RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 LINC00854A0A1B0GVQ3 168 aa15.74■□□□□ 0.11
SSBP4-203ENST00000593641 PRAC2D3DTV9 90 aa15.74■□□□□ 0.11
SSBP4-203ENST00000593641 J3KRW8 73 aa15.74■□□□□ 0.11
SSBP4-203ENST00000593641 ZNF701M0R085 212 aaPredicted RBP15.74■□□□□ 0.11
SSBP4-203ENST00000593641 ARL16Q0P5N6 197 aa15.74■□□□□ 0.11
SSBP4-203ENST00000593641 OPCMLQ14982 345 aa15.74■□□□□ 0.11
SSBP4-203ENST00000593641 BAK1Q16611 211 aa15.74■□□□□ 0.11
SSBP4-203ENST00000593641 SPATA12Q7Z6I5 190 aa15.74■□□□□ 0.11
SSBP4-203ENST00000593641 TMEM37Q8WXS4 190 aa15.74■□□□□ 0.11
SSBP4-203ENST00000593641 MGST2Q99735 147 aa15.74■□□□□ 0.11
SSBP4-203ENST00000593641 C7orf66A4D0T2 115 aa15.73■□□□□ 0.11
SSBP4-203ENST00000593641 L7N2F9 121 aa15.73■□□□□ 0.11
SSBP4-203ENST00000593641 IGLC2P0DOY2 106 aa15.73■□□□□ 0.11
SSBP4-203ENST00000593641 LEPP41159 167 aa15.73■□□□□ 0.11
SSBP4-203ENST00000593641 VAMP2P63027 116 aa15.73■□□□□ 0.11
SSBP4-203ENST00000593641 RAB31Q13636 194 aa15.73■□□□□ 0.11
SSBP4-203ENST00000593641 Q6ZRG5 221 aa15.73■□□□□ 0.11
SSBP4-203ENST00000593641 MITD1Q8WV92 249 aa15.73■□□□□ 0.11
SSBP4-203ENST00000593641 Q9H3A6 140 aa15.73■□□□□ 0.11
SSBP4-203ENST00000593641 MBPP02686 304 aaPredicted RBP15.72■□□□□ 0.11
SSBP4-203ENST00000593641 MORN5Q5VZ52 161 aa15.72■□□□□ 0.11
SSBP4-203ENST00000593641 ODF3Q96PU9 254 aa15.72■□□□□ 0.11
SSBP4-203ENST00000593641 UPK3BQ9BT76 320 aa15.72■□□□□ 0.11
SSBP4-203ENST00000593641 H3BNG1 76 aa15.71■□□□□ 0.11
SSBP4-203ENST00000593641 HOXA5P20719 270 aa15.71■□□□□ 0.11
SSBP4-203ENST00000593641 CAMLGP49069 296 aa15.71■□□□□ 0.11
SSBP4-203ENST00000593641 ZNF846Q147U1 533 aa15.71■□□□□ 0.11
SSBP4-203ENST00000593641 GUK1Q16774 197 aa15.71■□□□□ 0.11
SSBP4-203ENST00000593641 PYGO2Q9BRQ0 406 aa15.71■□□□□ 0.11
SSBP4-203ENST00000593641 KRTAP1-5Q9BYS1 174 aa15.71■□□□□ 0.11
SSBP4-203ENST00000593641 DNAJC4Q9NNZ3 241 aa15.71■□□□□ 0.11
SSBP4-203ENST00000593641 TRAV12-3A0A0B4J271 114 aa15.7■□□□□ 0.1
SSBP4-203ENST00000593641 A0A1W2PPQ1 181 aa15.7■□□□□ 0.1
SSBP4-203ENST00000593641 H3BQ15 152 aa15.7■□□□□ 0.1
SSBP4-203ENST00000593641 BTCP35070 178 aa15.7■□□□□ 0.1
SSBP4-203ENST00000593641 BCAP31P51572 246 aa15.7■□□□□ 0.1
SSBP4-203ENST00000593641 CNPY1Q3B7I2 92 aa15.7■□□□□ 0.1
SSBP4-203ENST00000593641 OR1L4Q8NGR5 311 aa15.7■□□□□ 0.1
SSBP4-203ENST00000593641 SAT2Q96F10 170 aaPredicted RBP15.7■□□□□ 0.1
SSBP4-203ENST00000593641 CT45A10P0DMU9 189 aa15.69■□□□□ 0.1
SSBP4-203ENST00000593641 ESRGQ1W209 222 aa15.69■□□□□ 0.1
SSBP4-203ENST00000593641 NRARPQ7Z6K4 114 aa15.69■□□□□ 0.1
SSBP4-203ENST00000593641 PFDN5Q99471 154 aa15.69■□□□□ 0.1
SSBP4-203ENST00000593641 TMPRSS5Q9H3S3 457 aa15.69■□□□□ 0.1
SSBP4-203ENST00000593641 MRPS16Q9Y3D3 137 aaKnown RBP15.69■□□□□ 0.1
SSBP4-203ENST00000593641 NPIPB6E9PJ23 425 aa15.68■□□□□ 0.1
SSBP4-203ENST00000593641 CAV2P51636 162 aa15.68■□□□□ 0.1
SSBP4-203ENST00000593641 DAZ2Q13117 558 aaKnown RBP15.68■□□□□ 0.1
SSBP4-203ENST00000593641 ZNF431Q8TF32 576 aaPredicted RBP15.68■□□□□ 0.1
SSBP4-203ENST00000593641 LSM5Q9Y4Y9 91 aaKnown RBP15.68■□□□□ 0.1
SSBP4-203ENST00000593641 CCSO14618 274 aa15.67■□□□□ 0.1
SSBP4-203ENST00000593641 BTF3P20290 206 aaKnown RBP15.67■□□□□ 0.1
SSBP4-203ENST00000593641 MIC13Q5XKP0 118 aa15.67■□□□□ 0.1
SSBP4-203ENST00000593641 Q6ZTI0 123 aa15.67■□□□□ 0.1
SSBP4-203ENST00000593641 ZNF680Q8NEM1 530 aa15.67■□□□□ 0.1
SSBP4-203ENST00000593641 RBM38Q9H0Z9 239 aaKnown RBP15.67■□□□□ 0.1
SSBP4-203ENST00000593641 UQCC1Q9NVA1 299 aa15.67■□□□□ 0.1
SSBP4-203ENST00000593641 TRGV2A0A075B6R0 118 aa15.66■□□□□ 0.1
SSBP4-203ENST00000593641 TRAV5A0A0B4J249 113 aa15.66■□□□□ 0.1
SSBP4-203ENST00000593641 FAM25EA8MYX2 175 aa15.66■□□□□ 0.1
SSBP4-203ENST00000593641 ZNF253O75346 499 aa15.66■□□□□ 0.1
SSBP4-203ENST00000593641 CST7O76096 145 aa15.66■□□□□ 0.1
SSBP4-203ENST00000593641 Q8N1X5 172 aa15.66■□□□□ 0.1
SSBP4-203ENST00000593641 C20orf85Q9H1P6 137 aa15.66■□□□□ 0.1
SSBP4-203ENST00000593641 SLC25A5P05141 298 aaKnown RBP15.65■□□□□ 0.1
SSBP4-203ENST00000593641 C12orf45Q8N5I9 185 aaPredicted RBP15.65■□□□□ 0.1
SSBP4-203ENST00000593641 MRPL53Q96EL3 112 aaKnown RBP15.65■□□□□ 0.1
SSBP4-203ENST00000593641 SDHCQ99643 169 aaPredicted RBP15.65■□□□□ 0.1
SSBP4-203ENST00000593641 ZNF586Q9NXT0 402 aa15.65■□□□□ 0.1
SSBP4-203ENST00000593641 C7orf71A4D174 169 aa15.64■□□□□ 0.09
SSBP4-203ENST00000593641 GSN-AS1Q9NRJ2 163 aa15.64■□□□□ 0.09
SSBP4-203ENST00000593641 WDR83OSQ9Y284 106 aa15.64■□□□□ 0.09
SSBP4-203ENST00000593641 C5orf51A6NDU8 294 aa15.63■□□□□ 0.09
SSBP4-203ENST00000593641 IL7P13232 177 aa15.63■□□□□ 0.09
SSBP4-203ENST00000593641 PVALBP20472 110 aaPredicted RBP15.63■□□□□ 0.09
SSBP4-203ENST00000593641 BAXQ07812 192 aa15.63■□□□□ 0.09
SSBP4-203ENST00000593641 SCRT2Q9NQ03 307 aa15.63■□□□□ 0.09
SSBP4-203ENST00000593641 SLC39A9Q9NUM3 307 aa15.63■□□□□ 0.09
SSBP4-203ENST00000593641 A0A096LPF7 62 aa15.62■□□□□ 0.09
SSBP4-203ENST00000593641 TRGV1A0A0A0MS02 117 aa15.62■□□□□ 0.09
SSBP4-203ENST00000593641 UBE2L5PA0A1B0GUS4 154 aa15.62■□□□□ 0.09
SSBP4-203ENST00000593641 FAM24AA6NFZ4 105 aa15.62■□□□□ 0.09
SSBP4-203ENST00000593641 M0R3E3 92 aa15.62■□□□□ 0.09
SSBP4-203ENST00000593641 RPL29P47914 159 aaKnown RBP15.62■□□□□ 0.09
SSBP4-203ENST00000593641 KRTAP10-2P60368 255 aa15.62■□□□□ 0.09
SSBP4-203ENST00000593641 C18orf15Q96N68 181 aa15.62■□□□□ 0.09
SSBP4-203ENST00000593641 TRBV19A0A075B6N1 114 aa15.61■□□□□ 0.09
SSBP4-203ENST00000593641 C11orf72Q8NBR9 251 aa15.61■□□□□ 0.09
SSBP4-203ENST00000593641 VSIG2Q96IQ7 327 aa15.61■□□□□ 0.09
SSBP4-203ENST00000593641 FUT9Q9Y231 359 aa15.61■□□□□ 0.09
SSBP4-203ENST00000593641 PRELID1Q9Y255 219 aa15.61■□□□□ 0.09
SSBP4-203ENST00000593641 TIMM9Q9Y5J7 89 aa15.61■□□□□ 0.09
SSBP4-203ENST00000593641 S100A11P31949 105 aa15.6■□□□□ 0.09
SSBP4-203ENST00000593641 LINC00315P59091 139 aa15.6■□□□□ 0.09
SSBP4-203ENST00000593641 S100A10P60903 97 aa15.6■□□□□ 0.09
SSBP4-203ENST00000593641 HBG1P69891 147 aa15.6■□□□□ 0.09
SSBP4-203ENST00000593641 HBG2P69892 147 aa15.6■□□□□ 0.09
SSBP4-203ENST00000593641 ERCC8Q13216 396 aa15.6■□□□□ 0.09
SSBP4-203ENST00000593641 VWC2Q2TAL6 325 aa15.6■□□□□ 0.09
SSBP4-203ENST00000593641 STX12Q86Y82 276 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms