RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 PCLOQ9Y6V0 5065 aa11.95□□□□□ -0.5
CCDC9-202ENST00000595659 UBE2L5PA0A1B0GUS4 154 aa11.94□□□□□ -0.5
CCDC9-202ENST00000595659 H2AFB2P0C5Z0 115 aa11.94□□□□□ -0.5
CCDC9-202ENST00000595659 GFI1BQ5VTD9 330 aa11.94□□□□□ -0.5
CCDC9-202ENST00000595659 SAT2Q96F10 170 aaPredicted RBP11.94□□□□□ -0.5
CCDC9-202ENST00000595659 WDR83OSQ9Y284 106 aa11.94□□□□□ -0.5
CCDC9-202ENST00000595659 IGSF23A1L1A6 192 aa11.93□□□□□ -0.5
CCDC9-202ENST00000595659 H7BYZ3 331 aa11.93□□□□□ -0.5
CCDC9-202ENST00000595659 CT45A10P0DMU9 189 aa11.93□□□□□ -0.5
CCDC9-202ENST00000595659 SOHLH1Q5JUK2 328 aa11.93□□□□□ -0.5
CCDC9-202ENST00000595659 RNASE8Q8TDE3 154 aaKnown RBP11.93□□□□□ -0.5
CCDC9-202ENST00000595659 PXMP4Q9Y6I8 212 aa11.93□□□□□ -0.5
CCDC9-202ENST00000595659 PVALBP20472 110 aaPredicted RBP11.92□□□□□ -0.5
CCDC9-202ENST00000595659 BAXQ07812 192 aa11.92□□□□□ -0.5
CCDC9-202ENST00000595659 RAB32Q13637 225 aa11.92□□□□□ -0.5
CCDC9-202ENST00000595659 ZNF493Q6ZR52 646 aa11.92□□□□□ -0.5
CCDC9-202ENST00000595659 ZNF575Q86XF7 245 aa11.92□□□□□ -0.5
CCDC9-202ENST00000595659 OR1L4Q8NGR5 311 aa11.92□□□□□ -0.5
CCDC9-202ENST00000595659 TMEM263Q8WUH6 116 aaKnown RBP11.92□□□□□ -0.5
CCDC9-202ENST00000595659 RNF141Q8WVD5 230 aa11.92□□□□□ -0.5
CCDC9-202ENST00000595659 ZNF586Q9NXT0 402 aa11.92□□□□□ -0.5
CCDC9-202ENST00000595659 TRAV12-3A0A0B4J271 114 aa11.91□□□□□ -0.5
CCDC9-202ENST00000595659 MED14OSP0DP75 135 aa11.91□□□□□ -0.5
CCDC9-202ENST00000595659 SULT1A1P50225 295 aa11.91□□□□□ -0.5
CCDC9-202ENST00000595659 OR5I1Q13606 314 aa11.91□□□□□ -0.5
CCDC9-202ENST00000595659 CCDC28AQ8IWP9 274 aa11.91□□□□□ -0.5
CCDC9-202ENST00000595659 TMEM252Q8N6L7 170 aa11.91□□□□□ -0.5
CCDC9-202ENST00000595659 ZNRF2Q8NHG8 242 aa11.91□□□□□ -0.5
CCDC9-202ENST00000595659 LYRM2Q9NU23 88 aaPredicted RBP11.91□□□□□ -0.5
CCDC9-202ENST00000595659 SLC39A9Q9NUM3 307 aa11.91□□□□□ -0.5
CCDC9-202ENST00000595659 FAM240BA0A1B0GVZ2 78 aa11.9□□□□□ -0.5
CCDC9-202ENST00000595659 GAGE12BA1L429 117 aa11.9□□□□□ -0.5
CCDC9-202ENST00000595659 M0R3E3 92 aa11.9□□□□□ -0.5
CCDC9-202ENST00000595659 GAGE7O76087 117 aa11.9□□□□□ -0.5
CCDC9-202ENST00000595659 GAGE12FP0CL80 117 aa11.9□□□□□ -0.5
CCDC9-202ENST00000595659 GAGE12GP0CL81 117 aa11.9□□□□□ -0.5
CCDC9-202ENST00000595659 GAGE12IP0CL82 117 aa11.9□□□□□ -0.5
CCDC9-202ENST00000595659 FGF7P21781 194 aa11.9□□□□□ -0.5
CCDC9-202ENST00000595659 S100A11P31949 105 aa11.9□□□□□ -0.5
CCDC9-202ENST00000595659 FAM3BP58499 235 aaPredicted RBP11.9□□□□□ -0.5
CCDC9-202ENST00000595659 ERCC8Q13216 396 aa11.9□□□□□ -0.5
CCDC9-202ENST00000595659 VWC2Q2TAL6 325 aa11.9□□□□□ -0.5
CCDC9-202ENST00000595659 PFDN5Q99471 154 aa11.9□□□□□ -0.5
CCDC9-202ENST00000595659 LINC00588Q9Y4M8 146 aa11.9□□□□□ -0.5
CCDC9-202ENST00000595659 A0A0J9YY99 117 aa11.89□□□□□ -0.51
CCDC9-202ENST00000595659 RPL29P47914 159 aaKnown RBP11.89□□□□□ -0.51
CCDC9-202ENST00000595659 CCL18P55774 89 aa11.89□□□□□ -0.51
CCDC9-202ENST00000595659 IL15RAQ13261 267 aa11.89□□□□□ -0.51
CCDC9-202ENST00000595659 CLINT1Q14677 625 aa11.89□□□□□ -0.51
CCDC9-202ENST00000595659 GUK1Q16774 197 aa11.89□□□□□ -0.51
CCDC9-202ENST00000595659 GCSAMLQ5JQS6 135 aa11.89□□□□□ -0.51
CCDC9-202ENST00000595659 STX12Q86Y82 276 aa11.89□□□□□ -0.51
CCDC9-202ENST00000595659 C20orf144Q9BQM9 153 aa11.89□□□□□ -0.51
CCDC9-202ENST00000595659 CCDC32Q9BV29 185 aa11.89□□□□□ -0.51
CCDC9-202ENST00000595659 GPN1Q9HCN4 374 aaPredicted RBP11.89□□□□□ -0.51
CCDC9-202ENST00000595659 NDUFA13Q9P0J0 144 aa11.89□□□□□ -0.51
CCDC9-202ENST00000595659 TRBV19A0A075B6N1 114 aa11.88□□□□□ -0.51
CCDC9-202ENST00000595659 TRAV26-1A0A087WT03 109 aa11.88□□□□□ -0.51
CCDC9-202ENST00000595659 NBDYA0A0U1RRE5 68 aa11.88□□□□□ -0.51
CCDC9-202ENST00000595659 NPIPB6E9PJ23 425 aa11.88□□□□□ -0.51
CCDC9-202ENST00000595659 PYYP10082 97 aa11.88□□□□□ -0.51
CCDC9-202ENST00000595659 LEPP41159 167 aa11.88□□□□□ -0.51
CCDC9-202ENST00000595659 TNP2Q05952 138 aa11.88□□□□□ -0.51
CCDC9-202ENST00000595659 BLNKQ8WV28 456 aa11.88□□□□□ -0.51
CCDC9-202ENST00000595659 SNURFLB1AK76 121 aa11.87□□□□□ -0.51
CCDC9-202ENST00000595659 SIX6O95475 246 aa11.87□□□□□ -0.51
CCDC9-202ENST00000595659 HOXA5P20719 270 aa11.87□□□□□ -0.51
CCDC9-202ENST00000595659 HBG1P69891 147 aa11.87□□□□□ -0.51
CCDC9-202ENST00000595659 HBG2P69892 147 aa11.87□□□□□ -0.51
CCDC9-202ENST00000595659 SSX7Q7RTT5 188 aa11.87□□□□□ -0.51
CCDC9-202ENST00000595659 GNPNAT1Q96EK6 184 aaPredicted RBP11.87□□□□□ -0.51
CCDC9-202ENST00000595659 TIMM9Q9Y5J7 89 aa11.87□□□□□ -0.51
CCDC9-202ENST00000595659 NDUFB4O95168 129 aa11.86□□□□□ -0.51
CCDC9-202ENST00000595659 RLN2P04090 185 aa11.86□□□□□ -0.51
CCDC9-202ENST00000595659 NHLH2Q02577 135 aa11.86□□□□□ -0.51
CCDC9-202ENST00000595659 MZT2BQ6NZ67 158 aa11.86□□□□□ -0.51
CCDC9-202ENST00000595659 EXOC3-AS1Q8N2X6 119 aa11.86□□□□□ -0.51
CCDC9-202ENST00000595659 LINC00612Q8N6U2 182 aa11.86□□□□□ -0.51
CCDC9-202ENST00000595659 THAP6Q8TBB0 222 aa11.86□□□□□ -0.51
CCDC9-202ENST00000595659 ODF3Q96PU9 254 aa11.86□□□□□ -0.51
CCDC9-202ENST00000595659 M6PRP20645 277 aa11.85□□□□□ -0.51
CCDC9-202ENST00000595659 CD300CQ08708 224 aa11.85□□□□□ -0.51
CCDC9-202ENST00000595659 ATP6V1FQ16864 119 aa11.85□□□□□ -0.51
CCDC9-202ENST00000595659 Q6ZTI0 123 aa11.85□□□□□ -0.51
CCDC9-202ENST00000595659 C6orf223Q8N319 242 aa11.85□□□□□ -0.51
CCDC9-202ENST00000595659 NPCDR1Q9BY65 106 aa11.85□□□□□ -0.51
CCDC9-202ENST00000595659 AGPAT4-IT1Q9H0P7 198 aa11.85□□□□□ -0.51
CCDC9-202ENST00000595659 TMPRSS5Q9H3S3 457 aa11.85□□□□□ -0.51
CCDC9-202ENST00000595659 ZNF253O75346 499 aa11.84□□□□□ -0.51
CCDC9-202ENST00000595659 HIST1H1EP10412 219 aaKnown RBP11.84□□□□□ -0.51
CCDC9-202ENST00000595659 RNASE4P34096 147 aaKnown RBP11.84□□□□□ -0.51
CCDC9-202ENST00000595659 BTN1A1Q13410 526 aa11.84□□□□□ -0.51
CCDC9-202ENST00000595659 LRRC37A5PQ49AS3 106 aa11.84□□□□□ -0.51
CCDC9-202ENST00000595659 RXFP4Q8TDU9 374 aa11.84□□□□□ -0.51
CCDC9-202ENST00000595659 CHAC2Q8WUX2 184 aa11.84□□□□□ -0.51
CCDC9-202ENST00000595659 PYGO2Q9BRQ0 406 aa11.84□□□□□ -0.51
CCDC9-202ENST00000595659 Q9H8V8 135 aa11.84□□□□□ -0.51
CCDC9-202ENST00000595659 GSN-AS1Q9NRJ2 163 aa11.84□□□□□ -0.51
CCDC9-202ENST00000595659 TMEM14CQ9P0S9 112 aa11.84□□□□□ -0.51
CCDC9-202ENST00000595659 NACAE9PAV3 2078 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms