RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 NDUFB3O43676 98 aa11.24□□□□□ -0.61
TNFRSF11A-205ENST00000616710 WT1-ASQ06250 92 aa11.24□□□□□ -0.61
TNFRSF11A-205ENST00000616710 Q86TA4 180 aa11.24□□□□□ -0.61
TNFRSF11A-205ENST00000616710 CITED1Q99966 193 aa11.24□□□□□ -0.61
TNFRSF11A-205ENST00000616710 SPANXB1Q9NS25 103 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF11A-205ENST00000616710 RNF7Q9UBF6 113 aa11.24□□□□□ -0.61
TNFRSF11A-205ENST00000616710 IGKV2-40A0A087WW87 121 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF11A-205ENST00000616710 IGHV3-49A0A0A0MS15 119 aa11.23□□□□□ -0.61
TNFRSF11A-205ENST00000616710 DPM2O94777 84 aa11.23□□□□□ -0.61
TNFRSF11A-205ENST00000616710 IGKV2D-40P01614 121 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF11A-205ENST00000616710 LINC01549A6NIU2 74 aa11.23□□□□□ -0.61
TNFRSF11A-205ENST00000616710 C12orf74Q32Q52 190 aa11.23□□□□□ -0.61
TNFRSF11A-205ENST00000616710 ZFAND6Q6FIF0 208 aa11.23□□□□□ -0.61
TNFRSF11A-205ENST00000616710 C8orf86Q6ZUL3 223 aa11.23□□□□□ -0.61
TNFRSF11A-205ENST00000616710 OSR1Q8TAX0 266 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF11A-205ENST00000616710 IQCF6A8MYZ5 107 aa11.23□□□□□ -0.61
TNFRSF11A-205ENST00000616710 DIAPH2-AS1Q14236 149 aa11.23□□□□□ -0.61
TNFRSF11A-205ENST00000616710 FOXI2Q6ZQN5 318 aa11.23□□□□□ -0.61
TNFRSF11A-205ENST00000616710 CACNG8Q8WXS5 425 aa11.23□□□□□ -0.61
TNFRSF11A-205ENST00000616710 TPSG1Q9NRR2 321 aa11.23□□□□□ -0.61
TNFRSF11A-205ENST00000616710 MSRB1Q9NZV6 116 aa11.23□□□□□ -0.61
TNFRSF11A-205ENST00000616710 KRTAP27-1Q3LI81 207 aa11.22□□□□□ -0.61
TNFRSF11A-205ENST00000616710 MRPL35Q9NZE8 188 aaKnown RBP11.22□□□□□ -0.61
TNFRSF11A-205ENST00000616710 DKK1O94907 266 aa11.22□□□□□ -0.61
TNFRSF11A-205ENST00000616710 GAGE2BQ13066 116 aa11.22□□□□□ -0.61
TNFRSF11A-205ENST00000616710 LGALS9BQ3B8N2 356 aa11.22□□□□□ -0.61
TNFRSF11A-205ENST00000616710 MRPL51Q4U2R6 128 aaKnown RBP11.22□□□□□ -0.61
TNFRSF11A-205ENST00000616710 GAGE2EQ4V326 116 aa11.22□□□□□ -0.61
TNFRSF11A-205ENST00000616710 KLF17Q5JT82 389 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF11A-205ENST00000616710 RNFT1Q5M7Z0 435 aa11.22□□□□□ -0.61
TNFRSF11A-205ENST00000616710 LGALS9CQ6DKI2 356 aa11.22□□□□□ -0.61
TNFRSF11A-205ENST00000616710 GAGE2DQ9UEU5 116 aa11.22□□□□□ -0.61
TNFRSF11A-205ENST00000616710 IGHV3-66A0A0C4DH42 116 aa11.21□□□□□ -0.61
TNFRSF11A-205ENST00000616710 CEND1Q8N111 149 aa11.21□□□□□ -0.61
TNFRSF11A-205ENST00000616710 GCSAMQ8N6F7 178 aa11.21□□□□□ -0.61
TNFRSF11A-205ENST00000616710 RNF138Q8WVD3 245 aa11.21□□□□□ -0.61
TNFRSF11A-205ENST00000616710 RAXQ9Y2V3 346 aa11.21□□□□□ -0.61
TNFRSF11A-205ENST00000616710 FGF6P10767 208 aa11.21□□□□□ -0.61
TNFRSF11A-205ENST00000616710 EFNA4P52798 201 aa11.21□□□□□ -0.61
TNFRSF11A-205ENST00000616710 SPRNQ5BIV9 151 aa11.21□□□□□ -0.61
TNFRSF11A-205ENST00000616710 TMEM133Q9H2Q1 129 aa11.21□□□□□ -0.61
TNFRSF11A-205ENST00000616710 ARHGAP32A7KAX9 2087 aa11.21□□□□□ -0.62
TNFRSF11A-205ENST00000616710 CFAP47Q6ZTR5 3102 aa11.2□□□□□ -0.62
TNFRSF11A-205ENST00000616710 RAX2Q96IS3 184 aa11.2□□□□□ -0.62
TNFRSF11A-205ENST00000616710 SORL1Q92673 2214 aa11.2□□□□□ -0.62
TNFRSF11A-205ENST00000616710 TRAV26-2A0A0B4J265 109 aa11.2□□□□□ -0.62
TNFRSF11A-205ENST00000616710 SPRY2O43597 315 aa11.2□□□□□ -0.62
TNFRSF11A-205ENST00000616710 C11orf53Q8IXP5 236 aa11.2□□□□□ -0.62
TNFRSF11A-205ENST00000616710 OR4C13Q8NGP0 309 aa11.2□□□□□ -0.62
TNFRSF11A-205ENST00000616710 TMEM170BQ5T4T1 132 aa11.19□□□□□ -0.62
TNFRSF11A-205ENST00000616710 WNK1Q9H4A3 2382 aa11.19□□□□□ -0.62
TNFRSF11A-205ENST00000616710 SPG11Q96JI7 2443 aa11.19□□□□□ -0.62
TNFRSF11A-205ENST00000616710 FAM90A9PA6NNJ1 464 aa11.19□□□□□ -0.62
TNFRSF11A-205ENST00000616710 HLA-DRB4P13762 266 aa11.19□□□□□ -0.62
TNFRSF11A-205ENST00000616710 HLA-DRB4X5D2U9 266 aa11.19□□□□□ -0.62
TNFRSF11A-205ENST00000616710 IGKV3D-15A0A087WSY6 115 aa11.19□□□□□ -0.62
TNFRSF11A-205ENST00000616710 HAX1O00165 279 aa11.19□□□□□ -0.62
TNFRSF11A-205ENST00000616710 IGHV4-39P01824 125 aa11.19□□□□□ -0.62
TNFRSF11A-205ENST00000616710 ABHD17AQ96GS6 310 aa11.19□□□□□ -0.62
TNFRSF11A-205ENST00000616710 ONECUT1Q9UBC0 465 aa11.19□□□□□ -0.62
TNFRSF11A-205ENST00000616710 KIR2DL4Q99706 377 aa11.18□□□□□ -0.62
TNFRSF11A-205ENST00000616710 FBXL15Q9H469 300 aa11.18□□□□□ -0.62
TNFRSF11A-205ENST00000616710 ZNF815PA8K554 130 aa11.18□□□□□ -0.62
TNFRSF11A-205ENST00000616710 PRRG2O14669 202 aa11.18□□□□□ -0.62
TNFRSF11A-205ENST00000616710 SCGB1A1P11684 91 aa11.18□□□□□ -0.62
TNFRSF11A-205ENST00000616710 FAM104BQ5XKR9 115 aa11.18□□□□□ -0.62
TNFRSF11A-205ENST00000616710 SCGB3A1Q96QR1 104 aa11.18□□□□□ -0.62
TNFRSF11A-205ENST00000616710 PTPRSQ13332 1948 aa11.18□□□□□ -0.62
TNFRSF11A-205ENST00000616710 A8MWV9 139 aa11.18□□□□□ -0.62
TNFRSF11A-205ENST00000616710 M0R381 172 aa11.18□□□□□ -0.62
TNFRSF11A-205ENST00000616710 HERVK_113P61574 105 aa11.18□□□□□ -0.62
TNFRSF11A-205ENST00000616710 DLX4Q92988 240 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF11A-205ENST00000616710 ASPMQ8IZT6 3477 aa11.18□□□□□ -0.62
TNFRSF11A-205ENST00000616710 SLC25A39Q9BZJ4 359 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF11A-205ENST00000616710 A0A1W2PPI3 338 aa11.17□□□□□ -0.62
TNFRSF11A-205ENST00000616710 EIF4EBP1Q13541 118 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF11A-205ENST00000616710 OTORQ9NRC9 128 aa11.17□□□□□ -0.62
TNFRSF11A-205ENST00000616710 C1orf210Q8IVY1 113 aa11.17□□□□□ -0.62
TNFRSF11A-205ENST00000616710 NACAE9PAV3 2078 aa11.16□□□□□ -0.62
TNFRSF11A-205ENST00000616710 APOBEC3AP31941 199 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF11A-205ENST00000616710 FOXI1Q12951 378 aa11.16□□□□□ -0.62
TNFRSF11A-205ENST00000616710 FAM90A1Q86YD7 464 aa11.16□□□□□ -0.62
TNFRSF11A-205ENST00000616710 IGHV3-64A0A075B6Q5 118 aa11.16□□□□□ -0.62
TNFRSF11A-205ENST00000616710 SH2D1AO60880 128 aa11.16□□□□□ -0.62
TNFRSF11A-205ENST00000616710 IGLV3-19P01714 112 aa11.16□□□□□ -0.62
TNFRSF11A-205ENST00000616710 GAGE5Q13069 117 aa11.16□□□□□ -0.62
TNFRSF11A-205ENST00000616710 GAGE6Q13070 117 aa11.16□□□□□ -0.62
TNFRSF11A-205ENST00000616710 IGFBPL1Q8WX77 278 aa11.16□□□□□ -0.62
TNFRSF11A-205ENST00000616710 MUC22E2RYF6 1773 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF11A-205ENST00000616710 TMEM155Q4W5P6 130 aa11.16□□□□□ -0.62
TNFRSF11A-205ENST00000616710 SHISA2Q6UWI4 295 aa11.16□□□□□ -0.62
TNFRSF11A-205ENST00000616710 ZFP2Q6ZN57 461 aa11.16□□□□□ -0.62
TNFRSF11A-205ENST00000616710 C1QTNF4Q9BXJ3 329 aa11.16□□□□□ -0.62
TNFRSF11A-205ENST00000616710 CNTFRP26992 372 aa11.15□□□□□ -0.62
TNFRSF11A-205ENST00000616710 BOD1L1Q8NFC6 3051 aa11.15□□□□□ -0.62
TNFRSF11A-205ENST00000616710 GAS8-AS1O95177 125 aa11.15□□□□□ -0.62
TNFRSF11A-205ENST00000616710 XGP55808 180 aa11.15□□□□□ -0.62
TNFRSF11A-205ENST00000616710 NGBQ9NPG2 151 aa11.15□□□□□ -0.62
TNFRSF11A-205ENST00000616710 SRRM5B3KS81 715 aa11.15□□□□□ -0.63
TNFRSF11A-205ENST00000616710 ATP5LO75964 103 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms