RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 Q71RC1 249 aaPredicted RBP9.09□□□□□ -0.95
VRK3-223ENST00000601341 NUP35Q8NFH5 326 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 SLC25A39Q9BZJ4 359 aaPredicted RBP9.09□□□□□ -0.95
VRK3-223ENST00000601341 Q9H3A6 140 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 GSX1Q9H4S2 264 aaPredicted RBP9.09□□□□□ -0.95
VRK3-223ENST00000601341 FBXL7Q9UJT9 491 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 ANK3Q12955 4377 aaKnown RBP9.08□□□□□ -0.96
VRK3-223ENST00000601341 A0A1B0GXF2 115 aa9.08□□□□□ -0.96
VRK3-223ENST00000601341 NPIPB6E9PJ23 425 aa9.08□□□□□ -0.96
VRK3-223ENST00000601341 ZNF324O75467 553 aaPredicted RBP9.08□□□□□ -0.96
VRK3-223ENST00000601341 IGKV1-17P01599 117 aa9.08□□□□□ -0.96
VRK3-223ENST00000601341 PPIFP30405 207 aaKnown RBP9.08□□□□□ -0.96
VRK3-223ENST00000601341 SSTP61278 116 aa9.08□□□□□ -0.96
VRK3-223ENST00000601341 SHANK2-AS3Q9BTD1 123 aa9.08□□□□□ -0.96
VRK3-223ENST00000601341 RPP21Q9H633 154 aaKnown RBP9.08□□□□□ -0.96
VRK3-223ENST00000601341 ZNF702PQ9H963 129 aa9.08□□□□□ -0.96
VRK3-223ENST00000601341 HIGD1CA8MV81 97 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 INAFM1C9JVW0 142 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 H3BUA1 57 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 NDUFB8O95169 186 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 BRI3O95415 125 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 FRMD6-AS1P0C7T7 363 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 SRIP30626 198 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 TCL1AP56279 114 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 RHOGP84095 191 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 PDE6HQ13956 83 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 MRPL54Q6P161 138 aaKnown RBP9.07□□□□□ -0.96
VRK3-223ENST00000601341 TOMM20LQ6UXN7 152 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 BPIFA4PQ86YQ2 179 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 Q8N2B8 174 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 VN1R17PQ8TDU5 208 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 NEU1Q99519 415 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 ESM1Q9NQ30 184 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 TRAV34A0A0B4J273 112 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 A0A1W2PS18 150 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 FAM181BA6NEQ2 426 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 RAB4AP20338 218 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 MFAP4P55083 255 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 FOXA3P55318 350 aaPredicted RBP9.07□□□□□ -0.96
VRK3-223ENST00000601341 HILS1P60008 231 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 BLNKQ8WV28 456 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 JMJD8Q96S16 334 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 C21orf62Q9NYP8 219 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 ZFP30Q9Y2G7 519 aa9.07□□□□□ -0.96
VRK3-223ENST00000601341 SERTM2A0A1B0GWG4 89 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 FAM223BA6NKX1 122 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 H3BRN7 92 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 K7EQM0 130 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 SCGB2A1O75556 95 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 P01737 135 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 RNASE1P07998 156 aaKnown RBP9.06□□□□□ -0.96
VRK3-223ENST00000601341 S100A7P31151 101 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 AMTP48728 403 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 LYZP61626 148 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 GNG5P63218 68 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 HBBP68871 147 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 CFHR3Q02985 330 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 C15orf32Q32M92 178 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 TMEM95Q3KNT9 176 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 C16orf54Q6UWD8 224 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 FAM223AQ8IWN6 122 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 TMEM75Q8N9X5 138 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 NHLRC2Q8NBF2 726 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 OR4F17Q8NGA8 305 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 C18orf32Q8TCD1 76 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 DAZAP1Q96EP5 407 aaKnown RBP9.06□□□□□ -0.96
VRK3-223ENST00000601341 TXN2Q99757 166 aa9.06□□□□□ -0.96
VRK3-223ENST00000601341 TRBV19A0A075B6N1 114 aa9.05□□□□□ -0.96
VRK3-223ENST00000601341 WI2-2373I1.2A0A1W2PRP0 233 aa9.05□□□□□ -0.96
VRK3-223ENST00000601341 FBLL1A6NHQ2 334 aaKnown RBP9.05□□□□□ -0.96
VRK3-223ENST00000601341 ZNF705FA8MVS1 300 aaPredicted RBP9.05□□□□□ -0.96
VRK3-223ENST00000601341 IGLV1-40P01703 118 aa9.05□□□□□ -0.96
VRK3-223ENST00000601341 TRGV3P03979 118 aa9.05□□□□□ -0.96
VRK3-223ENST00000601341 ZNF705DP0CH99 300 aaPredicted RBP9.05□□□□□ -0.96
VRK3-223ENST00000601341 ZNF705BP0CI00 300 aaPredicted RBP9.05□□□□□ -0.96
VRK3-223ENST00000601341 FCGR2BP31994 310 aaPredicted RBP9.05□□□□□ -0.96
VRK3-223ENST00000601341 SLAQ13239 276 aa9.05□□□□□ -0.96
VRK3-223ENST00000601341 RBPMS2Q6ZRY4 209 aaKnown RBP9.05□□□□□ -0.96
VRK3-223ENST00000601341 Q86TA4 180 aa9.05□□□□□ -0.96
VRK3-223ENST00000601341 VAMP8Q9BV40 100 aa9.05□□□□□ -0.96
VRK3-223ENST00000601341 NRN1Q9NPD7 142 aa9.05□□□□□ -0.96
VRK3-223ENST00000601341 TMEM89A2RUT3 159 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 GNG7O60262 68 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 SPINK4O60575 86 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 CA1P00915 261 aaPredicted RBP9.04□□□□□ -0.96
VRK3-223ENST00000601341 IGHG4P01861 327 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 IGLC2P0DOY2 106 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 PF4V1P10720 104 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 SLC35B1P78383 322 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 ATP5G2Q06055 141 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 Q56UQ5 140 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 ZNF491Q8N8L2 437 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 MIEN1Q9BRT3 115 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 ALKBH7Q9BT30 221 aaPredicted RBP9.04□□□□□ -0.96
VRK3-223ENST00000601341 TRBV7-1A0A0A6YYK4 115 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 A0A1B0GW15 77 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 M0R143 59 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 CRLF1O75462 422 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 IGLV2-11P01706 119 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 Q6AWC8 147 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms