RNA–Protein interactions for RNA: ENST00000608458.1

TAF4-206, Transcript of TATA-box binding protein associated factor 4, human

TSL 2

Gene TAF4, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF4-206	ENST00000608458	MINOS1-NBL1	R4GNA1	71 aa		13.71	□□□□□ -0.21
TAF4-206	ENST00000608458	ABCA4	P78363	2273 aa		13.71	□□□□□ -0.22
TAF4-206	ENST00000608458	SH2D7	A6NKC9	451 aa	Predicted RBP	13.7	□□□□□ -0.22
TAF4-206	ENST00000608458		M0R3E3	92 aa		13.7	□□□□□ -0.22
TAF4-206	ENST00000608458	SMIM17	P0DL12	118 aa		13.7	□□□□□ -0.22
TAF4-206	ENST00000608458	PRB4	P10163	310 aa	Predicted RBP	13.7	□□□□□ -0.22
TAF4-206	ENST00000608458	GTF2H5	Q6ZYL4	71 aa		13.7	□□□□□ -0.22
TAF4-206	ENST00000608458	AAMDC	Q9H7C9	122 aa		13.7	□□□□□ -0.22
TAF4-206	ENST00000608458		A0A1B0GUT8	65 aa		13.7	□□□□□ -0.22
TAF4-206	ENST00000608458	EBI3	Q14213	229 aa		13.7	□□□□□ -0.22
TAF4-206	ENST00000608458	FAM120AOS	Q5T036	256 aa		13.7	□□□□□ -0.22
TAF4-206	ENST00000608458		Q6ZVH6	145 aa		13.7	□□□□□ -0.22
TAF4-206	ENST00000608458	CLEC5A	Q9NY25	188 aa		13.7	□□□□□ -0.22
TAF4-206	ENST00000608458	C1RL	Q9NZP8	487 aa		13.7	□□□□□ -0.22
TAF4-206	ENST00000608458	SPTA1	P02549	2419 aa		13.7	□□□□□ -0.22
TAF4-206	ENST00000608458	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.69	□□□□□ -0.22
TAF4-206	ENST00000608458	ZFP36	P26651	326 aa	Known RBP	13.69	□□□□□ -0.22
TAF4-206	ENST00000608458	IGHV1-24	A0A0C4DH33	117 aa		13.69	□□□□□ -0.22
TAF4-206	ENST00000608458	CRIP1	P50238	77 aa		13.69	□□□□□ -0.22
TAF4-206	ENST00000608458	AMMECR1L	Q6DCA0	310 aa		13.69	□□□□□ -0.22
TAF4-206	ENST00000608458	TMEM70	Q9BUB7	260 aa		13.69	□□□□□ -0.22
TAF4-206	ENST00000608458	IGHV3-23	P01764	117 aa		13.68	□□□□□ -0.22
TAF4-206	ENST00000608458	ARMS2	P0C7Q2	107 aa		13.68	□□□□□ -0.22
TAF4-206	ENST00000608458	RIG	Q13278	110 aa		13.68	□□□□□ -0.22
TAF4-206	ENST00000608458	SAMD13	Q5VXD3	122 aa		13.68	□□□□□ -0.22
TAF4-206	ENST00000608458	FER1L6-AS1	Q8NA97	138 aa		13.68	□□□□□ -0.22
TAF4-206	ENST00000608458	CSN1S1	P47710	185 aa		13.67	□□□□□ -0.22
TAF4-206	ENST00000608458	BVES-AS1	Q5T3Y7	98 aa		13.67	□□□□□ -0.22
TAF4-206	ENST00000608458	CFAP161	Q6P656	301 aa		13.67	□□□□□ -0.22
TAF4-206	ENST00000608458	OR2T8	A6NH00	312 aa		13.67	□□□□□ -0.22
TAF4-206	ENST00000608458	SCGB2A1	O75556	95 aa		13.67	□□□□□ -0.22
TAF4-206	ENST00000608458	CT45A10	P0DMU9	189 aa		13.67	□□□□□ -0.22
TAF4-206	ENST00000608458	PSG9	Q00887	426 aa		13.67	□□□□□ -0.22
TAF4-206	ENST00000608458	SIRPD	Q9H106	197 aa		13.67	□□□□□ -0.22
TAF4-206	ENST00000608458		A0A1B0GW15	77 aa		13.66	□□□□□ -0.22
TAF4-206	ENST00000608458	SERTM2	A0A1B0GWG4	89 aa		13.66	□□□□□ -0.22
TAF4-206	ENST00000608458	RPL7	P18124	248 aa	Known RBP	13.66	□□□□□ -0.22
TAF4-206	ENST00000608458		Q6AWC8	147 aa		13.66	□□□□□ -0.22
TAF4-206	ENST00000608458	SPATA12	Q7Z6I5	190 aa		13.66	□□□□□ -0.22
TAF4-206	ENST00000608458	GATD1	Q8NB37	220 aa		13.66	□□□□□ -0.22
TAF4-206	ENST00000608458	C8orf49	Q96NF6	230 aa		13.66	□□□□□ -0.22
TAF4-206	ENST00000608458	IGF2R	P11717	2491 aa		13.66	□□□□□ -0.22
TAF4-206	ENST00000608458	IGHV7-81	A0A0B4J1V7	117 aa		13.66	□□□□□ -0.22
TAF4-206	ENST00000608458		A0A1W2PPR1	153 aa		13.66	□□□□□ -0.22
TAF4-206	ENST00000608458	CRX	O43186	299 aa	Predicted RBP	13.66	□□□□□ -0.22
TAF4-206	ENST00000608458	LEPROTL1	O95214	131 aa		13.66	□□□□□ -0.22
TAF4-206	ENST00000608458	EGR2	P11161	476 aa	Predicted RBP	13.66	□□□□□ -0.22
TAF4-206	ENST00000608458	NDUFS7	O75251	213 aa		13.65	□□□□□ -0.22
TAF4-206	ENST00000608458	CTSG	P08311	255 aa		13.65	□□□□□ -0.22
TAF4-206	ENST00000608458	IGLL1	P15814	213 aa		13.65	□□□□□ -0.22
TAF4-206	ENST00000608458	FAM106CP	P0CH98	169 aa		13.64	□□□□□ -0.23
TAF4-206	ENST00000608458		Q8N9W7	124 aa		13.64	□□□□□ -0.23
TAF4-206	ENST00000608458	TPPP3	Q9BW30	176 aa		13.64	□□□□□ -0.23
TAF4-206	ENST00000608458	RABAC1	Q9UI14	185 aa		13.64	□□□□□ -0.23
TAF4-206	ENST00000608458	SEC11A	P67812	179 aa		13.64	□□□□□ -0.23
TAF4-206	ENST00000608458	SCGB2A2	Q13296	93 aa		13.64	□□□□□ -0.23
TAF4-206	ENST00000608458	MPV17L2	Q567V2	206 aa		13.64	□□□□□ -0.23
TAF4-206	ENST00000608458	GAGE10	A6NGK3	116 aa		13.63	□□□□□ -0.23
TAF4-206	ENST00000608458	SYS1-DBNDD2	H3BUS1	97 aa		13.63	□□□□□ -0.23
TAF4-206	ENST00000608458	OR5AL1	P0C617	328 aa		13.63	□□□□□ -0.23
TAF4-206	ENST00000608458	ZNF138	P52744	262 aa		13.63	□□□□□ -0.23
TAF4-206	ENST00000608458	RIPPLY3	P57055	190 aa		13.63	□□□□□ -0.23
TAF4-206	ENST00000608458	SLC25A34	Q6PIV7	304 aa		13.63	□□□□□ -0.23
TAF4-206	ENST00000608458	LINC00173	Q6ZV60	143 aa		13.63	□□□□□ -0.23
TAF4-206	ENST00000608458	PMCHL2	Q9BQD1	86 aa		13.63	□□□□□ -0.23
TAF4-206	ENST00000608458	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.63	□□□□□ -0.23
TAF4-206	ENST00000608458	NUDT3	O95989	172 aa		13.63	□□□□□ -0.23
TAF4-206	ENST00000608458	IGKV2D-40	P01614	121 aa	Predicted RBP	13.63	□□□□□ -0.23
TAF4-206	ENST00000608458	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.63	□□□□□ -0.23
TAF4-206	ENST00000608458	OR4C46	A6NHA9	309 aa		13.62	□□□□□ -0.23
TAF4-206	ENST00000608458	UFSP1	Q6NVU6	142 aa		13.62	□□□□□ -0.23
TAF4-206	ENST00000608458	CLUHP3	Q96NS8	147 aa		13.62	□□□□□ -0.23
TAF4-206	ENST00000608458	UBTD1	Q9HAC8	227 aa		13.62	□□□□□ -0.23
TAF4-206	ENST00000608458	TMEM189	A5PLL7	270 aa		13.61	□□□□□ -0.23
TAF4-206	ENST00000608458	SH2D1A	O60880	128 aa		13.61	□□□□□ -0.23
TAF4-206	ENST00000608458	CSN3	P07498	182 aa		13.61	□□□□□ -0.23
TAF4-206	ENST00000608458	UBE2E1	P51965	193 aa		13.61	□□□□□ -0.23
TAF4-206	ENST00000608458	HIST1H1A	Q02539	215 aa	Predicted RBP	13.61	□□□□□ -0.23
TAF4-206	ENST00000608458	NEGR1	Q7Z3B1	354 aa		13.61	□□□□□ -0.23
TAF4-206	ENST00000608458	TMUB1	Q9BVT8	246 aa		13.61	□□□□□ -0.23
TAF4-206	ENST00000608458	TMEM95	Q3KNT9	176 aa		13.61	□□□□□ -0.23
TAF4-206	ENST00000608458	COX8C	Q7Z4L0	72 aa		13.61	□□□□□ -0.23
TAF4-206	ENST00000608458	MTURN	Q8N3F0	131 aa		13.61	□□□□□ -0.23
TAF4-206	ENST00000608458	MS4A6A	Q9H2W1	248 aa		13.61	□□□□□ -0.23
TAF4-206	ENST00000608458	SMAD5-AS1	Q9Y6J3	95 aa		13.61	□□□□□ -0.23
TAF4-206	ENST00000608458	FBLL1	A6NHQ2	334 aa	Known RBP	13.6	□□□□□ -0.23
TAF4-206	ENST00000608458	ZNF493	Q6ZR52	646 aa		13.6	□□□□□ -0.23
TAF4-206	ENST00000608458	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.6	□□□□□ -0.23
TAF4-206	ENST00000608458	PRR25	Q96S07	402 aa		13.6	□□□□□ -0.23
TAF4-206	ENST00000608458	TMSB15B	A0A087X1C1	80 aa		13.6	□□□□□ -0.23
TAF4-206	ENST00000608458	EFNA4	P52798	201 aa		13.6	□□□□□ -0.23
TAF4-206	ENST00000608458	LYZL1	Q6UWQ5	148 aa		13.6	□□□□□ -0.23
TAF4-206	ENST00000608458	OR5A1	Q8NGJ0	315 aa		13.6	□□□□□ -0.23
TAF4-206	ENST00000608458	AJUBA	Q96IF1	538 aa		13.6	□□□□□ -0.23
TAF4-206	ENST00000608458	MAP1LC3C	Q9BXW4	147 aa		13.6	□□□□□ -0.23
TAF4-206	ENST00000608458	ATRX	P46100	2492 aa		13.59	□□□□□ -0.23
TAF4-206	ENST00000608458	ECSCR	Q19T08	205 aa		13.59	□□□□□ -0.23
TAF4-206	ENST00000608458	C15orf32	Q32M92	178 aa		13.59	□□□□□ -0.23
TAF4-206	ENST00000608458	AP5S1	Q9NUS5	200 aa		13.59	□□□□□ -0.23
TAF4-206	ENST00000608458	HSPB8	Q9UJY1	196 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 65 ms