RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 WFDC1Q9HC57 220 aa10.36□□□□□ -0.75
TUBE1-208ENST00000604743 TRBV19A0A075B6N1 114 aa10.35□□□□□ -0.75
TUBE1-208ENST00000604743 CRXO43186 299 aaPredicted RBP10.35□□□□□ -0.75
TUBE1-208ENST00000604743 PRM2P04554 102 aa10.35□□□□□ -0.75
TUBE1-208ENST00000604743 OXA1LQ15070 435 aa10.35□□□□□ -0.75
TUBE1-208ENST00000604743 RRN3P1Q2M238 152 aa10.35□□□□□ -0.75
TUBE1-208ENST00000604743 C2CD4CQ8TF44 421 aa10.35□□□□□ -0.75
TUBE1-208ENST00000604743 LINC00476Q8WZB0 136 aa10.35□□□□□ -0.75
TUBE1-208ENST00000604743 PARD6GQ9BYG4 376 aaPredicted RBP10.35□□□□□ -0.75
TUBE1-208ENST00000604743 TMEM14CQ9P0S9 112 aa10.35□□□□□ -0.75
TUBE1-208ENST00000604743 LOC102723971A0A1B0GUV8 181 aa10.34□□□□□ -0.75
TUBE1-208ENST00000604743 TMEM189A5PLL7 270 aa10.34□□□□□ -0.75
TUBE1-208ENST00000604743 ZNF705GA8MUZ8 300 aaPredicted RBP10.34□□□□□ -0.75
TUBE1-208ENST00000604743 IGLL5B9A064 214 aa10.34□□□□□ -0.75
TUBE1-208ENST00000604743 C11orf94C9JXX5 98 aa10.34□□□□□ -0.75
TUBE1-208ENST00000604743 SPART-AS1P0CW21 52 aa10.34□□□□□ -0.75
TUBE1-208ENST00000604743 C12orf74Q32Q52 190 aa10.34□□□□□ -0.75
TUBE1-208ENST00000604743 FAM167A-AS1Q96KT0 104 aa10.34□□□□□ -0.75
TUBE1-208ENST00000604743 LINC01587Q99440 93 aa10.34□□□□□ -0.75
TUBE1-208ENST00000604743 MRPL32Q9BYC8 188 aaKnown RBP10.34□□□□□ -0.75
TUBE1-208ENST00000604743 FUT9Q9Y231 359 aa10.34□□□□□ -0.75
TUBE1-208ENST00000604743 TRAV10A0A0B4J240 114 aa10.33□□□□□ -0.76
TUBE1-208ENST00000604743 J3KRW8 73 aa10.33□□□□□ -0.76
TUBE1-208ENST00000604743 M0R3E3 92 aa10.33□□□□□ -0.76
TUBE1-208ENST00000604743 ZNF253O75346 499 aa10.33□□□□□ -0.76
TUBE1-208ENST00000604743 NDUFB4O95168 129 aa10.33□□□□□ -0.76
TUBE1-208ENST00000604743 OR10J4P0C629 311 aa10.33□□□□□ -0.76
TUBE1-208ENST00000604743 HTN1P15515 57 aa10.33□□□□□ -0.76
TUBE1-208ENST00000604743 Q5BKY6 102 aa10.33□□□□□ -0.76
TUBE1-208ENST00000604743 FAM222AQ5U5X8 452 aa10.33□□□□□ -0.76
TUBE1-208ENST00000604743 EXOC3-AS1Q8N2X6 119 aa10.33□□□□□ -0.76
TUBE1-208ENST00000604743 RPP25LQ8N5L8 163 aaKnown RBP10.33□□□□□ -0.76
TUBE1-208ENST00000604743 PAXXQ9BUH6 204 aa10.33□□□□□ -0.76
TUBE1-208ENST00000604743 OR51M1Q9H341 326 aa10.33□□□□□ -0.76
TUBE1-208ENST00000604743 PLA2G2EQ9NZK7 142 aa10.33□□□□□ -0.76
TUBE1-208ENST00000604743 OR7C2O60412 319 aa10.32□□□□□ -0.76
TUBE1-208ENST00000604743 EIF3GO75821 320 aaKnown RBP eCLIP10.32□□□□□ -0.76
TUBE1-208ENST00000604743 NBEAP1P0C6P0 100 aa10.32□□□□□ -0.76
TUBE1-208ENST00000604743 CDKN1BP46527 198 aa10.32□□□□□ -0.76
TUBE1-208ENST00000604743 ICAM4Q14773 271 aa10.32□□□□□ -0.76
TUBE1-208ENST00000604743 KIR3DS1Q14943 382 aa10.32□□□□□ -0.76
TUBE1-208ENST00000604743 AAMDCQ9H7C9 122 aa10.32□□□□□ -0.76
TUBE1-208ENST00000604743 YTHDF2Q9Y5A9 579 aaKnown RBP10.32□□□□□ -0.76
TUBE1-208ENST00000604743 DEFB131BA0A096LNP1 70 aa10.31□□□□□ -0.76
TUBE1-208ENST00000604743 GIPP09681 153 aaPredicted RBP10.31□□□□□ -0.76
TUBE1-208ENST00000604743 CT45A10P0DMU9 189 aa10.31□□□□□ -0.76
TUBE1-208ENST00000604743 ERCC8Q13216 396 aa10.31□□□□□ -0.76
TUBE1-208ENST00000604743 PDE6HQ13956 83 aa10.31□□□□□ -0.76
TUBE1-208ENST00000604743 FAM122CQ6P4D5 195 aa10.31□□□□□ -0.76
TUBE1-208ENST00000604743 RNF141Q8WVD5 230 aa10.31□□□□□ -0.76
TUBE1-208ENST00000604743 FXYD5Q96DB9 178 aa10.31□□□□□ -0.76
TUBE1-208ENST00000604743 DKK2Q9UBU2 259 aa10.31□□□□□ -0.76
TUBE1-208ENST00000604743 FXYD6-FXYD2A0A087WZ82 144 aa10.3□□□□□ -0.76
TUBE1-208ENST00000604743 AZU1P20160 251 aa10.3□□□□□ -0.76
TUBE1-208ENST00000604743 TSPOP30536 169 aa10.3□□□□□ -0.76
TUBE1-208ENST00000604743 ACOT6Q3I5F7 207 aaPredicted RBP10.3□□□□□ -0.76
TUBE1-208ENST00000604743 HSD17B11Q8NBQ5 300 aa10.3□□□□□ -0.76
TUBE1-208ENST00000604743 MRPL53Q96EL3 112 aaKnown RBP10.3□□□□□ -0.76
TUBE1-208ENST00000604743 NIPSNAP3BQ9BS92 247 aa10.3□□□□□ -0.76
TUBE1-208ENST00000604743 PRELID1Q9Y255 219 aa10.3□□□□□ -0.76
TUBE1-208ENST00000604743 NPIPB6E9PJ23 425 aa10.29□□□□□ -0.76
TUBE1-208ENST00000604743 HTN3P15516 51 aa10.29□□□□□ -0.76
TUBE1-208ENST00000604743 TAS2R45P59539 299 aa10.29□□□□□ -0.76
TUBE1-208ENST00000604743 RAB2AP61019 212 aa10.29□□□□□ -0.76
TUBE1-208ENST00000604743 UBE2L3P68036 154 aaKnown RBP10.29□□□□□ -0.76
TUBE1-208ENST00000604743 KHDC3LQ587J8 217 aa10.29□□□□□ -0.76
TUBE1-208ENST00000604743 GFI1BQ5VTD9 330 aa10.29□□□□□ -0.76
TUBE1-208ENST00000604743 TMEM256Q8N2U0 113 aa10.29□□□□□ -0.76
TUBE1-208ENST00000604743 ZNF503Q96F45 646 aa10.29□□□□□ -0.76
TUBE1-208ENST00000604743 PHYHIPLQ96FC7 376 aa10.29□□□□□ -0.76
TUBE1-208ENST00000604743 AQP10Q96PS8 301 aa10.29□□□□□ -0.76
TUBE1-208ENST00000604743 APLNQ9ULZ1 77 aa10.29□□□□□ -0.76
TUBE1-208ENST00000604743 IGHV4-4A0A075B6R2 117 aa10.28□□□□□ -0.76
TUBE1-208ENST00000604743 IGKV2-40A0A087WW87 121 aaPredicted RBP10.28□□□□□ -0.76
TUBE1-208ENST00000604743 TEX48A0A1B0GUV7 120 aa10.28□□□□□ -0.76
TUBE1-208ENST00000604743 A0A1W2PPV4 95 aa10.28□□□□□ -0.76
TUBE1-208ENST00000604743 IGKV2D-40P01614 121 aaPredicted RBP10.28□□□□□ -0.76
TUBE1-208ENST00000604743 M6PRP20645 277 aa10.28□□□□□ -0.76
TUBE1-208ENST00000604743 LEPP41159 167 aa10.28□□□□□ -0.76
TUBE1-208ENST00000604743 TAS2R60P59551 318 aa10.28□□□□□ -0.76
TUBE1-208ENST00000604743 DAD1P61803 113 aa10.28□□□□□ -0.76
TUBE1-208ENST00000604743 RANP62826 216 aaKnown RBP10.28□□□□□ -0.76
TUBE1-208ENST00000604743 ZNF266Q14584 549 aa10.28□□□□□ -0.76
TUBE1-208ENST00000604743 INO80EQ8NBZ0 244 aaPredicted RBP10.28□□□□□ -0.76
TUBE1-208ENST00000604743 OR2T35Q8NGX2 323 aa10.28□□□□□ -0.76
TUBE1-208ENST00000604743 ASB13Q8WXK3 278 aa10.28□□□□□ -0.76
TUBE1-208ENST00000604743 TRAV12-3A0A0B4J271 114 aa10.27□□□□□ -0.77
TUBE1-208ENST00000604743 HMGB3O15347 200 aaKnown RBP10.27□□□□□ -0.77
TUBE1-208ENST00000604743 OR10G4Q8NGN3 311 aa10.27□□□□□ -0.77
TUBE1-208ENST00000604743 OR10G9Q8NGN4 311 aa10.27□□□□□ -0.77
TUBE1-208ENST00000604743 OR10G7Q8NGN6 311 aa10.27□□□□□ -0.77
TUBE1-208ENST00000604743 AGPAT4-IT1Q9H0P7 198 aa10.27□□□□□ -0.77
TUBE1-208ENST00000604743 H7BYZ3 331 aa10.26□□□□□ -0.77
TUBE1-208ENST00000604743 ATP6V0CP27449 155 aa10.26□□□□□ -0.77
TUBE1-208ENST00000604743 TCTAP57738 103 aa10.26□□□□□ -0.77
TUBE1-208ENST00000604743 LGALS9CQ6DKI2 356 aa10.26□□□□□ -0.77
TUBE1-208ENST00000604743 LINC00477Q96M19 166 aa10.26□□□□□ -0.77
TUBE1-208ENST00000604743 ODF3Q96PU9 254 aa10.26□□□□□ -0.77
TUBE1-208ENST00000604743 VGLL1Q99990 258 aa10.26□□□□□ -0.77
TUBE1-208ENST00000604743 Q9H3A6 140 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms