RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 SPINK13Q1W4C9 94 aa7.69□□□□□ -1.18
TNFRSF9-204ENST00000615230 CSTL1Q9H114 145 aa7.69□□□□□ -1.18
TNFRSF9-204ENST00000615230 IGHV1-24A0A0C4DH33 117 aa7.69□□□□□ -1.18
TNFRSF9-204ENST00000615230 TNFRSF6BO95407 300 aa7.69□□□□□ -1.18
TNFRSF9-204ENST00000615230 LINC00614P0C842 121 aa7.69□□□□□ -1.18
TNFRSF9-204ENST00000615230 MRPL23Q16540 153 aaKnown RBP7.69□□□□□ -1.18
TNFRSF9-204ENST00000615230 NINQ8N4C6 2090 aa7.69□□□□□ -1.18
TNFRSF9-204ENST00000615230 MYMXA0A1B0GTQ4 84 aa7.69□□□□□ -1.18
TNFRSF9-204ENST00000615230 LY6G5BQ8NDX9 201 aa7.69□□□□□ -1.18
TNFRSF9-204ENST00000615230 OCC1Q8TAD7 63 aa7.69□□□□□ -1.18
TNFRSF9-204ENST00000615230 MRAPQ8TCY5 172 aa7.69□□□□□ -1.18
TNFRSF9-204ENST00000615230 H7C2G1 150 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 NDUFA3O95167 84 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 C6orf226Q5I0X4 101 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 LIME1Q9H400 295 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 LOC107984156A0A0G2JMH3 177 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 GAGE12BA1L429 117 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 KNCNA6PVL3 124 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 GAGE7O76087 117 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 GAGE12FP0CL80 117 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 GAGE12GP0CL81 117 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 GAGE12IP0CL82 117 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 ARL17AQ8IVW1 177 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 KNTC1P50748 2209 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 IGHV7-81A0A0B4J1V7 117 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 CGB3P0DN86 165 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 ZNF48Q96MX3 618 aaPredicted RBP7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 C18orf15Q96N68 181 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 IGHV3-73A0A0B4J1V6 119 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 PRR31Q5SQ13 230 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 TMEM170AQ8WVE7 144 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 LSM4Q9Y4Z0 139 aaKnown RBP7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 INS-IGF2F8WCM5 200 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 IGLC1P0CG04 106 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 FOXA3P55318 350 aaPredicted RBP7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 Q6ZWC4 215 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 C1orf147Q96MC9 270 aaPredicted RBP7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 CABIN1Q9Y6J0 2220 aa7.68□□□□□ -1.18
TNFRSF9-204ENST00000615230 H0YIZ8 118 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 PIFOQ8TCI5 191 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 EDA2RQ9HAV5 297 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 NUP210LQ5VU65 1888 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 KIAA1644Q3SXP7 199 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 RPP25LQ8N5L8 163 aaKnown RBP7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 PGPEP1Q9NXJ5 209 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 PAM16Q9Y3D7 125 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 ZNF815PA8K554 130 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 C19orf84I3L1E1 186 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 COL5A1-AS1Q5SY13 56 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 VPS25Q9BRG1 176 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 CST9LQ9H4G1 147 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 JPT2Q9H910 190 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 MUC21A0A0G2JKD1 596 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 MUC21A0A140T8X8 626 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 SPATA25Q9BR10 227 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 ADAMTS9Q9P2N4 1935 aa7.67□□□□□ -1.18
TNFRSF9-204ENST00000615230 NOTCH4Q99466 2003 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 GAGE12JA6NER3 117 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 GAGE1Q13065 139 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 GAGE4Q13068 117 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 GAGE5Q13069 117 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 GAGE13Q4V321 117 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 Q8N9W7 124 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 IGLV11-55A0A075B6I3 123 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 LY6G6DO95868 133 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 ARMS2P0C7Q2 107 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 SLURP1P55000 103 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 WT1-ASQ06250 92 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 C11orf71Q6IPW1 123 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 ODF3BA8MYP8 253 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 CRYGCP07315 174 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 ZFP36P26651 326 aaKnown RBP7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 NKAPP1Q8N9T2 125 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 VSIRQ9H7M9 311 aa7.66□□□□□ -1.18
TNFRSF9-204ENST00000615230 LGALS9O00182 355 aa7.65□□□□□ -1.18
TNFRSF9-204ENST00000615230 Q5BKY6 102 aa7.65□□□□□ -1.18
TNFRSF9-204ENST00000615230 C16orf54Q6UWD8 224 aa7.65□□□□□ -1.18
TNFRSF9-204ENST00000615230 ZNF491Q8N8L2 437 aa7.65□□□□□ -1.18
TNFRSF9-204ENST00000615230 Q8TAT8 98 aa7.65□□□□□ -1.18
TNFRSF9-204ENST00000615230 NRGNQ92686 78 aa7.65□□□□□ -1.18
TNFRSF9-204ENST00000615230 MRPL16Q9NX20 251 aaKnown RBP7.65□□□□□ -1.18
TNFRSF9-204ENST00000615230 TRAV2A0A0B4J234 112 aa7.65□□□□□ -1.18
TNFRSF9-204ENST00000615230 IGLC7A0M8Q6 106 aa7.65□□□□□ -1.18
TNFRSF9-204ENST00000615230 LEPROTO15243 131 aa7.65□□□□□ -1.18
TNFRSF9-204ENST00000615230 SCGB1A1P11684 91 aa7.65□□□□□ -1.18
TNFRSF9-204ENST00000615230 C14orf177Q52M58 125 aa7.65□□□□□ -1.18
TNFRSF9-204ENST00000615230 C14orf178Q8N769 122 aaPredicted RBP7.65□□□□□ -1.18
TNFRSF9-204ENST00000615230 HEATR5BQ9P2D3 2071 aa7.65□□□□□ -1.18
TNFRSF9-204ENST00000615230 MMP23AO75900 390 aa7.65□□□□□ -1.18
TNFRSF9-204ENST00000615230 C10orf142B7Z368 130 aa7.65□□□□□ -1.19
TNFRSF9-204ENST00000615230 K7EMI3 77 aa7.65□□□□□ -1.19
TNFRSF9-204ENST00000615230 HILS1P60008 231 aa7.65□□□□□ -1.19
TNFRSF9-204ENST00000615230 RNF144BQ7Z419 303 aa7.65□□□□□ -1.19
TNFRSF9-204ENST00000615230 LMO4P61968 165 aa7.65□□□□□ -1.19
TNFRSF9-204ENST00000615230 SMIM9A6NGZ8 99 aa7.64□□□□□ -1.19
TNFRSF9-204ENST00000615230 C2orf70A6NJV1 201 aa7.64□□□□□ -1.19
TNFRSF9-204ENST00000615230 COL4A3Q01955 1670 aa7.64□□□□□ -1.19
TNFRSF9-204ENST00000615230 IGHV4OR15-8A0A075B7B6 117 aa7.64□□□□□ -1.19
TNFRSF9-204ENST00000615230 A0A087WW49 117 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms