RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 AZU1P20160 251 aa12.69□□□□□ -0.38
CHMP2A-203ENST00000597209 FGF7P21781 194 aa12.69□□□□□ -0.38
CHMP2A-203ENST00000597209 CYCSP99999 105 aaKnown RBP12.69□□□□□ -0.38
CHMP2A-203ENST00000597209 SLC25A31Q9H0C2 315 aa12.69□□□□□ -0.38
CHMP2A-203ENST00000597209 TMEM14CQ9P0S9 112 aa12.69□□□□□ -0.38
CHMP2A-203ENST00000597209 PRAC2D3DTV9 90 aa12.68□□□□□ -0.38
CHMP2A-203ENST00000597209 INMT-MINDY4F8WBC2 141 aa12.68□□□□□ -0.38
CHMP2A-203ENST00000597209 H3BTX0 84 aa12.68□□□□□ -0.38
CHMP2A-203ENST00000597209 ZNF493Q6ZR52 646 aa12.68□□□□□ -0.38
CHMP2A-203ENST00000597209 C16orf74Q96GX8 76 aa12.68□□□□□ -0.38
CHMP2A-203ENST00000597209 ODF3Q96PU9 254 aa12.68□□□□□ -0.38
CHMP2A-203ENST00000597209 ZNF586Q9NXT0 402 aa12.68□□□□□ -0.38
CHMP2A-203ENST00000597209 H7BYZ3 331 aa12.67□□□□□ -0.38
CHMP2A-203ENST00000597209 SIX6O95475 246 aa12.67□□□□□ -0.38
CHMP2A-203ENST00000597209 HTN3P15516 51 aa12.67□□□□□ -0.38
CHMP2A-203ENST00000597209 NHLH2Q02577 135 aa12.67□□□□□ -0.38
CHMP2A-203ENST00000597209 RNF212Q495C1 297 aa12.67□□□□□ -0.38
CHMP2A-203ENST00000597209 MRPL53Q96EL3 112 aaKnown RBP12.67□□□□□ -0.38
CHMP2A-203ENST00000597209 MARVELD1Q9BSK0 173 aa12.67□□□□□ -0.38
CHMP2A-203ENST00000597209 NPCDR1Q9BY65 106 aa12.67□□□□□ -0.38
CHMP2A-203ENST00000597209 TRBV19A0A075B6N1 114 aa12.66□□□□□ -0.38
CHMP2A-203ENST00000597209 NPIPB6E9PJ23 425 aa12.66□□□□□ -0.38
CHMP2A-203ENST00000597209 PRB4P10163 310 aaPredicted RBP12.66□□□□□ -0.38
CHMP2A-203ENST00000597209 HIST1H1EP10412 219 aaKnown RBP12.66□□□□□ -0.38
CHMP2A-203ENST00000597209 TMEM88Q6PEY1 159 aa12.66□□□□□ -0.38
CHMP2A-203ENST00000597209 LINC00336Q6ZUF6 198 aa12.66□□□□□ -0.38
CHMP2A-203ENST00000597209 C15orf53Q8NAA6 179 aa12.66□□□□□ -0.38
CHMP2A-203ENST00000597209 OR5C1Q8NGR4 320 aa12.66□□□□□ -0.38
CHMP2A-203ENST00000597209 OR5AC2Q9NZP5 309 aa12.66□□□□□ -0.38
CHMP2A-203ENST00000597209 TIMM8BQ9Y5J9 83 aaPredicted RBP12.66□□□□□ -0.38
CHMP2A-203ENST00000597209 CBY3A6NI87 242 aa12.65□□□□□ -0.38
CHMP2A-203ENST00000597209 H0YIZ8 118 aa12.65□□□□□ -0.38
CHMP2A-203ENST00000597209 DEFB130BP0DP73 79 aa12.65□□□□□ -0.38
CHMP2A-203ENST00000597209 DEFB130AP0DP74 79 aa12.65□□□□□ -0.38
CHMP2A-203ENST00000597209 PDE6HQ13956 83 aa12.65□□□□□ -0.38
CHMP2A-203ENST00000597209 LGALS9BQ3B8N2 356 aa12.65□□□□□ -0.38
CHMP2A-203ENST00000597209 RNASE8Q8TDE3 154 aaKnown RBP12.65□□□□□ -0.38
CHMP2A-203ENST00000597209 TMEM263Q8WUH6 116 aaKnown RBP12.65□□□□□ -0.38
CHMP2A-203ENST00000597209 PRELID1Q9Y255 219 aa12.65□□□□□ -0.38
CHMP2A-203ENST00000597209 CT45A10P0DMU9 189 aa12.64□□□□□ -0.39
CHMP2A-203ENST00000597209 LEPP41159 167 aa12.64□□□□□ -0.39
CHMP2A-203ENST00000597209 KIR3DS1Q14943 382 aa12.64□□□□□ -0.39
CHMP2A-203ENST00000597209 GFI1BQ5VTD9 330 aa12.64□□□□□ -0.39
CHMP2A-203ENST00000597209 NDUFB4O95168 129 aa12.63□□□□□ -0.39
CHMP2A-203ENST00000597209 ATP5G1P05496 136 aa12.63□□□□□ -0.39
CHMP2A-203ENST00000597209 HTN1P15515 57 aa12.63□□□□□ -0.39
CHMP2A-203ENST00000597209 ATP5G3P48201 142 aa12.63□□□□□ -0.39
CHMP2A-203ENST00000597209 DEFA1P59665 94 aa12.63□□□□□ -0.39
CHMP2A-203ENST00000597209 DEFA3P59666 94 aa12.63□□□□□ -0.39
CHMP2A-203ENST00000597209 FCN2Q15485 313 aa12.63□□□□□ -0.39
CHMP2A-203ENST00000597209 LRRC37A5PQ49AS3 106 aa12.63□□□□□ -0.39
CHMP2A-203ENST00000597209 UBE2DNLQ8IWF7 75 aa12.63□□□□□ -0.39
CHMP2A-203ENST00000597209 PARD6GQ9BYG4 376 aaPredicted RBP12.63□□□□□ -0.39
CHMP2A-203ENST00000597209 KCNIP2Q9NS61 270 aa12.63□□□□□ -0.39
CHMP2A-203ENST00000597209 H2BFSP57053 126 aa12.62□□□□□ -0.39
CHMP2A-203ENST00000597209 FAM3BP58499 235 aaPredicted RBP12.62□□□□□ -0.39
CHMP2A-203ENST00000597209 GCSAMLQ5JQS6 135 aa12.62□□□□□ -0.39
CHMP2A-203ENST00000597209 CCDC28AQ8IWP9 274 aa12.62□□□□□ -0.39
CHMP2A-203ENST00000597209 THAP6Q8TBB0 222 aa12.62□□□□□ -0.39
CHMP2A-203ENST00000597209 SLC25A2Q9BXI2 301 aa12.62□□□□□ -0.39
CHMP2A-203ENST00000597209 WDR61Q9GZS3 305 aaKnown RBP12.62□□□□□ -0.39
CHMP2A-203ENST00000597209 TIMM9Q9Y5J7 89 aa12.62□□□□□ -0.39
CHMP2A-203ENST00000597209 PYYP10082 97 aa12.61□□□□□ -0.39
CHMP2A-203ENST00000597209 CLINT1Q14677 625 aa12.61□□□□□ -0.39
CHMP2A-203ENST00000597209 LINC00612Q8N6U2 182 aa12.61□□□□□ -0.39
CHMP2A-203ENST00000597209 PPP1R1CQ8WVI7 109 aa12.61□□□□□ -0.39
CHMP2A-203ENST00000597209 FAM167A-AS1Q96KT0 104 aa12.61□□□□□ -0.39
CHMP2A-203ENST00000597209 LINC00477Q96M19 166 aa12.61□□□□□ -0.39
CHMP2A-203ENST00000597209 MRPL32Q9BYC8 188 aaKnown RBP12.61□□□□□ -0.39
CHMP2A-203ENST00000597209 NOP10Q9NPE3 64 aaKnown RBP12.61□□□□□ -0.39
CHMP2A-203ENST00000597209 C17orf112F2Z3M2 114 aa12.6□□□□□ -0.39
CHMP2A-203ENST00000597209 F5H768 121 aa12.6□□□□□ -0.39
CHMP2A-203ENST00000597209 M0R3E3 92 aa12.6□□□□□ -0.39
CHMP2A-203ENST00000597209 SLC25A5P05141 298 aaKnown RBP12.6□□□□□ -0.39
CHMP2A-203ENST00000597209 Q6ZR54 194 aa12.6□□□□□ -0.39
CHMP2A-203ENST00000597209 FAM19A4Q96LR4 140 aa12.6□□□□□ -0.39
CHMP2A-203ENST00000597209 PYGO2Q9BRQ0 406 aa12.6□□□□□ -0.39
CHMP2A-203ENST00000597209 HECTD4Q9Y4D8 3996 aa12.59□□□□□ -0.39
CHMP2A-203ENST00000597209 SSNA1O43805 119 aa12.59□□□□□ -0.39
CHMP2A-203ENST00000597209 MPC2O95563 127 aa12.59□□□□□ -0.39
CHMP2A-203ENST00000597209 PET100P0DJ07 73 aa12.59□□□□□ -0.39
CHMP2A-203ENST00000597209 MIR17HGQ75NE6 70 aa12.59□□□□□ -0.39
CHMP2A-203ENST00000597209 OR51M1Q9H341 326 aa12.59□□□□□ -0.39
CHMP2A-203ENST00000597209 AAMDCQ9H7C9 122 aa12.59□□□□□ -0.39
CHMP2A-203ENST00000597209 BATF3Q9NR55 127 aa12.59□□□□□ -0.39
CHMP2A-203ENST00000597209 TRAV12-3A0A0B4J271 114 aa12.58□□□□□ -0.4
CHMP2A-203ENST00000597209 M0R2N4 97 aa12.58□□□□□ -0.4
CHMP2A-203ENST00000597209 NBEAP1P0C6P0 100 aa12.58□□□□□ -0.4
CHMP2A-203ENST00000597209 ERCC8Q13216 396 aa12.58□□□□□ -0.4
CHMP2A-203ENST00000597209 C9orf47Q6ZRZ4 202 aa12.58□□□□□ -0.4
CHMP2A-203ENST00000597209 BLNKQ8WV28 456 aa12.58□□□□□ -0.4
CHMP2A-203ENST00000597209 ATP5SQ99766 215 aa12.58□□□□□ -0.4
CHMP2A-203ENST00000597209 LINC00467Q9BRT7 94 aa12.58□□□□□ -0.4
CHMP2A-203ENST00000597209 AGPAT4-IT1Q9H0P7 198 aa12.58□□□□□ -0.4
CHMP2A-203ENST00000597209 HSPB11Q9Y547 144 aa12.58□□□□□ -0.4
CHMP2A-203ENST00000597209 KLLNB2CW77 178 aa12.57□□□□□ -0.4
CHMP2A-203ENST00000597209 RTL8CO15255 209 aa12.57□□□□□ -0.4
CHMP2A-203ENST00000597209 NMBP08949 121 aa12.57□□□□□ -0.4
CHMP2A-203ENST00000597209 EXOC3-AS1Q8N2X6 119 aa12.57□□□□□ -0.4
CHMP2A-203ENST00000597209 FUT9Q9Y231 359 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms