RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 EBLN2Q6P2I7 272 aa17.6■□□□□ 0.41
SRRM1-222ENST00000596378 ATOH7Q8N100 152 aa17.6■□□□□ 0.41
SRRM1-222ENST00000596378 C5orf56Q8N8D9 126 aa17.6■□□□□ 0.41
SRRM1-222ENST00000596378 ZFAND3Q9H8U3 227 aa17.6■□□□□ 0.41
SRRM1-222ENST00000596378 IGHV3OR16-13A0A075B7E8 117 aa17.6■□□□□ 0.41
SRRM1-222ENST00000596378 IGHV3-74A0A0B4J1X5 117 aa17.6■□□□□ 0.41
SRRM1-222ENST00000596378 A0A1B0GUT8 65 aa17.6■□□□□ 0.41
SRRM1-222ENST00000596378 CT45A10P0DMU9 189 aa17.6■□□□□ 0.41
SRRM1-222ENST00000596378 TMEM190Q8WZ59 177 aa17.6■□□□□ 0.41
SRRM1-222ENST00000596378 ZMAT5Q9UDW3 170 aaKnown RBP17.6■□□□□ 0.41
SRRM1-222ENST00000596378 VGLL1Q99990 258 aa17.59■□□□□ 0.41
SRRM1-222ENST00000596378 SPG11Q96JI7 2443 aa17.59■□□□□ 0.41
SRRM1-222ENST00000596378 ZNF138P52744 262 aa17.59■□□□□ 0.41
SRRM1-222ENST00000596378 LINC00469Q8N7U9 141 aa17.59■□□□□ 0.41
SRRM1-222ENST00000596378 CLEC5AQ9NY25 188 aa17.59■□□□□ 0.41
SRRM1-222ENST00000596378 TRAV40A0A0B4J280 105 aa17.58■□□□□ 0.41
SRRM1-222ENST00000596378 RELQ04864 619 aaPredicted RBP17.58■□□□□ 0.41
SRRM1-222ENST00000596378 SH2D1AO60880 128 aa17.58■□□□□ 0.4
SRRM1-222ENST00000596378 PAX8Q06710 450 aa17.58■□□□□ 0.4
SRRM1-222ENST00000596378 CCL19Q99731 98 aa17.58■□□□□ 0.4
SRRM1-222ENST00000596378 MIEN1Q9BRT3 115 aa17.58■□□□□ 0.4
SRRM1-222ENST00000596378 RNF224P0DH78 156 aa17.57■□□□□ 0.4
SRRM1-222ENST00000596378 CSMD2Q7Z408 3487 aa17.57■□□□□ 0.4
SRRM1-222ENST00000596378 IGHV3-49A0A0A0MS15 119 aa17.56■□□□□ 0.4
SRRM1-222ENST00000596378 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.56■□□□□ 0.4
SRRM1-222ENST00000596378 ZNF207O43670 478 aaKnown RBP17.56■□□□□ 0.4
SRRM1-222ENST00000596378 MAJINQ3KP22 176 aa17.56■□□□□ 0.4
SRRM1-222ENST00000596378 SPATA45Q537H7 98 aa17.56■□□□□ 0.4
SRRM1-222ENST00000596378 MUC21A0A0G2JKD1 596 aa17.56■□□□□ 0.4
SRRM1-222ENST00000596378 MUC21A0A140T8X8 626 aa17.56■□□□□ 0.4
SRRM1-222ENST00000596378 CLPSL1A2RUU4 121 aa17.56■□□□□ 0.4
SRRM1-222ENST00000596378 MUC21Q5SSG8 566 aa17.56■□□□□ 0.4
SRRM1-222ENST00000596378 PRR25Q96S07 402 aa17.56■□□□□ 0.4
SRRM1-222ENST00000596378 USP9XQ93008 2570 aaPredicted RBP17.56■□□□□ 0.4
SRRM1-222ENST00000596378 CTRLP40313 264 aa17.55■□□□□ 0.4
SRRM1-222ENST00000596378 ZNF80P51504 273 aaPredicted RBP17.55■□□□□ 0.4
SRRM1-222ENST00000596378 SPATA12Q7Z6I5 190 aa17.55■□□□□ 0.4
SRRM1-222ENST00000596378 RNF182Q8N6D2 247 aa17.55■□□□□ 0.4
SRRM1-222ENST00000596378 PIFOQ8TCI5 191 aa17.55■□□□□ 0.4
SRRM1-222ENST00000596378 PIMREGQ9BSJ6 248 aa17.55■□□□□ 0.4
SRRM1-222ENST00000596378 IGHV1-69DA0A0B4J2H0 117 aa17.55■□□□□ 0.4
SRRM1-222ENST00000596378 C2orf70A6NJV1 201 aa17.55■□□□□ 0.4
SRRM1-222ENST00000596378 BUB3O43684 328 aa17.55■□□□□ 0.4
SRRM1-222ENST00000596378 IGHV1-69P01742 117 aa17.55■□□□□ 0.4
SRRM1-222ENST00000596378 RIGQ13278 110 aa17.55■□□□□ 0.4
SRRM1-222ENST00000596378 LBHQ53QV2 105 aaPredicted RBP17.55■□□□□ 0.4
SRRM1-222ENST00000596378 NDFIP1Q9BT67 221 aa17.55■□□□□ 0.4
SRRM1-222ENST00000596378 IGHV1-24A0A0C4DH33 117 aa17.54■□□□□ 0.4
SRRM1-222ENST00000596378 SERTM2A0A1B0GWG4 89 aa17.54■□□□□ 0.4
SRRM1-222ENST00000596378 TMEM189A5PLL7 270 aa17.54■□□□□ 0.4
SRRM1-222ENST00000596378 CSN3P07498 182 aa17.54■□□□□ 0.4
SRRM1-222ENST00000596378 RAB4AP20338 218 aa17.54■□□□□ 0.4
SRRM1-222ENST00000596378 KLK9Q2XQG4 91 aa17.54■□□□□ 0.4
SRRM1-222ENST00000596378 LINC00173Q6ZV60 143 aa17.54■□□□□ 0.4
SRRM1-222ENST00000596378 KLK9Q9UKQ9 250 aa17.54■□□□□ 0.4
SRRM1-222ENST00000596378 PRAC2D3DTV9 90 aa17.54■□□□□ 0.4
SRRM1-222ENST00000596378 IGHV4-38-2P0DP08 117 aa17.54■□□□□ 0.4
SRRM1-222ENST00000596378 FAM162BQ5T6X4 162 aa17.54■□□□□ 0.4
SRRM1-222ENST00000596378 LYZL1Q6UWQ5 148 aa17.54■□□□□ 0.4
SRRM1-222ENST00000596378 M0R143 59 aa17.53■□□□□ 0.4
SRRM1-222ENST00000596378 GOSR1O95249 250 aa17.53■□□□□ 0.4
SRRM1-222ENST00000596378 ERCC8Q13216 396 aa17.53■□□□□ 0.4
SRRM1-222ENST00000596378 C10orf105Q8TEF2 133 aa17.53■□□□□ 0.4
SRRM1-222ENST00000596378 EEF1AKMT3Q96AZ1 226 aa17.53■□□□□ 0.4
SRRM1-222ENST00000596378 MOB4Q9Y3A3 225 aa17.53■□□□□ 0.4
SRRM1-222ENST00000596378 TMEM213A2RRL7 107 aa17.52■□□□□ 0.4
SRRM1-222ENST00000596378 LINC00614P0C842 121 aa17.52■□□□□ 0.4
SRRM1-222ENST00000596378 BTF3P20290 206 aaKnown RBP17.52■□□□□ 0.4
SRRM1-222ENST00000596378 IGHV4-30-2A0A087WSY4 118 aa17.52■□□□□ 0.39
SRRM1-222ENST00000596378 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.52■□□□□ 0.39
SRRM1-222ENST00000596378 LY6EQ16553 131 aa17.51■□□□□ 0.39
SRRM1-222ENST00000596378 SAPCD1Q5SSQ6 148 aa17.51■□□□□ 0.39
SRRM1-222ENST00000596378 DOPEY1Q5JWR5 2465 aa17.51■□□□□ 0.39
SRRM1-222ENST00000596378 TRAV41A0A0B4J266 112 aa17.5■□□□□ 0.39
SRRM1-222ENST00000596378 ATP5J2P56134 94 aa17.5■□□□□ 0.39
SRRM1-222ENST00000596378 CHCHD1Q96BP2 118 aaKnown RBP17.5■□□□□ 0.39
SRRM1-222ENST00000596378 Q6AWC8 147 aa17.49■□□□□ 0.39
SRRM1-222ENST00000596378 ATP5G2Q06055 141 aa17.49■□□□□ 0.39
SRRM1-222ENST00000596378 TRBV7-1A0A0A6YYK4 115 aa17.48■□□□□ 0.39
SRRM1-222ENST00000596378 COX8CQ7Z4L0 72 aa17.48■□□□□ 0.39
SRRM1-222ENST00000596378 GATD1Q8NB37 220 aa17.48■□□□□ 0.39
SRRM1-222ENST00000596378 TIMM8BQ9Y5J9 83 aaPredicted RBP17.48■□□□□ 0.39
SRRM1-222ENST00000596378 A0A087X0K7 114 aa17.48■□□□□ 0.39
SRRM1-222ENST00000596378 CLEC2AQ6UVW9 174 aa17.48■□□□□ 0.39
SRRM1-222ENST00000596378 ACACBO00763 2458 aa17.48■□□□□ 0.39
SRRM1-222ENST00000596378 S100A7P31151 101 aa17.47■□□□□ 0.39
SRRM1-222ENST00000596378 C19orf54Q5BKX5 351 aa17.47■□□□□ 0.39
SRRM1-222ENST00000596378 ARL6IP6Q8N6S5 226 aa17.47■□□□□ 0.39
SRRM1-222ENST00000596378 NRGNQ92686 78 aa17.47■□□□□ 0.39
SRRM1-222ENST00000596378 TMEM70Q9BUB7 260 aa17.47■□□□□ 0.39
SRRM1-222ENST00000596378 NUTF2P61970 127 aaKnown RBP17.47■□□□□ 0.39
SRRM1-222ENST00000596378 ZNF575Q86XF7 245 aa17.47■□□□□ 0.39
SRRM1-222ENST00000596378 LEPROTL1O95214 131 aa17.46■□□□□ 0.39
SRRM1-222ENST00000596378 TRGV3P03979 118 aa17.46■□□□□ 0.39
SRRM1-222ENST00000596378 IGLC3P0DOY3 106 aa17.46■□□□□ 0.39
SRRM1-222ENST00000596378 AMN1Q8IY45 258 aa17.46■□□□□ 0.39
SRRM1-222ENST00000596378 METTL26Q96S19 204 aa17.46■□□□□ 0.39
SRRM1-222ENST00000596378 MYO18BQ8IUG5 2567 aa17.46■□□□□ 0.39
SRRM1-222ENST00000596378 A0A1B0GW15 77 aa17.46■□□□□ 0.38
SRRM1-222ENST00000596378 IL17RELQ6ZVW7 336 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms