RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 DAZAP2Q15038 168 aaPredicted RBP2.84□□□□□ -1.96
VMP1-216ENST00000592790 FAM201AQ5SY85 155 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 MINOS1Q5TGZ0 78 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 DEFB124Q8NES8 71 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 RNASE6Q93091 150 aaKnown RBP2.84□□□□□ -1.96
VMP1-216ENST00000592790 C16orf92Q96LL3 132 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 FAM110AQ9BQ89 295 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 CHAC1Q9BUX1 264 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 PRSS22Q9GZN4 317 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 TP53TG3Q9ULZ0 132 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 MINOS1-NBL1R4GNA1 71 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 HLA-DRB4X5D2U9 266 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 FRYLO94915 3013 aa2.84□□□□□ -1.96
VMP1-216ENST00000592790 LAMA1P25391 3075 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 LOC105371242A0A075B767 164 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 C19orf71A6NCJ1 209 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 BUB1B-PAK6H3BSN5 160 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 TAX1BP3O14907 124 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 CEACAM4O75871 244 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 IGHV3-48P01763 117 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 ARMS2P0C7Q2 107 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 CGB3P0DN86 165 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 CGB7P0DN87 165 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 GP9P14770 177 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 LGALS3P17931 250 aaKnown RBP2.83□□□□□ -1.96
VMP1-216ENST00000592790 IFI27P40305 119 aaPredicted RBP2.83□□□□□ -1.96
VMP1-216ENST00000592790 BSPH1Q075Z2 132 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 DEFB123Q8N688 67 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 Q8N8P6 123 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 ZFHX2Q9C0A1 2572 aaPredicted RBP2.83□□□□□ -1.96
VMP1-216ENST00000592790 CEP192Q8TEP8 1941 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 TRAV8-6A0A0B4J262 113 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 LOC107984156A0A0G2JMH3 177 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 OVOL1O14753 267 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 KLK10O43240 276 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 IGFL2Q6UWQ7 119 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 IGFL3Q6UXB1 125 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 ZNF493Q6ZR52 646 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 ARL17AQ8IVW1 177 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 EXOC3-AS1Q8N2X6 119 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 IGFBPL1Q8WX77 278 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 DLX4Q92988 240 aaPredicted RBP2.83□□□□□ -1.96
VMP1-216ENST00000592790 C18orf15Q96N68 181 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 CITED1Q99966 193 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 SPRY4Q9C004 299 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 HILPDAQ9Y5L2 63 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 KIAA1549Q9HCM3 1950 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 KIAA2026Q5HYC2 2103 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 TRBV20-1A0A075B6N2 111 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 TRAV21A0A0B4J279 112 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 RBAKDNA6NC62 111 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 NPIPB5A8MRT5 1133 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 F5H697 171 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 M0R3E3 92 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 SNAI2O43623 268 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 MGPP08493 103 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 IGLC1P0CG04 106 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 APELAP0DMC3 54 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 MYOD1P15172 320 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 SLC25A16P16260 332 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 ATP5G2Q06055 141 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 FAM53AQ6NSI3 398 aaPredicted RBP2.83□□□□□ -1.96
VMP1-216ENST00000592790 OR11H6Q8NGC7 330 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 ZNF502Q8TBZ5 544 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 GLMPQ8WWB7 406 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 MRPL53Q96EL3 112 aaKnown RBP2.83□□□□□ -1.96
VMP1-216ENST00000592790 SIGLEC8Q9NYZ4 499 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 DKK4Q9UBT3 224 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 PCDH15Q96QU1 1955 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 VPS13AQ96RL7 3174 aa2.83□□□□□ -1.96
VMP1-216ENST00000592790 SRRM4A7MD48 611 aaKnown RBP2.82□□□□□ -1.96
VMP1-216ENST00000592790 APOMO95445 188 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 FAM27E3Q08E93 113 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 CD300EQ496F6 205 aaPredicted RBP2.82□□□□□ -1.96
VMP1-216ENST00000592790 C10orf55Q5SWW7 151 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 ATP1A1-AS1Q5TC04 95 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 C9orf139Q6ZV77 190 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 Q8N7P7 452 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 RNASE8Q8TDE3 154 aaKnown RBP2.82□□□□□ -1.96
VMP1-216ENST00000592790 FAM168AQ92567 244 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 MLST8Q9BVC4 326 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 TNFRSF18Q9Y5U5 241 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 CACNA1DQ01668 2161 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 CHD3Q12873 2000 aaKnown RBP2.82□□□□□ -1.96
VMP1-216ENST00000592790 WDFY4Q6ZS81 3184 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 MED12Q93074 2177 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 A4D1N5 150 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 NPIPB6E9PJ23 425 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 SNCGO76070 127 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 ZNF138P52744 262 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 UCNP55089 124 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 MLANAQ16655 118 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 MRPL51Q4U2R6 128 aaKnown RBP2.82□□□□□ -1.96
VMP1-216ENST00000592790 ZNF503Q96F45 646 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 LINC00477Q96M19 166 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 LENEPQ9Y5L5 61 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 PI4KAP42356 2102 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 RTTNQ86VV8 2226 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 FER1L5A0AVI2 2057 aa2.82□□□□□ -1.96
VMP1-216ENST00000592790 EML6Q6ZMW3 1958 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms