RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 NHLRC2Q8NBF2 726 aa9.35□□□□□ -0.91
CBWD1-220ENST00000612045 OR11H1Q8NG94 326 aa9.35□□□□□ -0.91
CBWD1-220ENST00000612045 SFRP2Q96HF1 295 aa9.35□□□□□ -0.91
CBWD1-220ENST00000612045 TRAV8-1A0A0A6YYK1 113 aa9.35□□□□□ -0.91
CBWD1-220ENST00000612045 H7BYZ3 331 aa9.35□□□□□ -0.91
CBWD1-220ENST00000612045 GCGP01275 180 aa9.35□□□□□ -0.91
CBWD1-220ENST00000612045 LTAP01374 205 aa9.35□□□□□ -0.91
CBWD1-220ENST00000612045 IGLV2-11P01706 119 aa9.35□□□□□ -0.91
CBWD1-220ENST00000612045 PRB4P10163 310 aaPredicted RBP9.35□□□□□ -0.91
CBWD1-220ENST00000612045 OR5I1Q13606 314 aa9.35□□□□□ -0.91
CBWD1-220ENST00000612045 KLF5Q13887 457 aaPredicted RBP9.35□□□□□ -0.91
CBWD1-220ENST00000612045 C15orf54Q8N8G6 183 aa9.35□□□□□ -0.91
CBWD1-220ENST00000612045 TMEM75Q8N9X5 138 aa9.35□□□□□ -0.91
CBWD1-220ENST00000612045 OR1N2Q8NGR9 330 aa9.35□□□□□ -0.91
CBWD1-220ENST00000612045 DPF1Q92782 380 aa9.35□□□□□ -0.91
CBWD1-220ENST00000612045 RNF114Q9Y508 228 aa9.35□□□□□ -0.91
CBWD1-220ENST00000612045 TRAV8-2A0A0B4J237 113 aa9.34□□□□□ -0.91
CBWD1-220ENST00000612045 COLCA2A8K830 154 aa9.34□□□□□ -0.91
CBWD1-220ENST00000612045 K7EQM0 130 aa9.34□□□□□ -0.91
CBWD1-220ENST00000612045 MGST1P10620 155 aaKnown RBP9.34□□□□□ -0.91
CBWD1-220ENST00000612045 SLURP1P55000 103 aa9.34□□□□□ -0.91
CBWD1-220ENST00000612045 RNF182Q8N6D2 247 aa9.34□□□□□ -0.91
CBWD1-220ENST00000612045 NIPBLQ6KC79 2804 aaeCLIP9.34□□□□□ -0.91
CBWD1-220ENST00000612045 TRBV6-1A0A0K0K1D8 114 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 SERTM2A0A1B0GWG4 89 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 ZNF705FA8MVS1 300 aaPredicted RBP9.33□□□□□ -0.92
CBWD1-220ENST00000612045 PPP1R2P9O14990 202 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 BMI1P35226 326 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 PROK1P58294 105 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 RPL11P62913 178 aaKnown RBP9.33□□□□□ -0.92
CBWD1-220ENST00000612045 SRSF2Q01130 221 aaKnown RBP9.33□□□□□ -0.92
CBWD1-220ENST00000612045 PSG3Q16557 428 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 LCN12Q6JVE5 192 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 PRNTQ86SH4 94 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 Q86TA4 180 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 FAM24BQ8N5W8 94 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 SMIM12Q96EX1 92 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 C16orf92Q96LL3 132 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 YPEL4Q96NS1 127 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 DUX3Q96PT4 197 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 CITED2Q99967 270 aaPredicted RBP9.33□□□□□ -0.92
CBWD1-220ENST00000612045 MLST8Q9BVC4 326 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 TSSC4Q9Y5U2 329 aaPredicted RBP9.33□□□□□ -0.92
CBWD1-220ENST00000612045 URGCP-MRPS24S4R325 110 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 ERVFC1-1P60608 527 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 FLI1Q01543 452 aaPredicted RBP9.33□□□□□ -0.92
CBWD1-220ENST00000612045 ELOBQ15370 118 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 OR10G8Q8NGN5 311 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 NRN1Q9NPD7 142 aa9.33□□□□□ -0.92
CBWD1-220ENST00000612045 C2CD3Q4AC94 2353 aa9.32□□□□□ -0.92
CBWD1-220ENST00000612045 IGKV2-40A0A087WW87 121 aaPredicted RBP9.32□□□□□ -0.92
CBWD1-220ENST00000612045 C2orf70A6NJV1 201 aa9.32□□□□□ -0.92
CBWD1-220ENST00000612045 SOCS3O14543 225 aa9.32□□□□□ -0.92
CBWD1-220ENST00000612045 IGKV2D-40P01614 121 aaPredicted RBP9.32□□□□□ -0.92
CBWD1-220ENST00000612045 CBLN1P23435 193 aa9.32□□□□□ -0.92
CBWD1-220ENST00000612045 TCF24Q7RTU0 167 aa9.32□□□□□ -0.92
CBWD1-220ENST00000612045 MRPL53Q96EL3 112 aaKnown RBP9.32□□□□□ -0.92
CBWD1-220ENST00000612045 RNASE7Q9H1E1 156 aaKnown RBP9.32□□□□□ -0.92
CBWD1-220ENST00000612045 CLEC5AQ9NY25 188 aa9.32□□□□□ -0.92
CBWD1-220ENST00000612045 PSG8Q9UQ74 426 aa9.32□□□□□ -0.92
CBWD1-220ENST00000612045 SELENOKQ9Y6D0 94 aa9.32□□□□□ -0.92
CBWD1-220ENST00000612045 IGKV3-7A0A075B6H7 116 aa9.31□□□□□ -0.92
CBWD1-220ENST00000612045 A0A1W2PRX2 142 aa9.31□□□□□ -0.92
CBWD1-220ENST00000612045 CYSRT1A8MQ03 144 aa9.31□□□□□ -0.92
CBWD1-220ENST00000612045 PRAC2D3DTV9 90 aa9.31□□□□□ -0.92
CBWD1-220ENST00000612045 TMEM183AQ8IXX5 376 aa9.31□□□□□ -0.92
CBWD1-220ENST00000612045 RAX2Q96IS3 184 aa9.31□□□□□ -0.92
CBWD1-220ENST00000612045 OSTCQ9NRP0 149 aa9.31□□□□□ -0.92
CBWD1-220ENST00000612045 TMA7Q9Y2S6 64 aaKnown RBP9.31□□□□□ -0.92
CBWD1-220ENST00000612045 FOLR2P14207 255 aa9.31□□□□□ -0.92
CBWD1-220ENST00000612045 FHL3Q13643 280 aa9.31□□□□□ -0.92
CBWD1-220ENST00000612045 IBA57Q5T440 356 aaKnown RBP9.31□□□□□ -0.92
CBWD1-220ENST00000612045 OR9G4Q8NGQ1 327 aa9.31□□□□□ -0.92
CBWD1-220ENST00000612045 DLX4Q92988 240 aaPredicted RBP9.31□□□□□ -0.92
CBWD1-220ENST00000612045 VGLL1Q99990 258 aa9.31□□□□□ -0.92
CBWD1-220ENST00000612045 ZFP30Q9Y2G7 519 aa9.31□□□□□ -0.92
CBWD1-220ENST00000612045 FBLL1A6NHQ2 334 aaKnown RBP9.3□□□□□ -0.92
CBWD1-220ENST00000612045 PFN1P07737 140 aaKnown RBP9.3□□□□□ -0.92
CBWD1-220ENST00000612045 PRR27Q6MZM9 219 aa9.3□□□□□ -0.92
CBWD1-220ENST00000612045 ADAMTSL5Q6ZMM2 481 aa9.3□□□□□ -0.92
CBWD1-220ENST00000612045 C20orf173Q96LM9 149 aa9.3□□□□□ -0.92
CBWD1-220ENST00000612045 ASCL2Q99929 193 aa9.3□□□□□ -0.92
CBWD1-220ENST00000612045 PEMTQ9UBM1 199 aa9.3□□□□□ -0.92
CBWD1-220ENST00000612045 MLXQ9UH92 298 aa9.3□□□□□ -0.92
CBWD1-220ENST00000612045 V9GYV3 84 aa9.3□□□□□ -0.92
CBWD1-220ENST00000612045 TGIF2-C20orf24A0A0A6YYL0 155 aa9.29□□□□□ -0.92
CBWD1-220ENST00000612045 M0QZ24 198 aa9.29□□□□□ -0.92
CBWD1-220ENST00000612045 CCL24O00175 119 aa9.29□□□□□ -0.92
CBWD1-220ENST00000612045 CXCL1P09341 107 aa9.29□□□□□ -0.92
CBWD1-220ENST00000612045 S100PP25815 95 aa9.29□□□□□ -0.92
CBWD1-220ENST00000612045 FAM231DQ6ZW35 169 aa9.29□□□□□ -0.92
CBWD1-220ENST00000612045 DCANP1Q8TF63 244 aa9.29□□□□□ -0.92
CBWD1-220ENST00000612045 IMMP2LQ96T52 175 aa9.29□□□□□ -0.92
CBWD1-220ENST00000612045 BIN3Q9NQY0 253 aa9.29□□□□□ -0.92
CBWD1-220ENST00000612045 RBAKDNA6NC62 111 aa9.28□□□□□ -0.92
CBWD1-220ENST00000612045 SAMD13Q5VXD3 122 aa9.28□□□□□ -0.92
CBWD1-220ENST00000612045 GBGT1Q8N5D6 347 aa9.28□□□□□ -0.92
CBWD1-220ENST00000612045 NUDT10Q8NFP7 164 aa9.28□□□□□ -0.92
CBWD1-220ENST00000612045 NUDT11Q96G61 164 aa9.28□□□□□ -0.92
CBWD1-220ENST00000612045 MS4A6AQ9H2W1 248 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms