RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 DPM3Q9P2X0 92 aa11.04□□□□□ -0.64
COL6A1-207ENST00000612273 HSPB8Q9UJY1 196 aa11.04□□□□□ -0.64
COL6A1-207ENST00000612273 ZFHX3Q15911 3703 aa11.04□□□□□ -0.64
COL6A1-207ENST00000612273 LOC105371242A0A075B767 164 aa11.04□□□□□ -0.64
COL6A1-207ENST00000612273 CACNG7P62955 275 aa11.04□□□□□ -0.64
COL6A1-207ENST00000612273 BVES-AS1Q5T3Y7 98 aa11.04□□□□□ -0.64
COL6A1-207ENST00000612273 RAB37Q96AX2 223 aa11.04□□□□□ -0.64
COL6A1-207ENST00000612273 VGLL1Q99990 258 aa11.04□□□□□ -0.64
COL6A1-207ENST00000612273 C1RLQ9NZP8 487 aa11.04□□□□□ -0.64
COL6A1-207ENST00000612273 CUBNO60494 3623 aa11.03□□□□□ -0.64
COL6A1-207ENST00000612273 HAX1O00165 279 aa11.03□□□□□ -0.64
COL6A1-207ENST00000612273 GAS8-AS1O95177 125 aa11.03□□□□□ -0.64
COL6A1-207ENST00000612273 EVI2AP22794 236 aa11.03□□□□□ -0.64
COL6A1-207ENST00000612273 CSN1S1P47710 185 aa11.03□□□□□ -0.64
COL6A1-207ENST00000612273 ECSCRQ19T08 205 aa11.03□□□□□ -0.64
COL6A1-207ENST00000612273 PRELID3AQ96N28 172 aa11.03□□□□□ -0.64
COL6A1-207ENST00000612273 SH2D1AO60880 128 aa11.03□□□□□ -0.64
COL6A1-207ENST00000612273 NMUP48645 174 aa11.03□□□□□ -0.64
COL6A1-207ENST00000612273 ERCC8Q13216 396 aa11.03□□□□□ -0.64
COL6A1-207ENST00000612273 CT83Q5H943 113 aa11.03□□□□□ -0.64
COL6A1-207ENST00000612273 DYNAPQ8N1N2 210 aa11.03□□□□□ -0.64
COL6A1-207ENST00000612273 ST20Q9HBF5 79 aa11.03□□□□□ -0.64
COL6A1-207ENST00000612273 H3BRN7 92 aa11.03□□□□□ -0.64
COL6A1-207ENST00000612273 S100A7P31151 101 aa11.03□□□□□ -0.64
COL6A1-207ENST00000612273 RNF182Q8N6D2 247 aa11.03□□□□□ -0.64
COL6A1-207ENST00000612273 DOPEY2Q9Y3R5 2298 aa11.02□□□□□ -0.64
COL6A1-207ENST00000612273 PLP1P60201 277 aa11.02□□□□□ -0.65
COL6A1-207ENST00000612273 ANKRD39Q53RE8 183 aa11.02□□□□□ -0.65
COL6A1-207ENST00000612273 FAM162BQ5T6X4 162 aa11.02□□□□□ -0.65
COL6A1-207ENST00000612273 OR10AG1Q8NH19 301 aa11.02□□□□□ -0.65
COL6A1-207ENST00000612273 ZNF747Q9BV97 191 aa11.02□□□□□ -0.65
COL6A1-207ENST00000612273 TTTY13Q9BZ97 58 aa11.02□□□□□ -0.65
COL6A1-207ENST00000612273 SIGLEC8Q9NYZ4 499 aa11.02□□□□□ -0.65
COL6A1-207ENST00000612273 CKS2P33552 79 aa11.02□□□□□ -0.65
COL6A1-207ENST00000612273 SOX21Q9Y651 276 aaPredicted RBP11.02□□□□□ -0.65
COL6A1-207ENST00000612273 NPIPB6E9PJ23 425 aa11.01□□□□□ -0.65
COL6A1-207ENST00000612273 TAX1BP3O14907 124 aa11.01□□□□□ -0.65
COL6A1-207ENST00000612273 SPRY2O43597 315 aa11.01□□□□□ -0.65
COL6A1-207ENST00000612273 ZNF80P51504 273 aaPredicted RBP11.01□□□□□ -0.65
COL6A1-207ENST00000612273 C8orf31Q8N9H6 132 aa11.01□□□□□ -0.65
COL6A1-207ENST00000612273 GFRA4Q9GZZ7 299 aa11.01□□□□□ -0.65
COL6A1-207ENST00000612273 LINC00527Q9UJ94 153 aa11.01□□□□□ -0.65
COL6A1-207ENST00000612273 EGR2P11161 476 aaPredicted RBP11.01□□□□□ -0.65
COL6A1-207ENST00000612273 GATA1P15976 413 aaPredicted RBP11.01□□□□□ -0.65
COL6A1-207ENST00000612273 GPR183P32249 361 aa11.01□□□□□ -0.65
COL6A1-207ENST00000612273 TCF15Q12870 199 aa11.01□□□□□ -0.65
COL6A1-207ENST00000612273 C21orf62Q9NYP8 219 aa11.01□□□□□ -0.65
COL6A1-207ENST00000612273 THYN1Q9P016 225 aa11.01□□□□□ -0.65
COL6A1-207ENST00000612273 FANCD2OSQ96PS1 177 aa11.01□□□□□ -0.65
COL6A1-207ENST00000612273 MFAP4P55083 255 aa11□□□□□ -0.65
COL6A1-207ENST00000612273 RHOGP84095 191 aa11□□□□□ -0.65
COL6A1-207ENST00000612273 SMIM12Q96EX1 92 aa11□□□□□ -0.65
COL6A1-207ENST00000612273 K7EMI3 77 aa11□□□□□ -0.65
COL6A1-207ENST00000612273 NPYP01303 97 aa11□□□□□ -0.65
COL6A1-207ENST00000612273 PET117Q6UWS5 81 aa11□□□□□ -0.65
COL6A1-207ENST00000612273 SCRT2Q9NQ03 307 aa11□□□□□ -0.65
COL6A1-207ENST00000612273 TMEM14CQ9P0S9 112 aa11□□□□□ -0.65
COL6A1-207ENST00000612273 CENPEQ02224 2701 aa10.99□□□□□ -0.65
COL6A1-207ENST00000612273 IGHV3OR16-10A0A075B7F0 116 aa10.99□□□□□ -0.65
COL6A1-207ENST00000612273 TRAV8-6A0A0B4J262 113 aa10.99□□□□□ -0.65
COL6A1-207ENST00000612273 C5orf64Q2M2E5 130 aa10.99□□□□□ -0.65
COL6A1-207ENST00000612273 DEFB104AQ8WTQ1 72 aa10.99□□□□□ -0.65
COL6A1-207ENST00000612273 ARPC1AQ92747 370 aa10.99□□□□□ -0.65
COL6A1-207ENST00000612273 CRXO43186 299 aaPredicted RBP10.99□□□□□ -0.65
COL6A1-207ENST00000612273 PSG9Q00887 426 aa10.99□□□□□ -0.65
COL6A1-207ENST00000612273 TNFRSF14Q92956 283 aa10.99□□□□□ -0.65
COL6A1-207ENST00000612273 VPS25Q9BRG1 176 aa10.99□□□□□ -0.65
COL6A1-207ENST00000612273 JKAMPQ9P055 326 aa10.99□□□□□ -0.65
COL6A1-207ENST00000612273 PRAC2D3DTV9 90 aa10.99□□□□□ -0.65
COL6A1-207ENST00000612273 MRPL51Q4U2R6 128 aaKnown RBP10.99□□□□□ -0.65
COL6A1-207ENST00000612273 OVOL3O00110 214 aa10.98□□□□□ -0.65
COL6A1-207ENST00000612273 SORL1Q92673 2214 aa10.98□□□□□ -0.65
COL6A1-207ENST00000612273 PVRIGQ6DKI7 326 aa10.98□□□□□ -0.65
COL6A1-207ENST00000612273 C12orf54Q6X4T0 127 aa10.98□□□□□ -0.65
COL6A1-207ENST00000612273 Q6ZQT7 251 aa10.98□□□□□ -0.65
COL6A1-207ENST00000612273 PCP2Q8IVA1 136 aa10.98□□□□□ -0.65
COL6A1-207ENST00000612273 ORMDL3Q8N138 153 aa10.98□□□□□ -0.65
COL6A1-207ENST00000612273 DKK2Q9UBU2 259 aa10.98□□□□□ -0.65
COL6A1-207ENST00000612273 IGKV3-7A0A075B6H7 116 aa10.97□□□□□ -0.65
COL6A1-207ENST00000612273 A0A096LNJ9 63 aa10.97□□□□□ -0.65
COL6A1-207ENST00000612273 IGHV2-70DA0A0C4DH43 119 aa10.97□□□□□ -0.65
COL6A1-207ENST00000612273 C7orf71A4D174 169 aa10.97□□□□□ -0.65
COL6A1-207ENST00000612273 K7EP13 123 aa10.97□□□□□ -0.65
COL6A1-207ENST00000612273 NOTCH3Q9UM47 2321 aa10.97□□□□□ -0.65
COL6A1-207ENST00000612273 FAM231BA6NCW3 169 aa10.97□□□□□ -0.65
COL6A1-207ENST00000612273 RBX1P62877 108 aa10.97□□□□□ -0.65
COL6A1-207ENST00000612273 FAM104BQ5XKR9 115 aa10.97□□□□□ -0.65
COL6A1-207ENST00000612273 FER1L6-AS1Q8NA97 138 aa10.97□□□□□ -0.65
COL6A1-207ENST00000612273 TIMD4Q96H15 378 aa10.97□□□□□ -0.65
COL6A1-207ENST00000612273 PRR25Q96S07 402 aa10.97□□□□□ -0.65
COL6A1-207ENST00000612273 USP9YO00507 2555 aaPredicted RBP10.96□□□□□ -0.65
COL6A1-207ENST00000612273 G3V318 75 aa10.96□□□□□ -0.65
COL6A1-207ENST00000612273 LY6LH3BQJ8 138 aa10.96□□□□□ -0.65
COL6A1-207ENST00000612273 LINC01545Q5VT33 79 aa10.96□□□□□ -0.65
COL6A1-207ENST00000612273 IGF2-ASQ6U949 168 aa10.96□□□□□ -0.65
COL6A1-207ENST00000612273 RABAC1Q9UI14 185 aa10.96□□□□□ -0.65
COL6A1-207ENST00000612273 CLEC3BP05452 202 aa10.96□□□□□ -0.66
COL6A1-207ENST00000612273 CEACAM3P40198 252 aa10.96□□□□□ -0.66
COL6A1-207ENST00000612273 PRSS1P07477 247 aa10.96□□□□□ -0.66
COL6A1-207ENST00000612273 VMO1Q7Z5L0 202 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms