RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 C11orf52Q96A22 123 aa13.19□□□□□ -0.3
SREK1-216ENST00000612404 PARLQ9H300 379 aa13.19□□□□□ -0.3
SREK1-216ENST00000612404 ISLRO14498 428 aa13.19□□□□□ -0.3
SREK1-216ENST00000612404 TCRAP04437 139 aa13.19□□□□□ -0.3
SREK1-216ENST00000612404 ID1P41134 155 aa13.19□□□□□ -0.3
SREK1-216ENST00000612404 GOLT1AQ6ZVE7 132 aa13.19□□□□□ -0.3
SREK1-216ENST00000612404 ATG101Q9BSB4 218 aa13.19□□□□□ -0.3
SREK1-216ENST00000612404 NOTCH3Q9UM47 2321 aa13.19□□□□□ -0.3
SREK1-216ENST00000612404 KRBOX1C9JBD0 128 aa13.18□□□□□ -0.3
SREK1-216ENST00000612404 TSPAN4O14817 238 aa13.18□□□□□ -0.3
SREK1-216ENST00000612404 ADCYAP1P18509 176 aa13.18□□□□□ -0.3
SREK1-216ENST00000612404 AKR1C3P42330 323 aa13.18□□□□□ -0.3
SREK1-216ENST00000612404 SAMD13Q5VXD3 122 aa13.18□□□□□ -0.3
SREK1-216ENST00000612404 LCN12Q6JVE5 192 aa13.18□□□□□ -0.3
SREK1-216ENST00000612404 SPATA3Q8NHX4 192 aa13.18□□□□□ -0.3
SREK1-216ENST00000612404 LINC00479Q96M42 142 aa13.18□□□□□ -0.3
SREK1-216ENST00000612404 PRELID1Q9Y255 219 aa13.18□□□□□ -0.3
SREK1-216ENST00000612404 ANK2Q01484 3957 aa13.18□□□□□ -0.3
SREK1-216ENST00000612404 CD33P20138 364 aa13.18□□□□□ -0.3
SREK1-216ENST00000612404 ZNF738Q8NE65 137 aa13.18□□□□□ -0.3
SREK1-216ENST00000612404 C2CD4CQ8TF44 421 aa13.18□□□□□ -0.3
SREK1-216ENST00000612404 C20orf173Q96LM9 149 aa13.18□□□□□ -0.3
SREK1-216ENST00000612404 SMIM7Q9BQ49 75 aa13.18□□□□□ -0.3
SREK1-216ENST00000612404 CLEC5AQ9NY25 188 aa13.18□□□□□ -0.3
SREK1-216ENST00000612404 TRAV34A0A0B4J273 112 aa13.17□□□□□ -0.3
SREK1-216ENST00000612404 IZUMO1RA6ND01 250 aa13.17□□□□□ -0.3
SREK1-216ENST00000612404 ZNF727A8MUV8 499 aa13.17□□□□□ -0.3
SREK1-216ENST00000612404 DIRC3C9JPN6 131 aa13.17□□□□□ -0.3
SREK1-216ENST00000612404 K7EQG2 157 aa13.17□□□□□ -0.3
SREK1-216ENST00000612404 RPL35P42766 123 aaKnown RBP13.17□□□□□ -0.3
SREK1-216ENST00000612404 CNN1P51911 297 aaKnown RBP13.17□□□□□ -0.3
SREK1-216ENST00000612404 PSG3Q16557 428 aa13.17□□□□□ -0.3
SREK1-216ENST00000612404 FAM24BQ8N5W8 94 aa13.17□□□□□ -0.3
SREK1-216ENST00000612404 SGK494Q96LW2 274 aa13.17□□□□□ -0.3
SREK1-216ENST00000612404 SEC11CQ9BY50 192 aa13.17□□□□□ -0.3
SREK1-216ENST00000612404 SORL1Q92673 2214 aa13.16□□□□□ -0.3
SREK1-216ENST00000612404 ZNF688P0C7X2 276 aa13.16□□□□□ -0.3
SREK1-216ENST00000612404 SNRPD3P62318 126 aaKnown RBP13.16□□□□□ -0.3
SREK1-216ENST00000612404 GUCA2BQ16661 112 aa13.16□□□□□ -0.3
SREK1-216ENST00000612404 TRAV25A0A0B4J276 109 aa13.16□□□□□ -0.3
SREK1-216ENST00000612404 K7EQM0 130 aa13.16□□□□□ -0.3
SREK1-216ENST00000612404 IGKV2-40A0A087WW87 121 aaPredicted RBP13.15□□□□□ -0.3
SREK1-216ENST00000612404 PRAC2D3DTV9 90 aa13.15□□□□□ -0.3
SREK1-216ENST00000612404 IGKV2D-40P01614 121 aaPredicted RBP13.15□□□□□ -0.3
SREK1-216ENST00000612404 IGLV1-51P01701 117 aa13.15□□□□□ -0.3
SREK1-216ENST00000612404 UBE2G1P62253 170 aa13.15□□□□□ -0.3
SREK1-216ENST00000612404 MDFIQ99750 246 aa13.15□□□□□ -0.3
SREK1-216ENST00000612404 TRAV8-1A0A0A6YYK1 113 aa13.15□□□□□ -0.3
SREK1-216ENST00000612404 APOC3P02656 99 aa13.15□□□□□ -0.3
SREK1-216ENST00000612404 PSMG4Q5JS54 123 aa13.15□□□□□ -0.3
SREK1-216ENST00000612404 MRPL53Q96EL3 112 aaKnown RBP13.15□□□□□ -0.3
SREK1-216ENST00000612404 SPAG8Q99932 426 aaPredicted RBP13.15□□□□□ -0.3
SREK1-216ENST00000612404 NIPSNAP3BQ9BS92 247 aa13.15□□□□□ -0.3
SREK1-216ENST00000612404 PKD1L1Q8TDX9 2849 aa13.14□□□□□ -0.31
SREK1-216ENST00000612404 OR4C46A6NHA9 309 aa13.14□□□□□ -0.31
SREK1-216ENST00000612404 S100A1P23297 94 aa13.14□□□□□ -0.31
SREK1-216ENST00000612404 FAM74A3Q4VXF1 159 aa13.14□□□□□ -0.31
SREK1-216ENST00000612404 ARL6IP6Q8N6S5 226 aa13.14□□□□□ -0.31
SREK1-216ENST00000612404 DEFB1P60022 68 aa13.13□□□□□ -0.31
SREK1-216ENST00000612404 C9orf66Q5T8R8 295 aa13.13□□□□□ -0.31
SREK1-216ENST00000612404 TRAV2A0A0B4J234 112 aa13.13□□□□□ -0.31
SREK1-216ENST00000612404 C10orf91Q5T1B1 145 aa13.13□□□□□ -0.31
SREK1-216ENST00000612404 FMC1Q96HJ9 113 aa13.13□□□□□ -0.31
SREK1-216ENST00000612404 TRBV20OR9-2A0A075B6H5 130 aa13.12□□□□□ -0.31
SREK1-216ENST00000612404 SERTM2A0A1B0GWG4 89 aa13.12□□□□□ -0.31
SREK1-216ENST00000612404 GNG4P50150 75 aa13.12□□□□□ -0.31
SREK1-216ENST00000612404 TMEM183BQ1AE95 376 aa13.12□□□□□ -0.31
SREK1-216ENST00000612404 CENPWQ5EE01 88 aa13.12□□□□□ -0.31
SREK1-216ENST00000612404 OR2K2Q8NGT1 345 aa13.12□□□□□ -0.31
SREK1-216ENST00000612404 CARHSP1Q9Y2V2 147 aaKnown RBP13.12□□□□□ -0.31
SREK1-216ENST00000612404 KLF12Q9Y4X4 402 aa13.12□□□□□ -0.31
SREK1-216ENST00000612404 PGPEP1LA6NFU8 196 aa13.12□□□□□ -0.31
SREK1-216ENST00000612404 ZNF705DP0CH99 300 aaPredicted RBP13.12□□□□□ -0.31
SREK1-216ENST00000612404 ZNF705BP0CI00 300 aaPredicted RBP13.12□□□□□ -0.31
SREK1-216ENST00000612404 INSL3P51460 131 aa13.12□□□□□ -0.31
SREK1-216ENST00000612404 TMEM241Q24JQ0 296 aa13.12□□□□□ -0.31
SREK1-216ENST00000612404 PRNTQ86SH4 94 aa13.12□□□□□ -0.31
SREK1-216ENST00000612404 TMEM75Q8N9X5 138 aa13.12□□□□□ -0.31
SREK1-216ENST00000612404 WFDC9Q8NEX5 89 aa13.12□□□□□ -0.31
SREK1-216ENST00000612404 VGLL1Q99990 258 aa13.12□□□□□ -0.31
SREK1-216ENST00000612404 MCRIP2Q9BUT9 160 aaKnown RBP13.12□□□□□ -0.31
SREK1-216ENST00000612404 F6UB75 175 aa13.11□□□□□ -0.31
SREK1-216ENST00000612404 S100A9P06702 114 aaKnown RBP13.11□□□□□ -0.31
SREK1-216ENST00000612404 TAS2R60P59551 318 aa13.11□□□□□ -0.31
SREK1-216ENST00000612404 ERCC8Q13216 396 aa13.11□□□□□ -0.31
SREK1-216ENST00000612404 AURKAIP1Q9NWT8 199 aaPredicted RBP13.11□□□□□ -0.31
SREK1-216ENST00000612404 NAT8Q9UHE5 227 aa13.11□□□□□ -0.31
SREK1-216ENST00000612404 ZNF256Q9Y2P7 627 aaPredicted RBP13.11□□□□□ -0.31
SREK1-216ENST00000612404 IGLV2-11P01706 119 aa13.1□□□□□ -0.31
SREK1-216ENST00000612404 FLI1Q01543 452 aaPredicted RBP13.1□□□□□ -0.31
SREK1-216ENST00000612404 OR10J6PQ8NGY7 276 aa13.1□□□□□ -0.31
SREK1-216ENST00000612404 ASCL2Q99929 193 aa13.1□□□□□ -0.31
SREK1-216ENST00000612404 IGLL1P15814 213 aa13.1□□□□□ -0.31
SREK1-216ENST00000612404 BAGE2Q86Y30 109 aa13.1□□□□□ -0.31
SREK1-216ENST00000612404 NHLRC2Q8NBF2 726 aa13.1□□□□□ -0.31
SREK1-216ENST00000612404 IGF2BP2-AS1Q96M15 143 aa13.1□□□□□ -0.31
SREK1-216ENST00000612404 PSG8Q9UQ74 426 aa13.1□□□□□ -0.31
SREK1-216ENST00000612404 CMYA5Q8N3K9 4069 aa13.09□□□□□ -0.31
SREK1-216ENST00000612404 RBAKDNA6NC62 111 aa13.09□□□□□ -0.31
SREK1-216ENST00000612404 DEFB131AP59861 70 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms