RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	ARV1	Q9H2C2	271 aa		12.55	□□□□□ -0.4
CIRBP-238	ENST00000592412	TMPRSS5	Q9H3S3	457 aa		12.55	□□□□□ -0.4
CIRBP-238	ENST00000592412		A0A096LPF7	62 aa		12.54	□□□□□ -0.4
CIRBP-238	ENST00000592412		K7EPK0	472 aa		12.54	□□□□□ -0.4
CIRBP-238	ENST00000592412	ADAP1	O75689	374 aa		12.54	□□□□□ -0.4
CIRBP-238	ENST00000592412	CXCL2	P19875	107 aa		12.54	□□□□□ -0.4
CIRBP-238	ENST00000592412	ANXA7	P20073	488 aa	Known RBP	12.54	□□□□□ -0.4
CIRBP-238	ENST00000592412	SELENOT	P62341	195 aa		12.54	□□□□□ -0.4
CIRBP-238	ENST00000592412	C9orf170	A2RU37	121 aa		12.53	□□□□□ -0.4
CIRBP-238	ENST00000592412		H3BTX0	84 aa		12.53	□□□□□ -0.4
CIRBP-238	ENST00000592412	RLN2	P04090	185 aa		12.53	□□□□□ -0.4
CIRBP-238	ENST00000592412	OR4E1	P0C645	316 aa		12.53	□□□□□ -0.4
CIRBP-238	ENST00000592412	RRAS2	P62070	204 aa	Predicted RBP	12.53	□□□□□ -0.4
CIRBP-238	ENST00000592412	SLC38A11	Q08AI6	406 aa		12.53	□□□□□ -0.4
CIRBP-238	ENST00000592412	C4orf46	Q504U0	113 aa		12.53	□□□□□ -0.4
CIRBP-238	ENST00000592412	MORN5	Q5VZ52	161 aa		12.53	□□□□□ -0.4
CIRBP-238	ENST00000592412	LCN15	Q6UWW0	184 aa		12.53	□□□□□ -0.4
CIRBP-238	ENST00000592412		Q6ZTI0	123 aa		12.53	□□□□□ -0.4
CIRBP-238	ENST00000592412	LYPD1	Q8N2G4	141 aa		12.53	□□□□□ -0.4
CIRBP-238	ENST00000592412	C20orf85	Q9H1P6	137 aa		12.53	□□□□□ -0.4
CIRBP-238	ENST00000592412	PSENEN	Q9NZ42	101 aa		12.53	□□□□□ -0.4
CIRBP-238	ENST00000592412	DNAH8	Q96JB1	4490 aa		12.52	□□□□□ -0.4
CIRBP-238	ENST00000592412	TCRB	P04435	133 aa		12.52	□□□□□ -0.41
CIRBP-238	ENST00000592412	INAFM2	P0DMQ5	153 aa		12.52	□□□□□ -0.41
CIRBP-238	ENST00000592412	MZT2B	Q6NZ67	158 aa		12.52	□□□□□ -0.41
CIRBP-238	ENST00000592412	TMEM14EP	Q6UXP3	125 aa		12.52	□□□□□ -0.41
CIRBP-238	ENST00000592412	TRAV6	A0A075B6T7	132 aa		12.51	□□□□□ -0.41
CIRBP-238	ENST00000592412	FAM240B	A0A1B0GVZ2	78 aa		12.51	□□□□□ -0.41
CIRBP-238	ENST00000592412	SNURFL	B1AK76	121 aa		12.51	□□□□□ -0.41
CIRBP-238	ENST00000592412	UPK1B	O75841	260 aa		12.51	□□□□□ -0.41
CIRBP-238	ENST00000592412	CT45A10	P0DMU9	189 aa		12.51	□□□□□ -0.41
CIRBP-238	ENST00000592412	DAZ2	Q13117	558 aa	Known RBP	12.51	□□□□□ -0.41
CIRBP-238	ENST00000592412	LINC00305	Q7Z4B0	112 aa		12.51	□□□□□ -0.41
CIRBP-238	ENST00000592412	CCDC28A	Q8IWP9	274 aa		12.51	□□□□□ -0.41
CIRBP-238	ENST00000592412	SLC50A1	Q9BRV3	221 aa		12.51	□□□□□ -0.41
CIRBP-238	ENST00000592412	FLG2	Q5D862	2391 aa	Predicted RBP	12.51	□□□□□ -0.41
CIRBP-238	ENST00000592412		J3KRW8	73 aa		12.5	□□□□□ -0.41
CIRBP-238	ENST00000592412	SSSCA1	O60232	199 aa		12.5	□□□□□ -0.41
CIRBP-238	ENST00000592412	METTL15P1	P0C7V9	234 aa		12.5	□□□□□ -0.41
CIRBP-238	ENST00000592412	ASAH1	Q13510	395 aa		12.5	□□□□□ -0.41
CIRBP-238	ENST00000592412	ZNF431	Q8TF32	576 aa	Predicted RBP	12.5	□□□□□ -0.41
CIRBP-238	ENST00000592412	TMEM37	Q8WXS4	190 aa		12.5	□□□□□ -0.41
CIRBP-238	ENST00000592412	SAT2	Q96F10	170 aa	Predicted RBP	12.5	□□□□□ -0.41
CIRBP-238	ENST00000592412	SMIM8	Q96KF7	97 aa		12.5	□□□□□ -0.41
CIRBP-238	ENST00000592412	NPVF	Q9HCQ7	196 aa		12.5	□□□□□ -0.41
CIRBP-238	ENST00000592412	NUDT15	Q9NV35	164 aa		12.5	□□□□□ -0.41
CIRBP-238	ENST00000592412	TNFRSF18	Q9Y5U5	241 aa		12.5	□□□□□ -0.41
CIRBP-238	ENST00000592412	TRAV12-3	A0A0B4J271	114 aa		12.49	□□□□□ -0.41
CIRBP-238	ENST00000592412	FNDC10	F2Z333	226 aa		12.49	□□□□□ -0.41
CIRBP-238	ENST00000592412		H3BQ15	152 aa		12.49	□□□□□ -0.41
CIRBP-238	ENST00000592412	IGLC2	P0DOY2	106 aa		12.49	□□□□□ -0.41
CIRBP-238	ENST00000592412	ARL16	Q0P5N6	197 aa		12.49	□□□□□ -0.41
CIRBP-238	ENST00000592412	TEPP	Q6URK8	271 aa		12.49	□□□□□ -0.41
CIRBP-238	ENST00000592412	C11orf72	Q8NBR9	251 aa		12.49	□□□□□ -0.41
CIRBP-238	ENST00000592412	PGPEP1	Q9NXJ5	209 aa		12.49	□□□□□ -0.41
CIRBP-238	ENST00000592412	NPIPB6	E9PJ23	425 aa		12.48	□□□□□ -0.41
CIRBP-238	ENST00000592412	SIVA1	O15304	175 aa		12.48	□□□□□ -0.41
CIRBP-238	ENST00000592412	OPCML	Q14982	345 aa		12.48	□□□□□ -0.41
CIRBP-238	ENST00000592412		Q5VSD8	79 aa		12.48	□□□□□ -0.41
CIRBP-238	ENST00000592412	S100A7A	Q86SG5	101 aa		12.48	□□□□□ -0.41
CIRBP-238	ENST00000592412	BPIFA4P	Q86YQ2	179 aa		12.48	□□□□□ -0.41
CIRBP-238	ENST00000592412	C18orf15	Q96N68	181 aa		12.48	□□□□□ -0.41
CIRBP-238	ENST00000592412	AGPAT2	O15120	278 aa		12.47	□□□□□ -0.41
CIRBP-238	ENST00000592412	H2AFB2	P0C5Z0	115 aa		12.47	□□□□□ -0.41
CIRBP-238	ENST00000592412	DNAH10OS	P0CZ25	163 aa		12.47	□□□□□ -0.41
CIRBP-238	ENST00000592412	KRTAP10-1	P60331	282 aa		12.47	□□□□□ -0.41
CIRBP-238	ENST00000592412	IFITM3	Q01628	133 aa		12.47	□□□□□ -0.41
CIRBP-238	ENST00000592412	PXDC1	Q5TGL8	231 aa		12.47	□□□□□ -0.41
CIRBP-238	ENST00000592412	ENKUR	Q8TC29	256 aa		12.47	□□□□□ -0.41
CIRBP-238	ENST00000592412	ODF3	Q96PU9	254 aa		12.47	□□□□□ -0.41
CIRBP-238	ENST00000592412	PYGO2	Q9BRQ0	406 aa		12.47	□□□□□ -0.41
CIRBP-238	ENST00000592412	GSN-AS1	Q9NRJ2	163 aa		12.47	□□□□□ -0.41
CIRBP-238	ENST00000592412	ZNF546	Q86UE3	836 aa		12.46	□□□□□ -0.41
CIRBP-238	ENST00000592412	MITD1	Q8WV92	249 aa		12.46	□□□□□ -0.41
CIRBP-238	ENST00000592412	MGST2	Q99735	147 aa		12.46	□□□□□ -0.41
CIRBP-238	ENST00000592412	GOSR2	O14653	212 aa		12.45	□□□□□ -0.42
CIRBP-238	ENST00000592412	NXPH4	O95158	308 aa		12.45	□□□□□ -0.42
CIRBP-238	ENST00000592412	LEP	P41159	167 aa		12.45	□□□□□ -0.42
CIRBP-238	ENST00000592412	CDPF1	Q6NVV7	123 aa		12.45	□□□□□ -0.42
CIRBP-238	ENST00000592412	OR10P1	Q8NGE3	313 aa		12.45	□□□□□ -0.42
CIRBP-238	ENST00000592412	MGAT4C	Q9UBM8	478 aa		12.45	□□□□□ -0.42
CIRBP-238	ENST00000592412	RNF24	Q9Y225	148 aa		12.45	□□□□□ -0.42
CIRBP-238	ENST00000592412	RCL1	Q9Y2P8	373 aa	Known RBP	12.45	□□□□□ -0.42
CIRBP-238	ENST00000592412	PXMP4	Q9Y6I8	212 aa		12.45	□□□□□ -0.42
CIRBP-238	ENST00000592412	TRGV2	A0A075B6R0	118 aa		12.44	□□□□□ -0.42
CIRBP-238	ENST00000592412	TRAV5	A0A0B4J249	113 aa		12.44	□□□□□ -0.42
CIRBP-238	ENST00000592412	COX7A2P2	O60397	106 aa		12.44	□□□□□ -0.42
CIRBP-238	ENST00000592412	ERVFC1-1	P60608	527 aa		12.44	□□□□□ -0.42
CIRBP-238	ENST00000592412	SEC22C	Q9BRL7	303 aa		12.44	□□□□□ -0.42
CIRBP-238	ENST00000592412	FUT9	Q9Y231	359 aa		12.44	□□□□□ -0.42
CIRBP-238	ENST00000592412	TSC22D2	O75157	780 aa		12.43	□□□□□ -0.42
CIRBP-238	ENST00000592412	ZNF324	O75467	553 aa	Predicted RBP	12.43	□□□□□ -0.42
CIRBP-238	ENST00000592412	DEFA1	P59665	94 aa		12.43	□□□□□ -0.42
CIRBP-238	ENST00000592412	DEFA3	P59666	94 aa		12.43	□□□□□ -0.42
CIRBP-238	ENST00000592412	FAM19A4	Q96LR4	140 aa		12.43	□□□□□ -0.42
CIRBP-238	ENST00000592412	KLF12	Q9Y4X4	402 aa		12.43	□□□□□ -0.42
CIRBP-238	ENST00000592412		A0A087WTM6	91 aa		12.42	□□□□□ -0.42
CIRBP-238	ENST00000592412	TRGV1	A0A0A0MS02	117 aa		12.42	□□□□□ -0.42
CIRBP-238	ENST00000592412	KLLN	B2CW77	178 aa		12.42	□□□□□ -0.42
CIRBP-238	ENST00000592412	SPINK4	O60575	86 aa		12.42	□□□□□ -0.42

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