RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 TTC32Q5I0X7 151 aa11.03□□□□□ -0.64
LINC02560-201ENST00000596379 SPANXN2Q5MJ10 180 aa11.03□□□□□ -0.64
LINC02560-201ENST00000596379 ZBTB8BQ8NAP8 495 aaPredicted RBP11.03□□□□□ -0.64
LINC02560-201ENST00000596379 MGST2Q99735 147 aa11.03□□□□□ -0.64
LINC02560-201ENST00000596379 GGACTQ9BVM4 153 aa11.03□□□□□ -0.64
LINC02560-201ENST00000596379 RCL1Q9Y2P8 373 aaKnown RBP11.03□□□□□ -0.64
LINC02560-201ENST00000596379 C7orf66A4D0T2 115 aa11.02□□□□□ -0.65
LINC02560-201ENST00000596379 H3BQ15 152 aa11.02□□□□□ -0.65
LINC02560-201ENST00000596379 CT45A10P0DMU9 189 aa11.02□□□□□ -0.65
LINC02560-201ENST00000596379 OPCMLQ14982 345 aa11.02□□□□□ -0.65
LINC02560-201ENST00000596379 C10orf113Q5VZT2 155 aa11.02□□□□□ -0.65
LINC02560-201ENST00000596379 TRIQKQ629K1 86 aa11.02□□□□□ -0.65
LINC02560-201ENST00000596379 SAT2Q96F10 170 aaPredicted RBP11.02□□□□□ -0.65
LINC02560-201ENST00000596379 UPK3BQ9BT76 320 aa11.02□□□□□ -0.65
LINC02560-201ENST00000596379 Q9H3A6 140 aa11.02□□□□□ -0.65
LINC02560-201ENST00000596379 PXMP4Q9Y6I8 212 aa11.02□□□□□ -0.65
LINC02560-201ENST00000596379 TRAV12-3A0A0B4J271 114 aa11.01□□□□□ -0.65
LINC02560-201ENST00000596379 MBPP02686 304 aaPredicted RBP11.01□□□□□ -0.65
LINC02560-201ENST00000596379 IGLC2P0DOY2 106 aa11.01□□□□□ -0.65
LINC02560-201ENST00000596379 Q8N1X5 172 aa11.01□□□□□ -0.65
LINC02560-201ENST00000596379 ZNF431Q8TF32 576 aaPredicted RBP11.01□□□□□ -0.65
LINC02560-201ENST00000596379 DNAJC4Q9NNZ3 241 aa11.01□□□□□ -0.65
LINC02560-201ENST00000596379 APOBP04114 4563 aaKnown RBP11□□□□□ -0.65
LINC02560-201ENST00000596379 TRAV5A0A0B4J249 113 aa11□□□□□ -0.65
LINC02560-201ENST00000596379 H3BNG1 76 aa11□□□□□ -0.65
LINC02560-201ENST00000596379 LEPP41159 167 aa11□□□□□ -0.65
LINC02560-201ENST00000596379 KRTAP10-2P60368 255 aa11□□□□□ -0.65
LINC02560-201ENST00000596379 MITD1Q8WV92 249 aa11□□□□□ -0.65
LINC02560-201ENST00000596379 TMPRSS5Q9H3S3 457 aa11□□□□□ -0.65
LINC02560-201ENST00000596379 SCRT2Q9NQ03 307 aa11□□□□□ -0.65
LINC02560-201ENST00000596379 MRPS16Q9Y3D3 137 aaKnown RBP11□□□□□ -0.65
LINC02560-201ENST00000596379 A0A1W2PPQ1 181 aa10.99□□□□□ -0.65
LINC02560-201ENST00000596379 NPIPB6E9PJ23 425 aa10.99□□□□□ -0.65
LINC02560-201ENST00000596379 BTCP35070 178 aa10.99□□□□□ -0.65
LINC02560-201ENST00000596379 CAMLGP49069 296 aa10.99□□□□□ -0.65
LINC02560-201ENST00000596379 MIC13Q5XKP0 118 aa10.99□□□□□ -0.65
LINC02560-201ENST00000596379 Q6ZRG5 221 aa10.99□□□□□ -0.65
LINC02560-201ENST00000596379 Q6ZTI0 123 aa10.99□□□□□ -0.65
LINC02560-201ENST00000596379 ODF3Q96PU9 254 aa10.99□□□□□ -0.65
LINC02560-201ENST00000596379 PYGO2Q9BRQ0 406 aa10.99□□□□□ -0.65
LINC02560-201ENST00000596379 ZNF586Q9NXT0 402 aa10.99□□□□□ -0.65
LINC02560-201ENST00000596379 CENPXA8MT69 81 aa10.98□□□□□ -0.65
LINC02560-201ENST00000596379 L7N2F9 121 aa10.98□□□□□ -0.65
LINC02560-201ENST00000596379 BTF3P20290 206 aaKnown RBP10.98□□□□□ -0.65
LINC02560-201ENST00000596379 VAMP2P63027 116 aa10.98□□□□□ -0.65
LINC02560-201ENST00000596379 DAZ2Q13117 558 aaKnown RBP10.98□□□□□ -0.65
LINC02560-201ENST00000596379 RAB31Q13636 194 aa10.98□□□□□ -0.65
LINC02560-201ENST00000596379 GUK1Q16774 197 aa10.98□□□□□ -0.65
LINC02560-201ENST00000596379 NRARPQ7Z6K4 114 aa10.98□□□□□ -0.65
LINC02560-201ENST00000596379 VSIG2Q96IQ7 327 aa10.98□□□□□ -0.65
LINC02560-201ENST00000596379 SDHCQ99643 169 aaPredicted RBP10.98□□□□□ -0.65
LINC02560-201ENST00000596379 DNAH5Q8TE73 4624 aa10.97□□□□□ -0.65
LINC02560-201ENST00000596379 A0A096LPF7 62 aa10.97□□□□□ -0.65
LINC02560-201ENST00000596379 CCSO14618 274 aa10.97□□□□□ -0.65
LINC02560-201ENST00000596379 BCAP31P51572 246 aa10.97□□□□□ -0.65
LINC02560-201ENST00000596379 GSN-AS1Q9NRJ2 163 aa10.97□□□□□ -0.65
LINC02560-201ENST00000596379 LSM5Q9Y4Y9 91 aaKnown RBP10.97□□□□□ -0.65
LINC02560-201ENST00000596379 CST7O76096 145 aa10.96□□□□□ -0.65
LINC02560-201ENST00000596379 ERCC8Q13216 396 aa10.96□□□□□ -0.65
LINC02560-201ENST00000596379 ZNF846Q147U1 533 aa10.96□□□□□ -0.65
LINC02560-201ENST00000596379 OR1L4Q8NGR5 311 aa10.96□□□□□ -0.65
LINC02560-201ENST00000596379 RBM38Q9H0Z9 239 aaKnown RBP10.96□□□□□ -0.65
LINC02560-201ENST00000596379 TRGV2A0A075B6R0 118 aa10.95□□□□□ -0.66
LINC02560-201ENST00000596379 C7orf71A4D174 169 aa10.95□□□□□ -0.66
LINC02560-201ENST00000596379 FAM24AA6NFZ4 105 aa10.95□□□□□ -0.66
LINC02560-201ENST00000596379 FAM25EA8MYX2 175 aa10.95□□□□□ -0.66
LINC02560-201ENST00000596379 M0R3E3 92 aa10.95□□□□□ -0.66
LINC02560-201ENST00000596379 SLC25A5P05141 298 aaKnown RBP10.95□□□□□ -0.66
LINC02560-201ENST00000596379 CAV2P51636 162 aa10.95□□□□□ -0.66
LINC02560-201ENST00000596379 C11orf72Q8NBR9 251 aa10.95□□□□□ -0.66
LINC02560-201ENST00000596379 PFDN5Q99471 154 aa10.95□□□□□ -0.66
LINC02560-201ENST00000596379 UQCC1Q9NVA1 299 aa10.95□□□□□ -0.66
LINC02560-201ENST00000596379 WDR83OSQ9Y284 106 aa10.95□□□□□ -0.66
LINC02560-201ENST00000596379 TRBV19A0A075B6N1 114 aa10.94□□□□□ -0.66
LINC02560-201ENST00000596379 TRGV1A0A0A0MS02 117 aa10.94□□□□□ -0.66
LINC02560-201ENST00000596379 ZNF253O75346 499 aa10.94□□□□□ -0.66
LINC02560-201ENST00000596379 ZNF324O75467 553 aaPredicted RBP10.94□□□□□ -0.66
LINC02560-201ENST00000596379 LINC00315P59091 139 aa10.94□□□□□ -0.66
LINC02560-201ENST00000596379 CD300CQ08708 224 aa10.94□□□□□ -0.66
LINC02560-201ENST00000596379 CNPY1Q3B7I2 92 aa10.94□□□□□ -0.66
LINC02560-201ENST00000596379 C12orf45Q8N5I9 185 aaPredicted RBP10.94□□□□□ -0.66
LINC02560-201ENST00000596379 ZNF680Q8NEM1 530 aa10.94□□□□□ -0.66
LINC02560-201ENST00000596379 MRPL53Q96EL3 112 aaKnown RBP10.94□□□□□ -0.66
LINC02560-201ENST00000596379 C18orf15Q96N68 181 aa10.94□□□□□ -0.66
LINC02560-201ENST00000596379 C11orf1Q9H5F2 150 aa10.94□□□□□ -0.66
LINC02560-201ENST00000596379 SLC39A9Q9NUM3 307 aa10.94□□□□□ -0.66
LINC02560-201ENST00000596379 KLLNB2CW77 178 aa10.93□□□□□ -0.66
LINC02560-201ENST00000596379 IL7P13232 177 aa10.93□□□□□ -0.66
LINC02560-201ENST00000596379 RPL29P47914 159 aaKnown RBP10.93□□□□□ -0.66
LINC02560-201ENST00000596379 EIF4E3Q8N5X7 224 aaKnown RBP10.93□□□□□ -0.66
LINC02560-201ENST00000596379 FAM19A4Q96LR4 140 aa10.93□□□□□ -0.66
LINC02560-201ENST00000596379 LINC00477Q96M19 166 aa10.93□□□□□ -0.66
LINC02560-201ENST00000596379 AGPAT4-IT1Q9H0P7 198 aa10.93□□□□□ -0.66
LINC02560-201ENST00000596379 C20orf85Q9H1P6 137 aa10.93□□□□□ -0.66
LINC02560-201ENST00000596379 FUT9Q9Y231 359 aa10.93□□□□□ -0.66
LINC02560-201ENST00000596379 KLF12Q9Y4X4 402 aa10.93□□□□□ -0.66
LINC02560-201ENST00000596379 C5orf51A6NDU8 294 aa10.92□□□□□ -0.66
LINC02560-201ENST00000596379 SIVA1O15304 175 aa10.92□□□□□ -0.66
LINC02560-201ENST00000596379 NDUFB4O95168 129 aa10.92□□□□□ -0.66
LINC02560-201ENST00000596379 RNASE4P34096 147 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms