RNA–Protein interactions for RNA: ENST00000617028.1

SPEG-225, Transcript of SPEG complex locus, human

TSL 5 BASIC

Gene SPEG, Length 815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPEG-225	ENST00000617028	RNF222	A6NCQ9	220 aa		13.23	□□□□□ -0.29
SPEG-225	ENST00000617028	NDUFB4	O95168	129 aa		13.23	□□□□□ -0.29
SPEG-225	ENST00000617028	NBEAP1	P0C6P0	100 aa		13.23	□□□□□ -0.29
SPEG-225	ENST00000617028	PRB4	P10163	310 aa	Predicted RBP	13.23	□□□□□ -0.29
SPEG-225	ENST00000617028	M6PR	P20645	277 aa		13.23	□□□□□ -0.29
SPEG-225	ENST00000617028	NANOS2	P60321	138 aa	Known RBP	13.23	□□□□□ -0.29
SPEG-225	ENST00000617028	HSD17B11	Q8NBQ5	300 aa		13.23	□□□□□ -0.29
SPEG-225	ENST00000617028	RNF141	Q8WVD5	230 aa		13.23	□□□□□ -0.29
SPEG-225	ENST00000617028	RFNG	Q9Y644	331 aa		13.23	□□□□□ -0.29
SPEG-225	ENST00000617028	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.22	□□□□□ -0.29
SPEG-225	ENST00000617028		A0A1W2PPV4	95 aa		13.22	□□□□□ -0.29
SPEG-225	ENST00000617028	TMEM189	A5PLL7	270 aa		13.22	□□□□□ -0.29
SPEG-225	ENST00000617028	PRAC2	D3DTV9	90 aa		13.22	□□□□□ -0.29
SPEG-225	ENST00000617028	OR10J4	P0C629	311 aa		13.22	□□□□□ -0.29
SPEG-225	ENST00000617028	C1orf158	Q8N1D5	194 aa		13.22	□□□□□ -0.29
SPEG-225	ENST00000617028	FXYD5	Q96DB9	178 aa		13.22	□□□□□ -0.29
SPEG-225	ENST00000617028	PSMG3	Q9BT73	122 aa	Predicted RBP	13.22	□□□□□ -0.29
SPEG-225	ENST00000617028	HBE1	P02100	147 aa		13.21	□□□□□ -0.29
SPEG-225	ENST00000617028	UBE2L3	P68036	154 aa	Known RBP	13.21	□□□□□ -0.29
SPEG-225	ENST00000617028	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.21	□□□□□ -0.29
SPEG-225	ENST00000617028	BAP18	Q8IXM2	172 aa		13.21	□□□□□ -0.29
SPEG-225	ENST00000617028	OR10G4	Q8NGN3	311 aa		13.21	□□□□□ -0.29
SPEG-225	ENST00000617028	OR10G9	Q8NGN4	311 aa		13.21	□□□□□ -0.29
SPEG-225	ENST00000617028	OR10G7	Q8NGN6	311 aa		13.21	□□□□□ -0.29
SPEG-225	ENST00000617028	OR2G3	Q8NGZ4	309 aa		13.21	□□□□□ -0.29
SPEG-225	ENST00000617028	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.21	□□□□□ -0.29
SPEG-225	ENST00000617028	KLK5	Q9Y337	293 aa	Predicted RBP	13.21	□□□□□ -0.29
SPEG-225	ENST00000617028	TENM2	Q9NT68	2774 aa		13.21	□□□□□ -0.29
SPEG-225	ENST00000617028	TRAV12-2	A0A075B6T6	113 aa		13.2	□□□□□ -0.3
SPEG-225	ENST00000617028		G3V3Q6	166 aa		13.2	□□□□□ -0.3
SPEG-225	ENST00000617028		M0R3E3	92 aa		13.2	□□□□□ -0.3
SPEG-225	ENST00000617028	CRX	O43186	299 aa	Predicted RBP	13.2	□□□□□ -0.3
SPEG-225	ENST00000617028	ATP6V0C	P27449	155 aa		13.2	□□□□□ -0.3
SPEG-225	ENST00000617028	TSPO	P30536	169 aa		13.2	□□□□□ -0.3
SPEG-225	ENST00000617028	CDKN1B	P46527	198 aa		13.2	□□□□□ -0.3
SPEG-225	ENST00000617028	RAB2A	P61019	212 aa		13.2	□□□□□ -0.3
SPEG-225	ENST00000617028	ICAM4	Q14773	271 aa		13.2	□□□□□ -0.3
SPEG-225	ENST00000617028	FAM122C	Q6P4D5	195 aa		13.2	□□□□□ -0.3
SPEG-225	ENST00000617028	EXOC3-AS1	Q8N2X6	119 aa		13.2	□□□□□ -0.3
SPEG-225	ENST00000617028	NPIPB6	E9PJ23	425 aa		13.19	□□□□□ -0.3
SPEG-225	ENST00000617028	ARPC5	O15511	151 aa		13.19	□□□□□ -0.3
SPEG-225	ENST00000617028	MB	P02144	154 aa		13.19	□□□□□ -0.3
SPEG-225	ENST00000617028	SERF2	P84101	59 aa		13.19	□□□□□ -0.3
SPEG-225	ENST00000617028	RRN3P1	Q2M238	152 aa		13.19	□□□□□ -0.3
SPEG-225	ENST00000617028	TMEM256	Q8N2U0	113 aa		13.19	□□□□□ -0.3
SPEG-225	ENST00000617028	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.19	□□□□□ -0.3
SPEG-225	ENST00000617028	ZNF503	Q96F45	646 aa		13.19	□□□□□ -0.3
SPEG-225	ENST00000617028	LOC102723971	A0A1B0GUV8	181 aa		13.18	□□□□□ -0.3
SPEG-225	ENST00000617028	JTB	O76095	146 aa		13.18	□□□□□ -0.3
SPEG-225	ENST00000617028	LEP	P41159	167 aa		13.18	□□□□□ -0.3
SPEG-225	ENST00000617028	EMP1	P54849	157 aa		13.18	□□□□□ -0.3
SPEG-225	ENST00000617028	RPL7L1	Q6DKI1	246 aa	Known RBP	13.18	□□□□□ -0.3
SPEG-225	ENST00000617028	PQLC2	Q6ZP29	291 aa		13.18	□□□□□ -0.3
SPEG-225	ENST00000617028	LYPD1	Q8N2G4	141 aa		13.18	□□□□□ -0.3
SPEG-225	ENST00000617028	RPP25L	Q8N5L8	163 aa	Known RBP	13.18	□□□□□ -0.3
SPEG-225	ENST00000617028	PHYHIPL	Q96FC7	376 aa		13.18	□□□□□ -0.3
SPEG-225	ENST00000617028	ODF3	Q96PU9	254 aa		13.18	□□□□□ -0.3
SPEG-225	ENST00000617028	SMLR1	H3BR10	107 aa		13.17	□□□□□ -0.3
SPEG-225	ENST00000617028	TAAR5	O14804	337 aa		13.17	□□□□□ -0.3
SPEG-225	ENST00000617028	CDC34	P49427	236 aa	Predicted RBP	13.17	□□□□□ -0.3
SPEG-225	ENST00000617028	SH3BGRL3	Q9H299	93 aa		13.17	□□□□□ -0.3
SPEG-225	ENST00000617028	LCE6A	A0A183	80 aa		13.16	□□□□□ -0.3
SPEG-225	ENST00000617028	TEX48	A0A1B0GUV7	120 aa		13.16	□□□□□ -0.3
SPEG-225	ENST00000617028	C11orf94	C9JXX5	98 aa		13.16	□□□□□ -0.3
SPEG-225	ENST00000617028	SPART-AS1	P0CW21	52 aa		13.16	□□□□□ -0.3
SPEG-225	ENST00000617028	CSN1S1	P47710	185 aa		13.16	□□□□□ -0.3
SPEG-225	ENST00000617028	RAN	P62826	216 aa	Known RBP	13.16	□□□□□ -0.3
SPEG-225	ENST00000617028	LINC01587	Q99440	93 aa		13.16	□□□□□ -0.3
SPEG-225	ENST00000617028	C20orf144	Q9BQM9	153 aa		13.16	□□□□□ -0.3
SPEG-225	ENST00000617028		Q9H3A6	140 aa		13.16	□□□□□ -0.3
SPEG-225	ENST00000617028	CELA1	Q9UNI1	258 aa		13.16	□□□□□ -0.3
SPEG-225	ENST00000617028	EIF3G	O75821	320 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
SPEG-225	ENST00000617028	CT45A10	P0DMU9	189 aa		13.15	□□□□□ -0.3
SPEG-225	ENST00000617028	LINC00477	Q96M19	166 aa		13.15	□□□□□ -0.3
SPEG-225	ENST00000617028	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.15	□□□□□ -0.3
SPEG-225	ENST00000617028	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.14	□□□□□ -0.31
SPEG-225	ENST00000617028	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.14	□□□□□ -0.31
SPEG-225	ENST00000617028	HMGB3	O15347	200 aa	Known RBP	13.14	□□□□□ -0.31
SPEG-225	ENST00000617028	IGKV2D-40	P01614	121 aa	Predicted RBP	13.14	□□□□□ -0.31
SPEG-225	ENST00000617028	ERCC8	Q13216	396 aa		13.14	□□□□□ -0.31
SPEG-225	ENST00000617028	TMEM78	Q5T7P6	136 aa		13.14	□□□□□ -0.31
SPEG-225	ENST00000617028		Q6ZTC4	211 aa		13.14	□□□□□ -0.31
SPEG-225	ENST00000617028	TRAV10	A0A0B4J240	114 aa		13.13	□□□□□ -0.31
SPEG-225	ENST00000617028		H7BYZ3	331 aa		13.13	□□□□□ -0.31
SPEG-225	ENST00000617028		J3KRW8	73 aa		13.13	□□□□□ -0.31
SPEG-225	ENST00000617028	ARL14EPL	P0DKL9	152 aa		13.13	□□□□□ -0.31
SPEG-225	ENST00000617028	TAS2R60	P59551	318 aa		13.13	□□□□□ -0.31
SPEG-225	ENST00000617028	ZNF345	Q14585	488 aa		13.13	□□□□□ -0.31
SPEG-225	ENST00000617028	C12orf74	Q32Q52	190 aa		13.13	□□□□□ -0.31
SPEG-225	ENST00000617028	FAM74A1	Q5RGS3	127 aa		13.13	□□□□□ -0.31
SPEG-225	ENST00000617028	GFI1B	Q5VTD9	330 aa		13.13	□□□□□ -0.31
SPEG-225	ENST00000617028	C9orf47	Q6ZRZ4	202 aa		13.13	□□□□□ -0.31
SPEG-225	ENST00000617028	C2CD4C	Q8TF44	421 aa		13.13	□□□□□ -0.31
SPEG-225	ENST00000617028	RAB24	Q969Q5	203 aa		13.13	□□□□□ -0.31
SPEG-225	ENST00000617028	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.13	□□□□□ -0.31
SPEG-225	ENST00000617028	AGPAT4-IT1	Q9H0P7	198 aa		13.13	□□□□□ -0.31
SPEG-225	ENST00000617028	OTOR	Q9NRC9	128 aa		13.13	□□□□□ -0.31
SPEG-225	ENST00000617028	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.13	□□□□□ -0.31
SPEG-225	ENST00000617028	HMSD	A8MTL9	139 aa		13.12	□□□□□ -0.31
SPEG-225	ENST00000617028	STAG3L2	P0CL84	134 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms