RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 RBMY1A1P0DJD3 496 aaKnown RBP9.27□□□□□ -0.93
USE1-209ENST00000601592 RBMY1CP0DJD4 496 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 M6PRP20645 277 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 ATP6V0CP27449 155 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 NANOS2P60321 138 aaKnown RBP9.27□□□□□ -0.93
USE1-209ENST00000601592 RAB2AP61019 212 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 PDE6HQ13956 83 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 RBMY1FQ15415 496 aaKnown RBP9.27□□□□□ -0.93
USE1-209ENST00000601592 BAP18Q8IXM2 172 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 EXOC3-AS1Q8N2X6 119 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 C11orf45Q8TAV5 145 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 RNF141Q8WVD5 230 aa9.27□□□□□ -0.93
USE1-209ENST00000601592 BORCS7-ASMTA0A0B4J1R7 106 aa9.26□□□□□ -0.93
USE1-209ENST00000601592 G3V3Q6 166 aa9.26□□□□□ -0.93
USE1-209ENST00000601592 HMGB3O15347 200 aaKnown RBP9.26□□□□□ -0.93
USE1-209ENST00000601592 NDUFB4O95168 129 aa9.26□□□□□ -0.93
USE1-209ENST00000601592 EMP1P54849 157 aa9.26□□□□□ -0.93
USE1-209ENST00000601592 ICAM4Q14773 271 aa9.26□□□□□ -0.93
USE1-209ENST00000601592 RPL7L1Q6DKI1 246 aaKnown RBP9.26□□□□□ -0.93
USE1-209ENST00000601592 OR10G4Q8NGN3 311 aa9.26□□□□□ -0.93
USE1-209ENST00000601592 OR10G9Q8NGN4 311 aa9.26□□□□□ -0.93
USE1-209ENST00000601592 OR10G7Q8NGN6 311 aa9.26□□□□□ -0.93
USE1-209ENST00000601592 FXYD5Q96DB9 178 aa9.26□□□□□ -0.93
USE1-209ENST00000601592 IGF2BP2-AS1Q96M15 143 aa9.26□□□□□ -0.93
USE1-209ENST00000601592 SH3BGRL3Q9H299 93 aa9.26□□□□□ -0.93
USE1-209ENST00000601592 J3KRW8 73 aa9.25□□□□□ -0.93
USE1-209ENST00000601592 HBE1P02100 147 aa9.25□□□□□ -0.93
USE1-209ENST00000601592 ZNF705AQ6ZN79 300 aaPredicted RBP9.25□□□□□ -0.93
USE1-209ENST00000601592 C1orf158Q8N1D5 194 aa9.25□□□□□ -0.93
USE1-209ENST00000601592 PHYHIPLQ96FC7 376 aa9.25□□□□□ -0.93
USE1-209ENST00000601592 PRELID1Q9Y255 219 aa9.25□□□□□ -0.93
USE1-209ENST00000601592 TENM2Q9NT68 2774 aa9.25□□□□□ -0.93
USE1-209ENST00000601592 NUPR2A6NF83 97 aa9.24□□□□□ -0.93
USE1-209ENST00000601592 CDC34P49427 236 aaPredicted RBP9.24□□□□□ -0.93
USE1-209ENST00000601592 RANP62826 216 aaKnown RBP9.24□□□□□ -0.93
USE1-209ENST00000601592 RPP25LQ8N5L8 163 aaKnown RBP9.24□□□□□ -0.93
USE1-209ENST00000601592 PHLDA1Q8WV24 401 aaPredicted RBP9.24□□□□□ -0.93
USE1-209ENST00000601592 MRPL53Q96EL3 112 aaKnown RBP9.24□□□□□ -0.93
USE1-209ENST00000601592 ZNF503Q96F45 646 aa9.24□□□□□ -0.93
USE1-209ENST00000601592 PSMG3Q9BT73 122 aaPredicted RBP9.24□□□□□ -0.93
USE1-209ENST00000601592 CSMD3Q7Z407 3707 aa9.23□□□□□ -0.93
USE1-209ENST00000601592 IGKV2-40A0A087WW87 121 aaPredicted RBP9.23□□□□□ -0.93
USE1-209ENST00000601592 SMIM9A6NGZ8 99 aa9.23□□□□□ -0.93
USE1-209ENST00000601592 CRXO43186 299 aaPredicted RBP9.23□□□□□ -0.93
USE1-209ENST00000601592 IGKV2D-40P01614 121 aaPredicted RBP9.23□□□□□ -0.93
USE1-209ENST00000601592 TSPOP30536 169 aa9.23□□□□□ -0.93
USE1-209ENST00000601592 CDKN1BP46527 198 aa9.23□□□□□ -0.93
USE1-209ENST00000601592 ERCC8Q13216 396 aa9.23□□□□□ -0.93
USE1-209ENST00000601592 RRN3P1Q2M238 152 aa9.23□□□□□ -0.93
USE1-209ENST00000601592 ZNF767PQ75MW2 155 aa9.23□□□□□ -0.93
USE1-209ENST00000601592 OR2G3Q8NGZ4 309 aa9.23□□□□□ -0.93
USE1-209ENST00000601592 GNPNAT1Q96EK6 184 aaPredicted RBP9.23□□□□□ -0.93
USE1-209ENST00000601592 NEU1Q99519 415 aa9.23□□□□□ -0.93
USE1-209ENST00000601592 CELA1Q9UNI1 258 aa9.23□□□□□ -0.93
USE1-209ENST00000601592 LOC102723971A0A1B0GUV8 181 aa9.22□□□□□ -0.93
USE1-209ENST00000601592 ZNF705GA8MUZ8 300 aaPredicted RBP9.22□□□□□ -0.93
USE1-209ENST00000601592 NPIPB6E9PJ23 425 aa9.22□□□□□ -0.93
USE1-209ENST00000601592 MBP02144 154 aa9.22□□□□□ -0.93
USE1-209ENST00000601592 ARL14EPLP0DKL9 152 aa9.22□□□□□ -0.93
USE1-209ENST00000601592 CT45A10P0DMU9 189 aa9.22□□□□□ -0.93
USE1-209ENST00000601592 HTN1P15515 57 aa9.22□□□□□ -0.93
USE1-209ENST00000601592 LEPP41159 167 aa9.22□□□□□ -0.93
USE1-209ENST00000601592 CSN1S1P47710 185 aa9.22□□□□□ -0.93
USE1-209ENST00000601592 SERF2P84101 59 aa9.22□□□□□ -0.93
USE1-209ENST00000601592 CEMP1Q6PRD7 247 aaPredicted RBP9.22□□□□□ -0.93
USE1-209ENST00000601592 PQLC2Q6ZP29 291 aa9.22□□□□□ -0.93
USE1-209ENST00000601592 HYLS1Q96M11 299 aa9.22□□□□□ -0.93
USE1-209ENST00000601592 LINC01587Q99440 93 aa9.22□□□□□ -0.93
USE1-209ENST00000601592 Q9H3A6 140 aa9.22□□□□□ -0.93
USE1-209ENST00000601592 RPH3ALQ9UNE2 315 aa9.22□□□□□ -0.93
USE1-209ENST00000601592 KLK5Q9Y337 293 aaPredicted RBP9.22□□□□□ -0.93
USE1-209ENST00000601592 TMEM189A5PLL7 270 aa9.21□□□□□ -0.94
USE1-209ENST00000601592 TAAR5O14804 337 aa9.21□□□□□ -0.94
USE1-209ENST00000601592 PRM2P04554 102 aa9.21□□□□□ -0.94
USE1-209ENST00000601592 KIR3DS1Q14943 382 aa9.21□□□□□ -0.94
USE1-209ENST00000601592 TMEM78Q5T7P6 136 aa9.21□□□□□ -0.94
USE1-209ENST00000601592 IQCF2Q8IXL9 164 aa9.21□□□□□ -0.94
USE1-209ENST00000601592 RAB24Q969Q5 203 aa9.21□□□□□ -0.94
USE1-209ENST00000601592 ARPC5LQ9BPX5 153 aa9.21□□□□□ -0.94
USE1-209ENST00000601592 ACTR3CQ9C0K3 210 aaPredicted RBP9.21□□□□□ -0.94
USE1-209ENST00000601592 STARD9Q9P2P6 4700 aa9.21□□□□□ -0.94
USE1-209ENST00000601592 hCG_2014768A0A024R1R8 64 aa9.2□□□□□ -0.94
USE1-209ENST00000601592 JTBO76095 146 aa9.2□□□□□ -0.94
USE1-209ENST00000601592 AKR1C8PQ5T2L2 129 aa9.2□□□□□ -0.94
USE1-209ENST00000601592 GFI1BQ5VTD9 330 aa9.2□□□□□ -0.94
USE1-209ENST00000601592 Q6ZTC4 211 aa9.2□□□□□ -0.94
USE1-209ENST00000601592 TMEM256Q8N2U0 113 aa9.2□□□□□ -0.94
USE1-209ENST00000601592 OR11H4Q8NGC9 324 aa9.2□□□□□ -0.94
USE1-209ENST00000601592 ODF3Q96PU9 254 aa9.2□□□□□ -0.94
USE1-209ENST00000601592 AGPAT4-IT1Q9H0P7 198 aa9.2□□□□□ -0.94
USE1-209ENST00000601592 YTHDF2Q9Y5A9 579 aaKnown RBP9.2□□□□□ -0.94
USE1-209ENST00000601592 TRAV12-3A0A0B4J271 114 aa9.19□□□□□ -0.94
USE1-209ENST00000601592 KANTRA0A1W2PQU2 76 aa9.19□□□□□ -0.94
USE1-209ENST00000601592 PGPA6NDG6 321 aa9.19□□□□□ -0.94
USE1-209ENST00000601592 STAG3L2P0CL84 134 aa9.19□□□□□ -0.94
USE1-209ENST00000601592 STAG3L3P0CL85 134 aa9.19□□□□□ -0.94
USE1-209ENST00000601592 SPART-AS1P0CW21 52 aa9.19□□□□□ -0.94
USE1-209ENST00000601592 ZNF345Q14585 488 aa9.19□□□□□ -0.94
USE1-209ENST00000601592 FAM74A1Q5RGS3 127 aa9.19□□□□□ -0.94
USE1-209ENST00000601592 FAM222AQ5U5X8 452 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms