IWP9 274 aa15.49■□□□□ 0.07
NEDD4L-237ENST00000617539 BLNKQ8WV28 456 aa15.49■□□□□ 0.07
NEDD4L-237ENST00000617539 PYGO2Q9BRQ0 406 aa15.49■□□□□ 0.07
NEDD4L-237ENST00000617539 AGPAT4-IT1Q9H0P7 198 aa15.49■□□□□ 0.07
NEDD4L-237ENST00000617539 GAGE12BA1L429 117 aa15.48■□□□□ 0.07
NEDD4L-237ENST00000617539 A6NHS1 94 aa15.48■□□□□ 0.07
NEDD4L-237ENST00000617539 KLLNB2CW77 178 aa15.48■□□□□ 0.07
NEDD4L-237ENST00000617539 E5RGE8 158 aa15.48■□□□□ 0.07
NEDD4L-237ENST00000617539 GAGE7O76087 117 aa15.48■□□□□ 0.07
NEDD4L-237ENST00000617539 GAGE12FP0CL80 117 aa15.48■□□□□ 0.07
NEDD4L-237ENST00000617539 GAGE12GP0CL81 117 aa15.48■□□□□ 0.07
NEDD4L-237ENST00000617539 GAGE12IP0CL82 117 aa15.48■□□□□ 0.07
NEDD4L-237ENST00000617539 H2BFSP57053 126 aa15.48■□□□□ 0.07
NEDD4L-237ENST00000617539 CLINT1Q14677 625 aa15.48■□□□□ 0.07
NEDD4L-237ENST00000617539 PRELID1Q9Y255 219 aa15.48■□□□□ 0.07
NEDD4L-237ENST00000617539 TIMM9Q9Y5J7 89 aa15.48■□□□□ 0.07
NEDD4L-237ENST00000617539 CD300CQ08708 224 aa15.47■□□□□ 0.07
NEDD4L-237ENST00000617539 SLC25A31Q9H0C2 315 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 298.6 ms