RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 ZFAND3Q9H8U3 227 aa8.11□□□□□ -1.11
PABPC1-224ENST00000610907 MOB4Q9Y3A3 225 aa8.11□□□□□ -1.11
PABPC1-224ENST00000610907 HRNRQ86YZ3 2850 aaPredicted RBP8.11□□□□□ -1.11
PABPC1-224ENST00000610907 ZZEF1O43149 2961 aa8.11□□□□□ -1.11
PABPC1-224ENST00000610907 IGHV1-69DA0A0B4J2H0 117 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 C2orf70A6NJV1 201 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 CRXO43186 299 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-224ENST00000610907 BUB3O43684 328 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 BRI3O95415 125 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 IGHV1-69P01742 117 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 GPR183P32249 361 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 SNHG12Q9BXW3 62 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 CLEC5AQ9NY25 188 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 LRBAP50851 2863 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 A0A1B0GV90 55 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 FAM223BA6NKX1 122 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 SH2D1AO60880 128 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 ARMS2P0C7Q2 107 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 SPATA45Q537H7 98 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 LCN12Q6JVE5 192 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 EBLN2Q6P2I7 272 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 FAM223AQ8IWN6 122 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 MRPL53Q96EL3 112 aaKnown RBP8.1□□□□□ -1.11
PABPC1-224ENST00000610907 C8orf49Q96NF6 230 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 TMEM70Q9BUB7 260 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 UQCR10Q9UDW1 63 aa8.1□□□□□ -1.11
PABPC1-224ENST00000610907 WNK2Q9Y3S1 2297 aa8.09□□□□□ -1.11
PABPC1-224ENST00000610907 IGHG4P01861 327 aa8.09□□□□□ -1.11
PABPC1-224ENST00000610907 NUTF2P61970 127 aaKnown RBP8.09□□□□□ -1.11
PABPC1-224ENST00000610907 ATP5G2Q06055 141 aa8.09□□□□□ -1.11
PABPC1-224ENST00000610907 C19orf54Q5BKX5 351 aa8.09□□□□□ -1.11
PABPC1-224ENST00000610907 C10orf105Q8TEF2 133 aa8.09□□□□□ -1.11
PABPC1-224ENST00000610907 CCDC140Q96MF4 163 aa8.09□□□□□ -1.11
PABPC1-224ENST00000610907 HIF1ANQ9NWT6 349 aa8.09□□□□□ -1.11
PABPC1-224ENST00000610907 TRAV9-2A0A087WT02 112 aa8.08□□□□□ -1.12
PABPC1-224ENST00000610907 IGKV2-40A0A087WW87 121 aaPredicted RBP8.08□□□□□ -1.12
PABPC1-224ENST00000610907 TRAV41A0A0B4J266 112 aa8.08□□□□□ -1.12
PABPC1-224ENST00000610907 IGHV1-24A0A0C4DH33 117 aa8.08□□□□□ -1.12
PABPC1-224ENST00000610907 FABP5P3A8MUU1 101 aa8.08□□□□□ -1.12
PABPC1-224ENST00000610907 G3V318 75 aa8.08□□□□□ -1.12
PABPC1-224ENST00000610907 EREGO14944 169 aa8.08□□□□□ -1.12
PABPC1-224ENST00000610907 LEPROTL1O95214 131 aa8.08□□□□□ -1.12
PABPC1-224ENST00000610907 IGKV2D-40P01614 121 aaPredicted RBP8.08□□□□□ -1.12
PABPC1-224ENST00000610907 CLEC2AQ6UVW9 174 aa8.08□□□□□ -1.12
PABPC1-224ENST00000610907 CLEC19AQ6UXS0 136 aa8.08□□□□□ -1.12
PABPC1-224ENST00000610907 Q71RC1 249 aaPredicted RBP8.08□□□□□ -1.12
PABPC1-224ENST00000610907 METTL26Q96S19 204 aa8.08□□□□□ -1.12
PABPC1-224ENST00000610907 CCL19Q99731 98 aa8.08□□□□□ -1.12
PABPC1-224ENST00000610907 U3KQE9 123 aa8.08□□□□□ -1.12
PABPC1-224ENST00000610907 DCHS2Q6V1P9 2916 aa8.07□□□□□ -1.12
PABPC1-224ENST00000610907 CLPSL1A2RUU4 121 aa8.07□□□□□ -1.12
PABPC1-224ENST00000610907 H3BUA1 57 aa8.07□□□□□ -1.12
PABPC1-224ENST00000610907 IGF1P05019 195 aa8.07□□□□□ -1.12
PABPC1-224ENST00000610907 IGLC3P0DOY3 106 aa8.07□□□□□ -1.12
PABPC1-224ENST00000610907 LYZL1Q6UWQ5 148 aa8.07□□□□□ -1.12
PABPC1-224ENST00000610907 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.07□□□□□ -1.12
PABPC1-224ENST00000610907 PIFOQ8TCI5 191 aa8.07□□□□□ -1.12
PABPC1-224ENST00000610907 HSPB8Q9UJY1 196 aa8.07□□□□□ -1.12
PABPC1-224ENST00000610907 U3KQK5 164 aa8.07□□□□□ -1.12
PABPC1-224ENST00000610907 IGHV4-61A0A0C4DH41 118 aa8.06□□□□□ -1.12
PABPC1-224ENST00000610907 LINC01548A6NM66 108 aa8.06□□□□□ -1.12
PABPC1-224ENST00000610907 FAM104BQ5XKR9 115 aa8.06□□□□□ -1.12
PABPC1-224ENST00000610907 PET117Q6UWS5 81 aa8.06□□□□□ -1.12
PABPC1-224ENST00000610907 ASCL2Q99929 193 aa8.06□□□□□ -1.12
PABPC1-224ENST00000610907 VGLL1Q99990 258 aa8.06□□□□□ -1.12
PABPC1-224ENST00000610907 PPP1R14DQ9NXH3 145 aa8.06□□□□□ -1.12
PABPC1-224ENST00000610907 SYS1-DBNDD2H3BUS1 97 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 IGLC6P0CF74 106 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 DSCR9P59020 149 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 FER1L6-AS1Q8NA97 138 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 USMG5Q96IX5 58 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 SPOCK3Q9BQ16 436 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 TPPP3Q9BW30 176 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 MAP1LC3CQ9BXW4 147 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 CNFNQ9BYD5 112 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 AP5S1Q9NUS5 200 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 TACC2O95359 2948 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 ITPR1Q14643 2758 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 IGHV3-35A0A0C4DH35 117 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 HIST1H1AQ02539 215 aaPredicted RBP8.05□□□□□ -1.12
PABPC1-224ENST00000610907 LINC01559Q495D7 138 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 FA2HQ7L5A8 372 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 SPATA12Q7Z6I5 190 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 ORMDL3Q8N138 153 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 PRSS3P2Q8NHM4 247 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 TMEM191AQ9H0A3 160 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 MRPS16Q9Y3D3 137 aaKnown RBP8.05□□□□□ -1.12
PABPC1-224ENST00000610907 RELNP78509 3460 aa8.05□□□□□ -1.12
PABPC1-224ENST00000610907 TRAV40A0A0B4J280 105 aa8.04□□□□□ -1.12
PABPC1-224ENST00000610907 IGHG2P01859 326 aa8.04□□□□□ -1.12
PABPC1-224ENST00000610907 RPLP1P05386 114 aaKnown RBP8.04□□□□□ -1.12
PABPC1-224ENST00000610907 GATA3P23771 443 aa8.04□□□□□ -1.12
PABPC1-224ENST00000610907 HLA-DMBP28068 263 aa8.04□□□□□ -1.12
PABPC1-224ENST00000610907 ZNF80P51504 273 aaPredicted RBP8.04□□□□□ -1.12
PABPC1-224ENST00000610907 ATP5J2P56134 94 aa8.04□□□□□ -1.12
PABPC1-224ENST00000610907 TMEM219Q86XT9 240 aa8.04□□□□□ -1.12
PABPC1-224ENST00000610907 OR10AG1Q8NH19 301 aa8.04□□□□□ -1.12
PABPC1-224ENST00000610907 ST20Q9HBF5 79 aa8.04□□□□□ -1.12
PABPC1-224ENST00000610907 LENEPQ9Y5L5 61 aa8.04□□□□□ -1.12
PABPC1-224ENST00000610907 PKD1L2Q7Z442 2459 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms