RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 WFDC3Q8IUB2 231 aa13.13□□□□□ -0.31
DDX49-213ENST00000602113 TMEM61Q8N0U2 210 aa13.13□□□□□ -0.31
DDX49-213ENST00000602113 ATG101Q9BSB4 218 aa13.13□□□□□ -0.31
DDX49-213ENST00000602113 CARHSP1Q9Y2V2 147 aaKnown RBP13.13□□□□□ -0.31
DDX49-213ENST00000602113 S100A1P23297 94 aa13.12□□□□□ -0.31
DDX49-213ENST00000602113 LCN12Q6JVE5 192 aa13.12□□□□□ -0.31
DDX49-213ENST00000602113 SMIM7Q9BQ49 75 aa13.12□□□□□ -0.31
DDX49-213ENST00000602113 TRAV34A0A0B4J273 112 aa13.12□□□□□ -0.31
DDX49-213ENST00000602113 ZNF727A8MUV8 499 aa13.12□□□□□ -0.31
DDX49-213ENST00000602113 DIRC3C9JPN6 131 aa13.12□□□□□ -0.31
DDX49-213ENST00000602113 PRAC2D3DTV9 90 aa13.12□□□□□ -0.31
DDX49-213ENST00000602113 K7EQG2 157 aa13.12□□□□□ -0.31
DDX49-213ENST00000602113 ISLRO14498 428 aa13.12□□□□□ -0.31
DDX49-213ENST00000602113 SAP30O75446 220 aa13.12□□□□□ -0.31
DDX49-213ENST00000602113 RPL35P42766 123 aaKnown RBP13.12□□□□□ -0.31
DDX49-213ENST00000602113 PSG3Q16557 428 aa13.12□□□□□ -0.31
DDX49-213ENST00000602113 GUCA2BQ16661 112 aa13.12□□□□□ -0.31
DDX49-213ENST00000602113 GOLT1AQ6ZVE7 132 aa13.12□□□□□ -0.31
DDX49-213ENST00000602113 FAM24BQ8N5W8 94 aa13.12□□□□□ -0.31
DDX49-213ENST00000602113 PRELID1Q9Y255 219 aa13.12□□□□□ -0.31
DDX49-213ENST00000602113 VWFP04275 2813 aa13.11□□□□□ -0.31
DDX49-213ENST00000602113 COL6A5A8TX70 2615 aa13.11□□□□□ -0.31
DDX49-213ENST00000602113 STAB1Q9NY15 2570 aa13.11□□□□□ -0.31
DDX49-213ENST00000602113 TRBV20OR9-2A0A075B6H5 130 aa13.11□□□□□ -0.31
DDX49-213ENST00000602113 IZUMO1RA6ND01 250 aa13.11□□□□□ -0.31
DDX49-213ENST00000602113 DNASE2O00115 360 aaPredicted RBP13.11□□□□□ -0.31
DDX49-213ENST00000602113 TSPAN4O14817 238 aa13.11□□□□□ -0.31
DDX49-213ENST00000602113 AKR1C3P42330 323 aa13.11□□□□□ -0.31
DDX49-213ENST00000602113 SHISA2Q6UWI4 295 aa13.11□□□□□ -0.31
DDX49-213ENST00000602113 RBPMS2Q6ZRY4 209 aaKnown RBP13.11□□□□□ -0.31
DDX49-213ENST00000602113 KLF12Q9Y4X4 402 aa13.11□□□□□ -0.31
DDX49-213ENST00000602113 APOC3P02656 99 aa13.1□□□□□ -0.31
DDX49-213ENST00000602113 CSN1S1P47710 185 aa13.1□□□□□ -0.31
DDX49-213ENST00000602113 FAM74A3Q4VXF1 159 aa13.1□□□□□ -0.31
DDX49-213ENST00000602113 ARL6IP6Q8N6S5 226 aa13.1□□□□□ -0.31
DDX49-213ENST00000602113 MRPL53Q96EL3 112 aaKnown RBP13.1□□□□□ -0.31
DDX49-213ENST00000602113 SGK494Q96LW2 274 aa13.1□□□□□ -0.31
DDX49-213ENST00000602113 CLEC5AQ9NY25 188 aa13.1□□□□□ -0.31
DDX49-213ENST00000602113 IGKV2-40A0A087WW87 121 aaPredicted RBP13.09□□□□□ -0.31
DDX49-213ENST00000602113 IGKV2D-40P01614 121 aaPredicted RBP13.09□□□□□ -0.31
DDX49-213ENST00000602113 CNN1P51911 297 aaKnown RBP13.09□□□□□ -0.31
DDX49-213ENST00000602113 SAMD13Q5VXD3 122 aa13.09□□□□□ -0.31
DDX49-213ENST00000602113 TRAV8-1A0A0A6YYK1 113 aa13.08□□□□□ -0.31
DDX49-213ENST00000602113 IGLV1-51P01701 117 aa13.08□□□□□ -0.31
DDX49-213ENST00000602113 IGLV2-11P01706 119 aa13.08□□□□□ -0.31
DDX49-213ENST00000602113 PAFAH1B2P68402 229 aa13.08□□□□□ -0.31
DDX49-213ENST00000602113 TRAV25A0A0B4J276 109 aa13.08□□□□□ -0.32
DDX49-213ENST00000602113 PGPEP1LA6NFU8 196 aa13.08□□□□□ -0.32
DDX49-213ENST00000602113 ID1P41134 155 aa13.08□□□□□ -0.32
DDX49-213ENST00000602113 DEFB1P60022 68 aa13.08□□□□□ -0.32
DDX49-213ENST00000602113 TMEM183BQ1AE95 376 aa13.08□□□□□ -0.32
DDX49-213ENST00000602113 TMEM241Q24JQ0 296 aa13.08□□□□□ -0.32
DDX49-213ENST00000602113 ZNF738Q8NE65 137 aa13.08□□□□□ -0.32
DDX49-213ENST00000602113 IGF2BP2-AS1Q96M15 143 aa13.08□□□□□ -0.32
DDX49-213ENST00000602113 NIPSNAP3BQ9BS92 247 aa13.08□□□□□ -0.32
DDX49-213ENST00000602113 TRAV2A0A0B4J234 112 aa13.07□□□□□ -0.32
DDX49-213ENST00000602113 ZNF688P0C7X2 276 aa13.07□□□□□ -0.32
DDX49-213ENST00000602113 TAS2R60P59551 318 aa13.07□□□□□ -0.32
DDX49-213ENST00000602113 CENPWQ5EE01 88 aa13.07□□□□□ -0.32
DDX49-213ENST00000602113 VGLL1Q99990 258 aa13.07□□□□□ -0.32
DDX49-213ENST00000602113 SDF2L1Q9HCN8 221 aa13.07□□□□□ -0.32
DDX49-213ENST00000602113 NAT8Q9UHE5 227 aa13.07□□□□□ -0.32
DDX49-213ENST00000602113 C9JCJ5 164 aa13.06□□□□□ -0.32
DDX49-213ENST00000602113 TMEM75Q8N9X5 138 aa13.06□□□□□ -0.32
DDX49-213ENST00000602113 FMC1Q96HJ9 113 aa13.06□□□□□ -0.32
DDX49-213ENST00000602113 SPAG8Q99932 426 aaPredicted RBP13.06□□□□□ -0.32
DDX49-213ENST00000602113 ZNF256Q9Y2P7 627 aaPredicted RBP13.06□□□□□ -0.32
DDX49-213ENST00000602113 SERTM2A0A1B0GWG4 89 aa13.05□□□□□ -0.32
DDX49-213ENST00000602113 K7EQM0 130 aa13.05□□□□□ -0.32
DDX49-213ENST00000602113 GNG4P50150 75 aa13.05□□□□□ -0.32
DDX49-213ENST00000602113 UBE2G1P62253 170 aa13.05□□□□□ -0.32
DDX49-213ENST00000602113 ERCC8Q13216 396 aa13.05□□□□□ -0.32
DDX49-213ENST00000602113 PSMG4Q5JS54 123 aa13.05□□□□□ -0.32
DDX49-213ENST00000602113 WFDC9Q8NEX5 89 aa13.05□□□□□ -0.32
DDX49-213ENST00000602113 ASCL2Q99929 193 aa13.05□□□□□ -0.32
DDX49-213ENST00000602113 AURKAIP1Q9NWT8 199 aaPredicted RBP13.05□□□□□ -0.32
DDX49-213ENST00000602113 F6UB75 175 aa13.05□□□□□ -0.32
DDX49-213ENST00000602113 IGLV2-8P01709 118 aa13.05□□□□□ -0.32
DDX49-213ENST00000602113 S100A9P06702 114 aaKnown RBP13.05□□□□□ -0.32
DDX49-213ENST00000602113 ZNF705DP0CH99 300 aaPredicted RBP13.05□□□□□ -0.32
DDX49-213ENST00000602113 ZNF705BP0CI00 300 aaPredicted RBP13.05□□□□□ -0.32
DDX49-213ENST00000602113 SNRPD3P62318 126 aaKnown RBP13.05□□□□□ -0.32
DDX49-213ENST00000602113 Q86TA4 180 aa13.05□□□□□ -0.32
DDX49-213ENST00000602113 OCC1Q8TAD7 63 aa13.05□□□□□ -0.32
DDX49-213ENST00000602113 TVP23CQ96ET8 276 aa13.05□□□□□ -0.32
DDX49-213ENST00000602113 MDFIQ99750 246 aa13.05□□□□□ -0.32
DDX49-213ENST00000602113 PSG8Q9UQ74 426 aa13.05□□□□□ -0.32
DDX49-213ENST00000602113 TRBV6-1A0A0K0K1D8 114 aa13.04□□□□□ -0.32
DDX49-213ENST00000602113 RBAKDNA6NC62 111 aa13.04□□□□□ -0.32
DDX49-213ENST00000602113 LTAP01374 205 aa13.04□□□□□ -0.32
DDX49-213ENST00000602113 RPL23P62829 140 aaKnown RBP13.04□□□□□ -0.32
DDX49-213ENST00000602113 FLI1Q01543 452 aaPredicted RBP13.04□□□□□ -0.32
DDX49-213ENST00000602113 PRNTQ86SH4 94 aa13.04□□□□□ -0.32
DDX49-213ENST00000602113 LINC01551Q86U37 167 aa13.04□□□□□ -0.32
DDX49-213ENST00000602113 BAGE2Q86Y30 109 aa13.04□□□□□ -0.32
DDX49-213ENST00000602113 SVBPQ8N300 66 aa13.04□□□□□ -0.32
DDX49-213ENST00000602113 OR2K2Q8NGT1 345 aa13.04□□□□□ -0.32
DDX49-213ENST00000602113 OR4C46A6NHA9 309 aa13.03□□□□□ -0.32
DDX49-213ENST00000602113 CD33P20138 364 aa13.03□□□□□ -0.32
DDX49-213ENST00000602113 ATRAIDQ6UW56 229 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms