RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 HIVEP3Q5T1R4 2406 aa13.43□□□□□ -0.26
NEK3-206ENST00000611833 IGHV3OR16-8A0A075B7F1 116 aa13.43□□□□□ -0.26
NEK3-206ENST00000611833 IGHV3-35A0A0C4DH35 117 aa13.43□□□□□ -0.26
NEK3-206ENST00000611833 SH2D1AO60880 128 aa13.43□□□□□ -0.26
NEK3-206ENST00000611833 DMRTA1Q5VZB9 504 aa13.43□□□□□ -0.26
NEK3-206ENST00000611833 CYB5R2Q6BCY4 276 aa13.43□□□□□ -0.26
NEK3-206ENST00000611833 STPG4Q8N801 248 aa13.43□□□□□ -0.26
NEK3-206ENST00000611833 UBTD1Q9HAC8 227 aa13.43□□□□□ -0.26
NEK3-206ENST00000611833 HSPB8Q9UJY1 196 aa13.43□□□□□ -0.26
NEK3-206ENST00000611833 LYZL1Q6UWQ5 148 aa13.42□□□□□ -0.26
NEK3-206ENST00000611833 PRSS3P2Q8NHM4 247 aa13.42□□□□□ -0.26
NEK3-206ENST00000611833 TMEM191AQ9H0A3 160 aa13.42□□□□□ -0.26
NEK3-206ENST00000611833 H0Y8G0 127 aa13.42□□□□□ -0.26
NEK3-206ENST00000611833 S100A7P31151 101 aa13.42□□□□□ -0.26
NEK3-206ENST00000611833 HINT1P49773 126 aaPredicted RBP13.42□□□□□ -0.26
NEK3-206ENST00000611833 ECSCRQ19T08 205 aa13.42□□□□□ -0.26
NEK3-206ENST00000611833 UNQ5815/PRO19632Q6UWF5 114 aa13.42□□□□□ -0.26
NEK3-206ENST00000611833 AP5S1Q9NUS5 200 aa13.42□□□□□ -0.26
NEK3-206ENST00000611833 GOLT1BQ9Y3E0 138 aa13.42□□□□□ -0.26
NEK3-206ENST00000611833 MED13LQ71F56 2210 aa13.42□□□□□ -0.26
NEK3-206ENST00000611833 IGFL4Q6B9Z1 124 aa13.41□□□□□ -0.26
NEK3-206ENST00000611833 FA2HQ7L5A8 372 aa13.41□□□□□ -0.26
NEK3-206ENST00000611833 PRR25Q96S07 402 aa13.41□□□□□ -0.26
NEK3-206ENST00000611833 SMAD5-AS1Q9Y6J3 95 aa13.41□□□□□ -0.26
NEK3-206ENST00000611833 IGHV2-70DA0A0C4DH43 119 aa13.41□□□□□ -0.26
NEK3-206ENST00000611833 GPR183P32249 361 aa13.41□□□□□ -0.26
NEK3-206ENST00000611833 UBE2E1P51965 193 aa13.41□□□□□ -0.26
NEK3-206ENST00000611833 GAGE1Q13065 139 aa13.41□□□□□ -0.26
NEK3-206ENST00000611833 AJUBAQ96IF1 538 aa13.41□□□□□ -0.26
NEK3-206ENST00000611833 C15orf32Q32M92 178 aa13.4□□□□□ -0.26
NEK3-206ENST00000611833 PET117Q6UWS5 81 aa13.4□□□□□ -0.26
NEK3-206ENST00000611833 ZNF493Q6ZR52 646 aa13.4□□□□□ -0.26
NEK3-206ENST00000611833 ARL6IP6Q8N6S5 226 aa13.4□□□□□ -0.26
NEK3-206ENST00000611833 ST20Q9HBF5 79 aa13.4□□□□□ -0.26
NEK3-206ENST00000611833 hDV102S1A0JD36 115 aa13.4□□□□□ -0.26
NEK3-206ENST00000611833 TMEM213A2RRL7 107 aa13.4□□□□□ -0.26
NEK3-206ENST00000611833 FBLL1A6NHQ2 334 aaKnown RBP13.4□□□□□ -0.26
NEK3-206ENST00000611833 HSBP1L1C9JCN9 74 aa13.4□□□□□ -0.26
NEK3-206ENST00000611833 EFNA4P52798 201 aa13.4□□□□□ -0.26
NEK3-206ENST00000611833 Q8TAT8 98 aa13.4□□□□□ -0.26
NEK3-206ENST00000611833 FAM110DQ8TAY7 271 aaPredicted RBP13.4□□□□□ -0.26
NEK3-206ENST00000611833 NPSP0C0P6 89 aa13.39□□□□□ -0.27
NEK3-206ENST00000611833 VGLL1Q99990 258 aa13.39□□□□□ -0.27
NEK3-206ENST00000611833 MUC21A0A0G2JKD1 596 aa13.39□□□□□ -0.27
NEK3-206ENST00000611833 MUC21A0A140T8X8 626 aa13.39□□□□□ -0.27
NEK3-206ENST00000611833 HLA-DMBP28068 263 aa13.39□□□□□ -0.27
NEK3-206ENST00000611833 SAA4P35542 130 aa13.39□□□□□ -0.27
NEK3-206ENST00000611833 RHOGP84095 191 aa13.39□□□□□ -0.27
NEK3-206ENST00000611833 MUC21Q5SSG8 566 aa13.39□□□□□ -0.27
NEK3-206ENST00000611833 MCRIP2Q9BUT9 160 aaKnown RBP13.39□□□□□ -0.27
NEK3-206ENST00000611833 D6R8Y8 96 aa13.38□□□□□ -0.27
NEK3-206ENST00000611833 ATP6V0E1O15342 81 aa13.38□□□□□ -0.27
NEK3-206ENST00000611833 CLEC3BP05452 202 aa13.38□□□□□ -0.27
NEK3-206ENST00000611833 BMI1P35226 326 aa13.38□□□□□ -0.27
NEK3-206ENST00000611833 COX8CQ7Z4L0 72 aa13.38□□□□□ -0.27
NEK3-206ENST00000611833 ZNF502Q8TBZ5 544 aa13.38□□□□□ -0.27
NEK3-206ENST00000611833 BPESC1Q9GZL8 116 aa13.38□□□□□ -0.27
NEK3-206ENST00000611833 CHD8Q9HCK8 2581 aa13.38□□□□□ -0.27
NEK3-206ENST00000611833 AMN1Q8IY45 258 aa13.38□□□□□ -0.27
NEK3-206ENST00000611833 NCOR2Q9Y618 2525 aa13.37□□□□□ -0.27
NEK3-206ENST00000611833 LOC389332A0A1B0GUA5 103 aa13.37□□□□□ -0.27
NEK3-206ENST00000611833 IFI27P40305 119 aaPredicted RBP13.37□□□□□ -0.27
NEK3-206ENST00000611833 UQCRFS1P47985 274 aa13.37□□□□□ -0.27
NEK3-206ENST00000611833 RPS20P60866 119 aaKnown RBP13.37□□□□□ -0.27
NEK3-206ENST00000611833 LMO4P61968 165 aa13.37□□□□□ -0.27
NEK3-206ENST00000611833 FAM104BQ5XKR9 115 aa13.37□□□□□ -0.27
NEK3-206ENST00000611833 OR10AG1Q8NH19 301 aa13.37□□□□□ -0.27
NEK3-206ENST00000611833 ITLN2Q8WWU7 325 aaPredicted RBP13.37□□□□□ -0.27
NEK3-206ENST00000611833 C19orf84I3L1E1 186 aa13.36□□□□□ -0.27
NEK3-206ENST00000611833 GOSR1O95249 250 aa13.36□□□□□ -0.27
NEK3-206ENST00000611833 IGHG4P01861 327 aa13.36□□□□□ -0.27
NEK3-206ENST00000611833 PRELID3AQ96N28 172 aa13.36□□□□□ -0.27
NEK3-206ENST00000611833 ITPR1Q14643 2758 aa13.36□□□□□ -0.27
NEK3-206ENST00000611833 ZNF80P51504 273 aaPredicted RBP13.36□□□□□ -0.27
NEK3-206ENST00000611833 ORMDL3Q8N138 153 aa13.36□□□□□ -0.27
NEK3-206ENST00000611833 FER1L6-AS1Q8NA97 138 aa13.36□□□□□ -0.27
NEK3-206ENST00000611833 TWIST1Q15672 202 aa13.35□□□□□ -0.27
NEK3-206ENST00000611833 PMCHL2Q9BQD1 86 aa13.35□□□□□ -0.27
NEK3-206ENST00000611833 RAB9AP51151 201 aa13.35□□□□□ -0.27
NEK3-206ENST00000611833 CLEC19AQ6UXS0 136 aa13.35□□□□□ -0.27
NEK3-206ENST00000611833 ZNF747Q9BV97 191 aa13.35□□□□□ -0.27
NEK3-206ENST00000611833 IGHV3-66A0A0C4DH42 116 aa13.34□□□□□ -0.27
NEK3-206ENST00000611833 G3V318 75 aa13.34□□□□□ -0.27
NEK3-206ENST00000611833 ORM1P02763 201 aa13.34□□□□□ -0.27
NEK3-206ENST00000611833 ZFAND3Q9H8U3 227 aa13.34□□□□□ -0.27
NEK3-206ENST00000611833 SIGLEC8Q9NYZ4 499 aa13.34□□□□□ -0.27
NEK3-206ENST00000611833 TP73-AS1Q9UF72 201 aa13.34□□□□□ -0.27
NEK3-206ENST00000611833 U3KQK5 164 aa13.34□□□□□ -0.27
NEK3-206ENST00000611833 BUB3O43684 328 aa13.34□□□□□ -0.27
NEK3-206ENST00000611833 ERCC8Q13216 396 aa13.34□□□□□ -0.27
NEK3-206ENST00000611833 FAM106AQ4KMX7 169 aa13.34□□□□□ -0.27
NEK3-206ENST00000611833 MRPL51Q4U2R6 128 aaKnown RBP13.34□□□□□ -0.27
NEK3-206ENST00000611833 LINC01545Q5VT33 79 aa13.34□□□□□ -0.27
NEK3-206ENST00000611833 SLC25A34Q6PIV7 304 aa13.34□□□□□ -0.27
NEK3-206ENST00000611833 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
NEK3-206ENST00000611833 PRORYQ9H606 182 aa13.34□□□□□ -0.27
NEK3-206ENST00000611833 LINC01548A6NM66 108 aa13.33□□□□□ -0.28
NEK3-206ENST00000611833 NPFFO15130 113 aa13.33□□□□□ -0.28
NEK3-206ENST00000611833 CKS2P33552 79 aa13.33□□□□□ -0.28
NEK3-206ENST00000611833 RNF182Q8N6D2 247 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms