RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 JMJD8Q96S16 334 aa10.17□□□□□ -0.78
VRK3-205ENST00000593919 ZFAND3Q9H8U3 227 aa10.17□□□□□ -0.78
VRK3-205ENST00000593919 OSTCQ9NRP0 149 aa10.17□□□□□ -0.78
VRK3-205ENST00000593919 TRAV9-1A0A075B6T8 112 aa10.17□□□□□ -0.78
VRK3-205ENST00000593919 H3BRN7 92 aa10.17□□□□□ -0.78
VRK3-205ENST00000593919 RELQ04864 619 aaPredicted RBP10.17□□□□□ -0.78
VRK3-205ENST00000593919 IBA57Q5T440 356 aaKnown RBP10.17□□□□□ -0.78
VRK3-205ENST00000593919 RNF152Q8N8N0 203 aa10.17□□□□□ -0.78
VRK3-205ENST00000593919 PACRGQ96M98 296 aaPredicted RBP10.17□□□□□ -0.78
VRK3-205ENST00000593919 JMJD1CQ15652 2540 aa10.17□□□□□ -0.78
VRK3-205ENST00000593919 MAST4O15021 2626 aa10.17□□□□□ -0.78
VRK3-205ENST00000593919 BMPR1BO00238 502 aa10.16□□□□□ -0.78
VRK3-205ENST00000593919 ISLRO14498 428 aa10.16□□□□□ -0.78
VRK3-205ENST00000593919 CRLF1O75462 422 aa10.16□□□□□ -0.78
VRK3-205ENST00000593919 CBLN1P23435 193 aa10.16□□□□□ -0.78
VRK3-205ENST00000593919 MYCNOSP40205 109 aa10.16□□□□□ -0.78
VRK3-205ENST00000593919 TCL1AP56279 114 aa10.16□□□□□ -0.78
VRK3-205ENST00000593919 SSTP61278 116 aa10.16□□□□□ -0.78
VRK3-205ENST00000593919 CDPF1Q6NVV7 123 aa10.16□□□□□ -0.78
VRK3-205ENST00000593919 SGK494Q96LW2 274 aa10.16□□□□□ -0.78
VRK3-205ENST00000593919 SHANK2-AS3Q9BTD1 123 aa10.16□□□□□ -0.78
VRK3-205ENST00000593919 EPDR1Q9UM22 224 aa10.16□□□□□ -0.78
VRK3-205ENST00000593919 SPINK4O60575 86 aa10.15□□□□□ -0.78
VRK3-205ENST00000593919 UBE2G1P62253 170 aa10.15□□□□□ -0.78
VRK3-205ENST00000593919 COA6Q5JTJ3 125 aaKnown RBP10.15□□□□□ -0.78
VRK3-205ENST00000593919 WDR73Q6P4I2 378 aa10.15□□□□□ -0.78
VRK3-205ENST00000593919 BAGE2Q86Y30 109 aa10.15□□□□□ -0.78
VRK3-205ENST00000593919 RABAC1Q9UI14 185 aa10.15□□□□□ -0.78
VRK3-205ENST00000593919 ZNF705GA8MUZ8 300 aaPredicted RBP10.15□□□□□ -0.78
VRK3-205ENST00000593919 AMBPP02760 352 aa10.15□□□□□ -0.78
VRK3-205ENST00000593919 FRMD6-AS1P0C7T7 363 aa10.15□□□□□ -0.78
VRK3-205ENST00000593919 Q9H3A6 140 aa10.15□□□□□ -0.78
VRK3-205ENST00000593919 PEF1Q9UBV8 284 aaKnown RBP10.15□□□□□ -0.78
VRK3-205ENST00000593919 CLPSL1A2RUU4 121 aa10.14□□□□□ -0.79
VRK3-205ENST00000593919 TCF21O43680 179 aa10.14□□□□□ -0.79
VRK3-205ENST00000593919 PRR27Q6MZM9 219 aa10.14□□□□□ -0.79
VRK3-205ENST00000593919 UBE2E2Q96LR5 201 aa10.14□□□□□ -0.79
VRK3-205ENST00000593919 MRPL18Q9H0U6 180 aaKnown RBP10.14□□□□□ -0.79
VRK3-205ENST00000593919 C16orf95Q9H693 158 aa10.14□□□□□ -0.79
VRK3-205ENST00000593919 A0A1B0GUS0 222 aa10.14□□□□□ -0.79
VRK3-205ENST00000593919 CA1P00915 261 aaPredicted RBP10.14□□□□□ -0.79
VRK3-205ENST00000593919 LINC01559Q495D7 138 aa10.14□□□□□ -0.79
VRK3-205ENST00000593919 TCTEX1D4Q5JR98 221 aa10.14□□□□□ -0.79
VRK3-205ENST00000593919 UNQ9165/PRO28630Q6UXU0 137 aa10.14□□□□□ -0.79
VRK3-205ENST00000593919 S100A7AQ86SG5 101 aa10.14□□□□□ -0.79
VRK3-205ENST00000593919 LINC01006Q8NI28 216 aa10.14□□□□□ -0.79
VRK3-205ENST00000593919 WIPF2Q8TF74 440 aaPredicted RBP10.14□□□□□ -0.79
VRK3-205ENST00000593919 SNURFLB1AK76 121 aa10.13□□□□□ -0.79
VRK3-205ENST00000593919 NDUFA4O00483 81 aa10.13□□□□□ -0.79
VRK3-205ENST00000593919 SRSF2Q01130 221 aaKnown RBP10.13□□□□□ -0.79
VRK3-205ENST00000593919 TMEM183BQ1AE95 376 aa10.13□□□□□ -0.79
VRK3-205ENST00000593919 ATG101Q9BSB4 218 aa10.13□□□□□ -0.79
VRK3-205ENST00000593919 ZNF586Q9NXT0 402 aa10.13□□□□□ -0.79
VRK3-205ENST00000593919 WNK1Q9H4A3 2382 aa10.13□□□□□ -0.79
VRK3-205ENST00000593919 GRIFINA4D1Z8 144 aa10.12□□□□□ -0.79
VRK3-205ENST00000593919 ZNF207O43670 478 aaKnown RBP10.12□□□□□ -0.79
VRK3-205ENST00000593919 LGALS1P09382 135 aaKnown RBP10.12□□□□□ -0.79
VRK3-205ENST00000593919 BPIFA4PQ86YQ2 179 aa10.12□□□□□ -0.79
VRK3-205ENST00000593919 C5orf17Q8NAS9 161 aa10.12□□□□□ -0.79
VRK3-205ENST00000593919 TMEM14CQ9P0S9 112 aa10.12□□□□□ -0.79
VRK3-205ENST00000593919 SMIM27A0A1W2PRY6 76 aa10.12□□□□□ -0.79
VRK3-205ENST00000593919 HIST1H1EP10412 219 aaKnown RBP10.12□□□□□ -0.79
VRK3-205ENST00000593919 MRPL54Q6P161 138 aaKnown RBP10.12□□□□□ -0.79
VRK3-205ENST00000593919 C18orf65Q6ZTR6 163 aa10.12□□□□□ -0.79
VRK3-205ENST00000593919 METTL26Q96S19 204 aa10.12□□□□□ -0.79
VRK3-205ENST00000593919 MRPS12O15235 138 aaKnown RBP10.11□□□□□ -0.79
VRK3-205ENST00000593919 NDUFA7O95182 113 aa10.11□□□□□ -0.79
VRK3-205ENST00000593919 RPL19P84098 196 aaKnown RBP10.11□□□□□ -0.79
VRK3-205ENST00000593919 MAJINQ3KP22 176 aa10.11□□□□□ -0.79
VRK3-205ENST00000593919 KHDC1LQ5JSQ8 128 aa10.11□□□□□ -0.79
VRK3-205ENST00000593919 HIST2H2BDQ6DRA6 164 aa10.11□□□□□ -0.79
VRK3-205ENST00000593919 TMEM256Q8N2U0 113 aa10.11□□□□□ -0.79
VRK3-205ENST00000593919 EXOC3-AS1Q8N2X6 119 aa10.11□□□□□ -0.79
VRK3-205ENST00000593919 NUDT10Q8NFP7 164 aa10.11□□□□□ -0.79
VRK3-205ENST00000593919 NUDT11Q96G61 164 aa10.11□□□□□ -0.79
VRK3-205ENST00000593919 OTORQ9NRC9 128 aa10.11□□□□□ -0.79
VRK3-205ENST00000593919 IGHV3OR16-13A0A075B7E8 117 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 IGHV3-74A0A0B4J1X5 117 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 BUB3O43684 328 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 APOHP02749 345 aaPredicted RBP10.1□□□□□ -0.79
VRK3-205ENST00000593919 TCRAP04437 139 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 RAB4BP61018 213 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 FAM231DQ6ZW35 169 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 GBGT1Q8N5D6 347 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 TMEM190Q8WZ59 177 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 FMC1Q96HJ9 113 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 GNB1LQ9BYB4 327 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 KLF12Q9Y4X4 402 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 IGHV4OR15-8A0A075B7B6 117 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 A0A087WW49 117 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 IGHV3-49A0A0A0MS15 119 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 IGHV3-66A0A0C4DH42 116 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 IGLC2P0DOY2 106 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 S100A7P31151 101 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 DEFA6Q01524 100 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 OR4F17Q8NGA8 305 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 CMTM2Q8TAZ6 248 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 TMEM18Q96B42 140 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 GRAMD2BQ96HH9 432 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 C17orf77Q96MU5 243 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms