RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 TRAV12-3A0A0B4J271 114 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 PIGBOS1A0A0B4J2F0 54 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 SNURFLB1AK76 121 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 NPIPB6E9PJ23 425 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 FNDC10F2Z333 226 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 H3BTX0 84 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 SFT2D2O95562 160 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 RLN2P04090 185 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 HOXB5P09067 269 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 IGLC2P0DOY2 106 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 TNFSF8P32971 234 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 POLR2GP62487 172 aaKnown RBP eCLIP4.13□□□□□ -1.75
VRK3-220ENST00000600259 AKR1C1Q04828 323 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 ARL16Q0P5N6 197 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 PPP1R1AQ13522 171 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 ICAM4Q14773 271 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 TEPPQ6URK8 271 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 LCN15Q6UWW0 184 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 TMEM14EPQ6UXP3 125 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 CCDC190Q86UF4 302 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 TRIM63Q969Q1 353 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 SMIM8Q96KF7 97 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 FAM19A4Q96LR4 140 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 ODF3Q96PU9 254 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 PYGO2Q9BRQ0 406 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 LINC00467Q9BRT7 94 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 ARL6Q9H0F7 186 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 NPVFQ9HCQ7 196 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 MCUBQ9NWR8 336 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 RSL24D1Q9UHA3 163 aaKnown RBP4.13□□□□□ -1.75
VRK3-220ENST00000600259 KLF12Q9Y4X4 402 aa4.13□□□□□ -1.75
VRK3-220ENST00000600259 LRP1Q07954 4544 aaKnown RBP4.12□□□□□ -1.75
VRK3-220ENST00000600259 LRCOL1A6NCL2 159 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 KLLNB2CW77 178 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 EREGO14944 169 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 SPINK4O60575 86 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 ANXA7P20073 488 aaKnown RBP4.12□□□□□ -1.75
VRK3-220ENST00000600259 GCSHP23434 173 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 VAMP1P23763 118 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 CRYBA4P53673 196 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 ERVFC1-1P60608 527 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 HAMPP81172 84 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 CD300CQ08708 224 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 FHL2Q14192 279 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 OPCMLQ14982 345 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 ANXA2RQ3ZCQ2 193 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 PXDC1Q5TGL8 231 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 Q6ZQT7 251 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 LINC00305Q7Z4B0 112 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 LRRC20Q8TCA0 184 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 SLC25A21Q9BQT8 299 aaPredicted RBP4.12□□□□□ -1.75
VRK3-220ENST00000600259 SLC50A1Q9BRV3 221 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 MRPS26Q9BYN8 205 aaKnown RBP4.12□□□□□ -1.75
VRK3-220ENST00000600259 SLIRPQ9GZT3 109 aaKnown RBP4.12□□□□□ -1.75
VRK3-220ENST00000600259 RBM38Q9H0Z9 239 aaKnown RBP4.12□□□□□ -1.75
VRK3-220ENST00000600259 PSENENQ9NZ42 101 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 FAM30AQ9NZY2 134 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 FUT9Q9Y231 359 aa4.12□□□□□ -1.75
VRK3-220ENST00000600259 HMCN2Q8NDA2 5059 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 TRGV2A0A075B6R0 118 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 TRGV1A0A0A0MS02 117 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 TRAV5A0A0B4J249 113 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 SMCO3A2RU48 225 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 C7orf71A4D174 169 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 FABP12A6NFH5 140 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 FAM229AH3BQW9 127 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 J3KRW8 73 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 AGPAT2O15120 278 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 PAX4O43316 350 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 PRAF2O60831 178 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 IFNA5P01569 189 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 SLC25A5P05141 298 aaKnown RBP4.11□□□□□ -1.75
VRK3-220ENST00000600259 METTL15P1P0C7V9 234 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 LEPP41159 167 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 TCL1AP56279 114 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 RRAS2P62070 204 aaPredicted RBP4.11□□□□□ -1.75
VRK3-220ENST00000600259 SLC38A11Q08AI6 406 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 ERCC8Q13216 396 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 NFE4Q86UQ8 179 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 BPIFA4PQ86YQ2 179 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 ST6GAL2Q96JF0 529 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 TMEM70Q9BUB7 260 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 AGPAT4-IT1Q9H0P7 198 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 CCDC59Q9P031 241 aaKnown RBP4.11□□□□□ -1.75
VRK3-220ENST00000600259 PRO0255Q9UI72 69 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 TP53TG3Q9ULZ0 132 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 PXMP4Q9Y6I8 212 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 ICOSQ9Y6W8 199 aa4.11□□□□□ -1.75
VRK3-220ENST00000600259 A0A1B0GVG6 124 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 C9orf170A2RU37 121 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 KRTAP29-1A8MX34 341 aaPredicted RBP4.1□□□□□ -1.75
VRK3-220ENST00000600259 K7EP13 123 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 M0R3E3 92 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 GOSR2O14653 212 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 NDUFB4O95168 129 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 IGHV3-53P01767 116 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 CRISP2P16562 243 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 TAS2R30P59541 319 aa4.1□□□□□ -1.75
VRK3-220ENST00000600259 MRPL23Q16540 153 aaKnown RBP4.1□□□□□ -1.75
VRK3-220ENST00000600259 IBA57Q5T440 356 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms