RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 H3BQ15 152 aa13.72□□□□□ -0.21
CTSA-217ENST00000607482 SLC17A3O00476 420 aa13.72□□□□□ -0.21
CTSA-217ENST00000607482 IGLC2P0DOY2 106 aa13.72□□□□□ -0.21
CTSA-217ENST00000607482 MARVELD1Q9BSK0 173 aa13.72□□□□□ -0.21
CTSA-217ENST00000607482 OR5AC2Q9NZP5 309 aa13.72□□□□□ -0.21
CTSA-217ENST00000607482 C17orf112F2Z3M2 114 aa13.71□□□□□ -0.21
CTSA-217ENST00000607482 CRXO43186 299 aaPredicted RBP13.71□□□□□ -0.21
CTSA-217ENST00000607482 DEFB130BP0DP73 79 aa13.71□□□□□ -0.21
CTSA-217ENST00000607482 DEFB130AP0DP74 79 aa13.71□□□□□ -0.21
CTSA-217ENST00000607482 UBE2DNLQ8IWF7 75 aa13.71□□□□□ -0.21
CTSA-217ENST00000607482 CHAC2Q8WUX2 184 aa13.71□□□□□ -0.21
CTSA-217ENST00000607482 BLNKQ8WV28 456 aa13.71□□□□□ -0.21
CTSA-217ENST00000607482 FAM210BQ96KR6 192 aa13.71□□□□□ -0.21
CTSA-217ENST00000607482 PRM2P04554 102 aa13.7□□□□□ -0.22
CTSA-217ENST00000607482 TAS2R60P59551 318 aa13.7□□□□□ -0.22
CTSA-217ENST00000607482 OXA1LQ15070 435 aa13.7□□□□□ -0.22
CTSA-217ENST00000607482 CCDC28AQ8IWP9 274 aa13.7□□□□□ -0.22
CTSA-217ENST00000607482 PPP1R1CQ8WVI7 109 aa13.7□□□□□ -0.22
CTSA-217ENST00000607482 AAMDCQ9H7C9 122 aa13.7□□□□□ -0.22
CTSA-217ENST00000607482 LYRM9A8MSI8 78 aa13.69□□□□□ -0.22
CTSA-217ENST00000607482 J3KRW8 73 aa13.69□□□□□ -0.22
CTSA-217ENST00000607482 LEPP41159 167 aa13.69□□□□□ -0.22
CTSA-217ENST00000607482 SCGB1C1Q8TD33 95 aa13.69□□□□□ -0.22
CTSA-217ENST00000607482 C16orf74Q96GX8 76 aa13.69□□□□□ -0.22
CTSA-217ENST00000607482 ZNF586Q9NXT0 402 aa13.69□□□□□ -0.22
CTSA-217ENST00000607482 PRAC2D3DTV9 90 aa13.68□□□□□ -0.22
CTSA-217ENST00000607482 H7BYZ3 331 aa13.68□□□□□ -0.22
CTSA-217ENST00000607482 HIST1H1EP10412 219 aaKnown RBP13.68□□□□□ -0.22
CTSA-217ENST00000607482 H2BFSP57053 126 aa13.68□□□□□ -0.22
CTSA-217ENST00000607482 SAT2Q96F10 170 aaPredicted RBP13.68□□□□□ -0.22
CTSA-217ENST00000607482 TMEM14CQ9P0S9 112 aa13.68□□□□□ -0.22
CTSA-217ENST00000607482 TRBV19A0A075B6N1 114 aa13.67□□□□□ -0.22
CTSA-217ENST00000607482 ZNF253O75346 499 aa13.67□□□□□ -0.22
CTSA-217ENST00000607482 IFNA5P01569 189 aa13.67□□□□□ -0.22
CTSA-217ENST00000607482 GCSAMLQ5JQS6 135 aa13.67□□□□□ -0.22
CTSA-217ENST00000607482 PRELID1Q9Y255 219 aa13.67□□□□□ -0.22
CTSA-217ENST00000607482 EPPK1P58107 5090 aaKnown RBP13.66□□□□□ -0.22
CTSA-217ENST00000607482 PYYP10082 97 aa13.66□□□□□ -0.22
CTSA-217ENST00000607482 AZU1P20160 251 aa13.66□□□□□ -0.22
CTSA-217ENST00000607482 ZNF493Q6ZR52 646 aa13.66□□□□□ -0.22
CTSA-217ENST00000607482 POM121L12Q8N7R1 296 aa13.66□□□□□ -0.22
CTSA-217ENST00000607482 ATP5SQ99766 215 aa13.66□□□□□ -0.22
CTSA-217ENST00000607482 C20orf144Q9BQM9 153 aa13.66□□□□□ -0.22
CTSA-217ENST00000607482 PARD6GQ9BYG4 376 aaPredicted RBP13.66□□□□□ -0.22
CTSA-217ENST00000607482 WDR61Q9GZS3 305 aaKnown RBP13.66□□□□□ -0.22
CTSA-217ENST00000607482 TIMM8BQ9Y5J9 83 aaPredicted RBP13.66□□□□□ -0.22
CTSA-217ENST00000607482 H0YIZ8 118 aa13.65□□□□□ -0.22
CTSA-217ENST00000607482 MPC2O95563 127 aa13.65□□□□□ -0.22
CTSA-217ENST00000607482 PDE6HQ13956 83 aa13.65□□□□□ -0.22
CTSA-217ENST00000607482 MRPL53Q96EL3 112 aaKnown RBP13.65□□□□□ -0.22
CTSA-217ENST00000607482 SMIM3Q9BZL3 60 aa13.65□□□□□ -0.22
CTSA-217ENST00000607482 TRAV12-3A0A0B4J271 114 aa13.64□□□□□ -0.23
CTSA-217ENST00000607482 F5H768 121 aa13.64□□□□□ -0.23
CTSA-217ENST00000607482 RPL12P30050 165 aaKnown RBP13.64□□□□□ -0.23
CTSA-217ENST00000607482 FCN2Q15485 313 aa13.64□□□□□ -0.23
CTSA-217ENST00000607482 GFI1BQ5VTD9 330 aa13.64□□□□□ -0.23
CTSA-217ENST00000607482 TMEM88Q6PEY1 159 aa13.64□□□□□ -0.23
CTSA-217ENST00000607482 MIR17HGQ75NE6 70 aa13.64□□□□□ -0.23
CTSA-217ENST00000607482 TMEM263Q8WUH6 116 aaKnown RBP13.64□□□□□ -0.23
CTSA-217ENST00000607482 MRPL32Q9BYC8 188 aaKnown RBP13.64□□□□□ -0.23
CTSA-217ENST00000607482 OR51M1Q9H341 326 aa13.64□□□□□ -0.23
CTSA-217ENST00000607482 NPIPB6E9PJ23 425 aa13.63□□□□□ -0.23
CTSA-217ENST00000607482 OR7C2O60412 319 aa13.63□□□□□ -0.23
CTSA-217ENST00000607482 CT45A10P0DMU9 189 aa13.63□□□□□ -0.23
CTSA-217ENST00000607482 ICAM4Q14773 271 aa13.63□□□□□ -0.23
CTSA-217ENST00000607482 EXOC3-AS1Q8N2X6 119 aa13.63□□□□□ -0.23
CTSA-217ENST00000607482 PAXXQ9BUH6 204 aa13.63□□□□□ -0.23
CTSA-217ENST00000607482 SLC25A2Q9BXI2 301 aa13.63□□□□□ -0.23
CTSA-217ENST00000607482 NOP10Q9NPE3 64 aaKnown RBP13.63□□□□□ -0.23
CTSA-217ENST00000607482 HSPB11Q9Y547 144 aa13.63□□□□□ -0.23
CTSA-217ENST00000607482 SNURFLB1AK76 121 aa13.62□□□□□ -0.23
CTSA-217ENST00000607482 M0R3E3 92 aa13.62□□□□□ -0.23
CTSA-217ENST00000607482 ATP5G1P05496 136 aa13.62□□□□□ -0.23
CTSA-217ENST00000607482 NBEAP1P0C6P0 100 aa13.62□□□□□ -0.23
CTSA-217ENST00000607482 ATP5G3P48201 142 aa13.62□□□□□ -0.23
CTSA-217ENST00000607482 FFAR4Q5NUL3 377 aa13.62□□□□□ -0.23
CTSA-217ENST00000607482 TMEM78Q5T7P6 136 aa13.62□□□□□ -0.23
CTSA-217ENST00000607482 FAM122CQ6P4D5 195 aa13.62□□□□□ -0.23
CTSA-217ENST00000607482 ODF3Q96PU9 254 aa13.62□□□□□ -0.23
CTSA-217ENST00000607482 ATG101Q9BSB4 218 aa13.62□□□□□ -0.23
CTSA-217ENST00000607482 MBD2Q9UBB5 411 aa13.62□□□□□ -0.23
CTSA-217ENST00000607482 FUT9Q9Y231 359 aa13.62□□□□□ -0.23
CTSA-217ENST00000607482 CBY3A6NI87 242 aa13.61□□□□□ -0.23
CTSA-217ENST00000607482 OR10J4P0C629 311 aa13.61□□□□□ -0.23
CTSA-217ENST00000607482 CSN1S1P47710 185 aa13.61□□□□□ -0.23
CTSA-217ENST00000607482 ERCC8Q13216 396 aa13.61□□□□□ -0.23
CTSA-217ENST00000607482 KIR3DS1Q14943 382 aa13.61□□□□□ -0.23
CTSA-217ENST00000607482 C15orf53Q8NAA6 179 aa13.61□□□□□ -0.23
CTSA-217ENST00000607482 LINC00477Q96M19 166 aa13.61□□□□□ -0.23
CTSA-217ENST00000607482 KMT2AQ03164 3969 aa13.61□□□□□ -0.23
CTSA-217ENST00000607482 M0R2N4 97 aa13.6□□□□□ -0.23
CTSA-217ENST00000607482 NDUFB4O95168 129 aa13.6□□□□□ -0.23
CTSA-217ENST00000607482 SLC25A5P05141 298 aaKnown RBP13.6□□□□□ -0.23
CTSA-217ENST00000607482 GPX1P07203 203 aa13.6□□□□□ -0.23
CTSA-217ENST00000607482 TAS2R45P59539 299 aa13.6□□□□□ -0.23
CTSA-217ENST00000607482 RNF141Q8WVD5 230 aa13.6□□□□□ -0.23
CTSA-217ENST00000607482 ALG5Q9Y673 324 aa13.6□□□□□ -0.23
CTSA-217ENST00000607482 NUDT3O95989 172 aa13.59□□□□□ -0.23
CTSA-217ENST00000607482 RNASE4P34096 147 aaKnown RBP13.59□□□□□ -0.23
CTSA-217ENST00000607482 RNASE8Q8TDE3 154 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms