RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 ATP5L2Q7Z4Y8 100 aa12.31□□□□□ -0.44
PPFIA3-206ENST00000602655 ZNF146Q15072 292 aa12.31□□□□□ -0.44
PPFIA3-206ENST00000602655 TMSB15BA0A087X1C1 80 aa12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 TRBV6-6A0A0A6YYG2 114 aa12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 TRBV7-9A0A0J9YWB2 115 aa12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 COX7A1P24310 79 aa12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 MBNL2Q5VZF2 373 aaKnown RBP12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 SLC25A10Q9UBX3 287 aaPredicted RBP12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 VPS13CQ709C8 3753 aa12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 NOTCH3Q9UM47 2321 aa12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 ZNF503Q96F45 646 aa12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 MGST3O14880 152 aa12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 PRSS1P07477 247 aa12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 FAM106CPP0CH98 169 aa12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 FGF6P10767 208 aa12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 IFI27P40305 119 aaPredicted RBP12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 FAM106AQ4KMX7 169 aa12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 GLMPQ8WWB7 406 aa12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 RNASE6Q93091 150 aaKnown RBP12.3□□□□□ -0.44
PPFIA3-206ENST00000602655 SRRM5B3KS81 715 aa12.29□□□□□ -0.44
PPFIA3-206ENST00000602655 LINC00596Q86U02 117 aa12.29□□□□□ -0.44
PPFIA3-206ENST00000602655 CUBNO60494 3623 aa12.29□□□□□ -0.44
PPFIA3-206ENST00000602655 NPIPB11E5RHQ5 1161 aa12.29□□□□□ -0.44
PPFIA3-206ENST00000602655 LTAP01374 205 aa12.29□□□□□ -0.44
PPFIA3-206ENST00000602655 P0C879 139 aa12.29□□□□□ -0.44
PPFIA3-206ENST00000602655 TNFRSF1AP19438 455 aa12.29□□□□□ -0.44
PPFIA3-206ENST00000602655 MORN5Q5VZ52 161 aa12.29□□□□□ -0.44
PPFIA3-206ENST00000602655 RBPMS2Q6ZRY4 209 aaKnown RBP12.29□□□□□ -0.44
PPFIA3-206ENST00000602655 PPP1R35Q8TAP8 253 aa12.29□□□□□ -0.44
PPFIA3-206ENST00000602655 ENSAO43768 121 aaKnown RBP12.28□□□□□ -0.44
PPFIA3-206ENST00000602655 CACNG8Q8WXS5 425 aa12.28□□□□□ -0.44
PPFIA3-206ENST00000602655 LOC107984156A0A0G2JMH3 177 aa12.28□□□□□ -0.44
PPFIA3-206ENST00000602655 FOXI2Q6ZQN5 318 aa12.28□□□□□ -0.44
PPFIA3-206ENST00000602655 ARL17AQ8IVW1 177 aa12.28□□□□□ -0.44
PPFIA3-206ENST00000602655 CITED1Q99966 193 aa12.28□□□□□ -0.44
PPFIA3-206ENST00000602655 ZNF134P52741 427 aa12.28□□□□□ -0.44
PPFIA3-206ENST00000602655 GTSF1Q8WW33 167 aa12.28□□□□□ -0.44
PPFIA3-206ENST00000602655 SLC25A33Q9BSK2 321 aa12.28□□□□□ -0.44
PPFIA3-206ENST00000602655 HCFC1P51610 2035 aa12.27□□□□□ -0.44
PPFIA3-206ENST00000602655 TRBV20-1A0A075B6N2 111 aa12.27□□□□□ -0.44
PPFIA3-206ENST00000602655 OOEPA6NGQ2 149 aa12.27□□□□□ -0.44
PPFIA3-206ENST00000602655 ORM2P19652 201 aa12.27□□□□□ -0.44
PPFIA3-206ENST00000602655 CFHR2P36980 270 aa12.27□□□□□ -0.44
PPFIA3-206ENST00000602655 TEX29Q8N6K0 151 aa12.27□□□□□ -0.44
PPFIA3-206ENST00000602655 CHAC1Q9BUX1 264 aa12.27□□□□□ -0.44
PPFIA3-206ENST00000602655 PRSS29PA6NIE9 313 aa12.27□□□□□ -0.45
PPFIA3-206ENST00000602655 H3BVH4 76 aa12.27□□□□□ -0.45
PPFIA3-206ENST00000602655 PDPNQ86YL7 162 aa12.27□□□□□ -0.45
PPFIA3-206ENST00000602655 OSR1Q8TAX0 266 aaPredicted RBP12.27□□□□□ -0.45
PPFIA3-206ENST00000602655 C1orf159Q96HA4 380 aa12.27□□□□□ -0.45
PPFIA3-206ENST00000602655 JPT1Q9UK76 154 aa12.27□□□□□ -0.45
PPFIA3-206ENST00000602655 OR11H12B2RN74 326 aa12.27□□□□□ -0.45
PPFIA3-206ENST00000602655 SIVA1O15304 175 aa12.27□□□□□ -0.45
PPFIA3-206ENST00000602655 LOXL1Q08397 574 aaPredicted RBP12.27□□□□□ -0.45
PPFIA3-206ENST00000602655 OR11H1Q8NG94 326 aa12.27□□□□□ -0.45
PPFIA3-206ENST00000602655 OR11H2Q8NH07 326 aa12.27□□□□□ -0.45
PPFIA3-206ENST00000602655 ASCL2Q99929 193 aa12.27□□□□□ -0.45
PPFIA3-206ENST00000602655 CALYQ9NYX4 217 aa12.27□□□□□ -0.45
PPFIA3-206ENST00000602655 DKK2Q9UBU2 259 aa12.27□□□□□ -0.45
PPFIA3-206ENST00000602655 MOSP00540 346 aa12.26□□□□□ -0.45
PPFIA3-206ENST00000602655 PRR20EP86478 221 aa12.26□□□□□ -0.45
PPFIA3-206ENST00000602655 PRR20CP86479 221 aa12.26□□□□□ -0.45
PPFIA3-206ENST00000602655 PRR20DP86480 221 aa12.26□□□□□ -0.45
PPFIA3-206ENST00000602655 PRR20BP86481 221 aa12.26□□□□□ -0.45
PPFIA3-206ENST00000602655 PRR20AP86496 221 aa12.26□□□□□ -0.45
PPFIA3-206ENST00000602655 NRGNQ92686 78 aa12.26□□□□□ -0.45
PPFIA3-206ENST00000602655 HIST1H4GQ99525 98 aa12.26□□□□□ -0.45
PPFIA3-206ENST00000602655 HIF1ANQ9NWT6 349 aa12.26□□□□□ -0.45
PPFIA3-206ENST00000602655 SHISA9B4DS77 424 aa12.26□□□□□ -0.45
PPFIA3-206ENST00000602655 MZT1Q08AG7 82 aa12.26□□□□□ -0.45
PPFIA3-206ENST00000602655 FAM231DQ6ZW35 169 aa12.26□□□□□ -0.45
PPFIA3-206ENST00000602655 SRSF12Q8WXF0 261 aaKnown RBP12.26□□□□□ -0.45
PPFIA3-206ENST00000602655 PGPEP1Q9NXJ5 209 aa12.26□□□□□ -0.45
PPFIA3-206ENST00000602655 DSCAML1Q8TD84 2053 aa12.26□□□□□ -0.45
PPFIA3-206ENST00000602655 A0A1B0GXF2 115 aa12.25□□□□□ -0.45
PPFIA3-206ENST00000602655 NPIPB6E9PJ23 425 aa12.25□□□□□ -0.45
PPFIA3-206ENST00000602655 TGFAP01135 160 aa12.25□□□□□ -0.45
PPFIA3-206ENST00000602655 LINC00322Q6ZN03 302 aaPredicted RBP12.25□□□□□ -0.45
PPFIA3-206ENST00000602655 PRELID3AQ96N28 172 aa12.25□□□□□ -0.45
PPFIA3-206ENST00000602655 GPR82Q96P67 336 aa12.25□□□□□ -0.45
PPFIA3-206ENST00000602655 NDFIP1Q9BT67 221 aa12.25□□□□□ -0.45
PPFIA3-206ENST00000602655 C1QTNF4Q9BXJ3 329 aa12.25□□□□□ -0.45
PPFIA3-206ENST00000602655 C19orf84I3L1E1 186 aa12.25□□□□□ -0.45
PPFIA3-206ENST00000602655 ZFAND6Q6FIF0 208 aa12.25□□□□□ -0.45
PPFIA3-206ENST00000602655 GTSCR1Q86UQ5 136 aa12.25□□□□□ -0.45
PPFIA3-206ENST00000602655 IGLL5B9A064 214 aa12.25□□□□□ -0.45
PPFIA3-206ENST00000602655 IFI27L1Q96BM0 104 aa12.25□□□□□ -0.45
PPFIA3-206ENST00000602655 AGRNO00468 2067 aa12.24□□□□□ -0.45
PPFIA3-206ENST00000602655 TRAV8-1A0A0A6YYK1 113 aa12.24□□□□□ -0.45
PPFIA3-206ENST00000602655 TCRBV4S1A1TA0A5B7 111 aa12.24□□□□□ -0.45
PPFIA3-206ENST00000602655 DIAPH2-AS1Q14236 149 aa12.24□□□□□ -0.45
PPFIA3-206ENST00000602655 C10orf113Q5VZT2 155 aa12.24□□□□□ -0.45
PPFIA3-206ENST00000602655 ERG28Q9UKR5 140 aa12.24□□□□□ -0.45
PPFIA3-206ENST00000602655 TSPAN13O95857 204 aa12.24□□□□□ -0.45
PPFIA3-206ENST00000602655 HSPE1P61604 102 aaKnown RBP12.24□□□□□ -0.45
PPFIA3-206ENST00000602655 PRNTQ86SH4 94 aa12.24□□□□□ -0.45
PPFIA3-206ENST00000602655 PTH2Q96A98 100 aa12.24□□□□□ -0.45
PPFIA3-206ENST00000602655 ANKRD17O75179 2603 aaKnown RBP12.23□□□□□ -0.45
PPFIA3-206ENST00000602655 IGLV3-9A0A075B6K5 115 aa12.23□□□□□ -0.45
PPFIA3-206ENST00000602655 NDUFB3O43676 98 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms