RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 LINC00612Q8N6U2 182 aa11.15□□□□□ -0.62
LIM2-202ENST00000596399 GNPNAT1Q96EK6 184 aaPredicted RBP11.15□□□□□ -0.62
LIM2-202ENST00000596399 TRAV12-3A0A0B4J271 114 aa11.14□□□□□ -0.63
LIM2-202ENST00000596399 CT45A10P0DMU9 189 aa11.14□□□□□ -0.63
LIM2-202ENST00000596399 IGLC2P0DOY2 106 aa11.14□□□□□ -0.63
LIM2-202ENST00000596399 TAS2R30P59541 319 aa11.14□□□□□ -0.63
LIM2-202ENST00000596399 PXDC1Q5TGL8 231 aa11.14□□□□□ -0.63
LIM2-202ENST00000596399 C10orf113Q5VZT2 155 aa11.14□□□□□ -0.63
LIM2-202ENST00000596399 MIC13Q5XKP0 118 aa11.14□□□□□ -0.63
LIM2-202ENST00000596399 SPATA12Q7Z6I5 190 aa11.14□□□□□ -0.63
LIM2-202ENST00000596399 S100A7AQ86SG5 101 aa11.14□□□□□ -0.63
LIM2-202ENST00000596399 OR10J6PQ8NGY7 276 aa11.14□□□□□ -0.63
LIM2-202ENST00000596399 SAT2Q96F10 170 aaPredicted RBP11.14□□□□□ -0.63
LIM2-202ENST00000596399 SLC50A1Q9BRV3 221 aa11.14□□□□□ -0.63
LIM2-202ENST00000596399 M6PRP20645 277 aa11.13□□□□□ -0.63
LIM2-202ENST00000596399 KRTAP10-2P60368 255 aa11.13□□□□□ -0.63
LIM2-202ENST00000596399 RXFP4Q8TDU9 374 aa11.13□□□□□ -0.63
LIM2-202ENST00000596399 MITD1Q8WV92 249 aa11.13□□□□□ -0.63
LIM2-202ENST00000596399 TMPRSS5Q9H3S3 457 aa11.13□□□□□ -0.63
LIM2-202ENST00000596399 CST7O76096 145 aa11.12□□□□□ -0.63
LIM2-202ENST00000596399 RLN2P04090 185 aa11.12□□□□□ -0.63
LIM2-202ENST00000596399 CAMLGP49069 296 aa11.12□□□□□ -0.63
LIM2-202ENST00000596399 Q6ZTI0 123 aa11.12□□□□□ -0.63
LIM2-202ENST00000596399 CCDC28AQ8IWP9 274 aa11.12□□□□□ -0.63
LIM2-202ENST00000596399 ZNF431Q8TF32 576 aaPredicted RBP11.12□□□□□ -0.63
LIM2-202ENST00000596399 C20orf144Q9BQM9 153 aa11.12□□□□□ -0.63
LIM2-202ENST00000596399 GGACTQ9BVM4 153 aa11.12□□□□□ -0.63
LIM2-202ENST00000596399 LSM5Q9Y4Y9 91 aaKnown RBP11.12□□□□□ -0.63
LIM2-202ENST00000596399 ERCC8Q13216 396 aa11.11□□□□□ -0.63
LIM2-202ENST00000596399 NRARPQ7Z6K4 114 aa11.11□□□□□ -0.63
LIM2-202ENST00000596399 DNAJC4Q9NNZ3 241 aa11.11□□□□□ -0.63
LIM2-202ENST00000596399 ZNF586Q9NXT0 402 aa11.11□□□□□ -0.63
LIM2-202ENST00000596399 FAM24AA6NFZ4 105 aa11.1□□□□□ -0.63
LIM2-202ENST00000596399 FAM25EA8MYX2 175 aa11.1□□□□□ -0.63
LIM2-202ENST00000596399 SNURFLB1AK76 121 aa11.1□□□□□ -0.63
LIM2-202ENST00000596399 NPIPB6E9PJ23 425 aa11.1□□□□□ -0.63
LIM2-202ENST00000596399 BCAP31P51572 246 aa11.1□□□□□ -0.63
LIM2-202ENST00000596399 Q9H3A6 140 aa11.1□□□□□ -0.63
LIM2-202ENST00000596399 C11orf1Q9H5F2 150 aa11.1□□□□□ -0.63
LIM2-202ENST00000596399 RNF24Q9Y225 148 aa11.1□□□□□ -0.63
LIM2-202ENST00000596399 PXMP4Q9Y6I8 212 aa11.1□□□□□ -0.63
LIM2-202ENST00000596399 CENPXA8MT69 81 aa11.09□□□□□ -0.63
LIM2-202ENST00000596399 L7N2F9 121 aa11.09□□□□□ -0.63
LIM2-202ENST00000596399 M0R3E3 92 aa11.09□□□□□ -0.63
LIM2-202ENST00000596399 PLA2G10O15496 165 aa11.09□□□□□ -0.63
LIM2-202ENST00000596399 IL7P13232 177 aa11.09□□□□□ -0.63
LIM2-202ENST00000596399 LEPP41159 167 aa11.09□□□□□ -0.63
LIM2-202ENST00000596399 CAV2P51636 162 aa11.09□□□□□ -0.63
LIM2-202ENST00000596399 VAMP2P63027 116 aa11.09□□□□□ -0.63
LIM2-202ENST00000596399 VSIG2Q96IQ7 327 aa11.09□□□□□ -0.63
LIM2-202ENST00000596399 SEC22CQ9BRL7 303 aa11.09□□□□□ -0.63
LIM2-202ENST00000596399 C20orf85Q9H1P6 137 aa11.09□□□□□ -0.63
LIM2-202ENST00000596399 GSN-AS1Q9NRJ2 163 aa11.09□□□□□ -0.63
LIM2-202ENST00000596399 CD300CQ08708 224 aa11.08□□□□□ -0.64
LIM2-202ENST00000596399 Q6ZQT7 251 aa11.08□□□□□ -0.64
LIM2-202ENST00000596399 ZNF503Q96F45 646 aa11.08□□□□□ -0.64
LIM2-202ENST00000596399 MRPS16Q9Y3D3 137 aaKnown RBP11.08□□□□□ -0.64
LIM2-202ENST00000596399 TRAV6A0A075B6T7 132 aa11.07□□□□□ -0.64
LIM2-202ENST00000596399 A0A096LPF7 62 aa11.07□□□□□ -0.64
LIM2-202ENST00000596399 NDUFB4O95168 129 aa11.07□□□□□ -0.64
LIM2-202ENST00000596399 FUSP35637 526 aaKnown RBP eCLIP11.07□□□□□ -0.64
LIM2-202ENST00000596399 DAZ2Q13117 558 aaKnown RBP11.07□□□□□ -0.64
LIM2-202ENST00000596399 BTN1A1Q13410 526 aa11.07□□□□□ -0.64
LIM2-202ENST00000596399 Q6ZRG5 221 aa11.07□□□□□ -0.64
LIM2-202ENST00000596399 Q8N1X5 172 aa11.07□□□□□ -0.64
LIM2-202ENST00000596399 C11orf72Q8NBR9 251 aa11.07□□□□□ -0.64
LIM2-202ENST00000596399 UPK3BQ9BT76 320 aa11.07□□□□□ -0.64
LIM2-202ENST00000596399 SCRT2Q9NQ03 307 aa11.07□□□□□ -0.64
LIM2-202ENST00000596399 UQCC1Q9NVA1 299 aa11.07□□□□□ -0.64
LIM2-202ENST00000596399 WDR83OSQ9Y284 106 aa11.07□□□□□ -0.64
LIM2-202ENST00000596399 TRBV19A0A075B6N1 114 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 UBE2L5PA0A1B0GUS4 154 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 IGSF23A1L1A6 192 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 C5orf51A6NDU8 294 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 PYYP10082 97 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 RAB31Q13636 194 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 ZNF846Q147U1 533 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 GUK1Q16774 197 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 TTC32Q5I0X7 151 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 GCSAMLQ5JQS6 135 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 EXOC3-AS1Q8N2X6 119 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 OR1L4Q8NGR5 311 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 ODF3Q96PU9 254 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 PYGO2Q9BRQ0 406 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 AGPAT4-IT1Q9H0P7 198 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 SLC39A9Q9NUM3 307 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 KLF12Q9Y4X4 402 aa11.06□□□□□ -0.64
LIM2-202ENST00000596399 TRGV2A0A075B6R0 118 aa11.05□□□□□ -0.64
LIM2-202ENST00000596399 TRGV1A0A0A0MS02 117 aa11.05□□□□□ -0.64
LIM2-202ENST00000596399 H3BNG1 76 aa11.05□□□□□ -0.64
LIM2-202ENST00000596399 ZNF324O75467 553 aaPredicted RBP11.05□□□□□ -0.64
LIM2-202ENST00000596399 RNASE4P34096 147 aaKnown RBP11.05□□□□□ -0.64
LIM2-202ENST00000596399 VWC2Q2TAL6 325 aa11.05□□□□□ -0.64
LIM2-202ENST00000596399 BLNKQ8WV28 456 aa11.05□□□□□ -0.64
LIM2-202ENST00000596399 TP53TG3Q9ULZ0 132 aa11.05□□□□□ -0.64
LIM2-202ENST00000596399 HERC1Q15751 4861 aa11.04□□□□□ -0.64
LIM2-202ENST00000596399 C7orf71A4D174 169 aa11.04□□□□□ -0.64
LIM2-202ENST00000596399 LYRM1O43325 122 aa11.04□□□□□ -0.64
LIM2-202ENST00000596399 TCRBP04435 133 aa11.04□□□□□ -0.64
LIM2-202ENST00000596399 SLC25A5P05141 298 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms