RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 OR7C2O60412 319 aa13.12□□□□□ -0.31
VAT1-208ENST00000590924 NBEAP1P0C6P0 100 aa13.12□□□□□ -0.31
VAT1-208ENST00000590924 STAG3L2P0CL84 134 aa13.12□□□□□ -0.31
VAT1-208ENST00000590924 STAG3L3P0CL85 134 aa13.12□□□□□ -0.31
VAT1-208ENST00000590924 FXYD5Q96DB9 178 aa13.12□□□□□ -0.31
VAT1-208ENST00000590924 PYYP10082 97 aa13.11□□□□□ -0.31
VAT1-208ENST00000590924 PSG9Q00887 426 aa13.11□□□□□ -0.31
VAT1-208ENST00000590924 DPPA3Q6W0C5 159 aa13.11□□□□□ -0.31
VAT1-208ENST00000590924 ZNF503Q96F45 646 aa13.11□□□□□ -0.31
VAT1-208ENST00000590924 LINC00052Q96N35 136 aa13.11□□□□□ -0.31
VAT1-208ENST00000590924 KMT2AQ03164 3969 aa13.11□□□□□ -0.31
VAT1-208ENST00000590924 CTXND1A0A1B0GTU2 59 aa13.1□□□□□ -0.31
VAT1-208ENST00000590924 PSG3Q16557 428 aa13.1□□□□□ -0.31
VAT1-208ENST00000590924 LYPD1Q8N2G4 141 aa13.1□□□□□ -0.31
VAT1-208ENST00000590924 PHLDA1Q8WV24 401 aaPredicted RBP13.1□□□□□ -0.31
VAT1-208ENST00000590924 RARRES2Q99969 163 aa13.1□□□□□ -0.31
VAT1-208ENST00000590924 PRELID1Q9Y255 219 aa13.1□□□□□ -0.31
VAT1-208ENST00000590924 NDUFB4O95168 129 aa13.09□□□□□ -0.31
VAT1-208ENST00000590924 CXorf1O96002 111 aa13.09□□□□□ -0.31
VAT1-208ENST00000590924 RAB5CP51148 216 aa13.09□□□□□ -0.31
VAT1-208ENST00000590924 FOXI2Q6ZQN5 318 aa13.09□□□□□ -0.31
VAT1-208ENST00000590924 SUN5Q8TC36 379 aa13.09□□□□□ -0.31
VAT1-208ENST00000590924 MRPL53Q96EL3 112 aaKnown RBP13.09□□□□□ -0.31
VAT1-208ENST00000590924 C20orf173Q96LM9 149 aa13.09□□□□□ -0.31
VAT1-208ENST00000590924 CLUHP3Q96NS8 147 aa13.09□□□□□ -0.31
VAT1-208ENST00000590924 C11orf68Q9H3H3 251 aaKnown RBP13.09□□□□□ -0.31
VAT1-208ENST00000590924 FRAS1Q86XX4 4008 aa13.09□□□□□ -0.31
VAT1-208ENST00000590924 OR10J4P0C629 311 aa13.08□□□□□ -0.32
VAT1-208ENST00000590924 UBE2L3P68036 154 aaKnown RBP13.08□□□□□ -0.32
VAT1-208ENST00000590924 STHQ8IWL8 128 aa13.08□□□□□ -0.32
VAT1-208ENST00000590924 TMED6Q8WW62 240 aa13.08□□□□□ -0.32
VAT1-208ENST00000590924 SAV1Q9H4B6 383 aaPredicted RBP13.08□□□□□ -0.32
VAT1-208ENST00000590924 PLA2G2EQ9NZK7 142 aa13.08□□□□□ -0.32
VAT1-208ENST00000590924 H3BMM0 161 aa13.07□□□□□ -0.32
VAT1-208ENST00000590924 SLC17A3O00476 420 aa13.07□□□□□ -0.32
VAT1-208ENST00000590924 SNRPCP09234 159 aaKnown RBP13.07□□□□□ -0.32
VAT1-208ENST00000590924 HLA-DRB4P13762 266 aa13.07□□□□□ -0.32
VAT1-208ENST00000590924 NKX2-5P52952 324 aaPredicted RBP13.07□□□□□ -0.32
VAT1-208ENST00000590924 ZNF726P1Q15940 193 aa13.07□□□□□ -0.32
VAT1-208ENST00000590924 EBLN2Q6P2I7 272 aa13.07□□□□□ -0.32
VAT1-208ENST00000590924 TRPT1Q86TN4 253 aaKnown RBP13.07□□□□□ -0.32
VAT1-208ENST00000590924 OR11H2Q8NH07 326 aa13.07□□□□□ -0.32
VAT1-208ENST00000590924 BLNKQ8WV28 456 aa13.07□□□□□ -0.32
VAT1-208ENST00000590924 PHYHIPLQ96FC7 376 aa13.07□□□□□ -0.32
VAT1-208ENST00000590924 AAMDCQ9H7C9 122 aa13.07□□□□□ -0.32
VAT1-208ENST00000590924 TMEM167BQ9NRX6 74 aa13.07□□□□□ -0.32
VAT1-208ENST00000590924 HLA-DRB4X5D2U9 266 aa13.07□□□□□ -0.32
VAT1-208ENST00000590924 A0A0J9YX75 114 aa13.06□□□□□ -0.32
VAT1-208ENST00000590924 KNCNA6PVL3 124 aa13.06□□□□□ -0.32
VAT1-208ENST00000590924 H3BTX0 84 aa13.06□□□□□ -0.32
VAT1-208ENST00000590924 CA1P00915 261 aaPredicted RBP13.06□□□□□ -0.32
VAT1-208ENST00000590924 ARL14EPLP0DKL9 152 aa13.06□□□□□ -0.32
VAT1-208ENST00000590924 GCHFRP30047 84 aa13.06□□□□□ -0.32
VAT1-208ENST00000590924 ACTL10Q5JWF8 245 aa13.06□□□□□ -0.32
VAT1-208ENST00000590924 IGFL4Q6B9Z1 124 aa13.06□□□□□ -0.32
VAT1-208ENST00000590924 RNF182Q8N6D2 247 aa13.06□□□□□ -0.32
VAT1-208ENST00000590924 ZNF738Q8NE65 137 aa13.06□□□□□ -0.32
VAT1-208ENST00000590924 MBD3L1Q8WWY6 194 aa13.06□□□□□ -0.32
VAT1-208ENST00000590924 HMGB3O15347 200 aaKnown RBP13.05□□□□□ -0.32
VAT1-208ENST00000590924 DUSP14O95147 198 aaKnown RBP13.05□□□□□ -0.32
VAT1-208ENST00000590924 MORN3Q6PF18 240 aaPredicted RBP13.05□□□□□ -0.32
VAT1-208ENST00000590924 ARL6IP6Q8N6S5 226 aa13.05□□□□□ -0.32
VAT1-208ENST00000590924 RPUSD4Q96CM3 377 aaKnown RBP13.05□□□□□ -0.32
VAT1-208ENST00000590924 A8MTW9 85 aa13.04□□□□□ -0.32
VAT1-208ENST00000590924 EIF3GO75821 320 aaKnown RBP eCLIP13.04□□□□□ -0.32
VAT1-208ENST00000590924 HLA-DMBP28068 263 aa13.04□□□□□ -0.32
VAT1-208ENST00000590924 SULT1A2P50226 295 aa13.04□□□□□ -0.32
VAT1-208ENST00000590924 LGALS9CQ6DKI2 356 aa13.04□□□□□ -0.32
VAT1-208ENST00000590924 SSX7Q7RTT5 188 aa13.04□□□□□ -0.32
VAT1-208ENST00000590924 C11orf45Q8TAV5 145 aa13.04□□□□□ -0.32
VAT1-208ENST00000590924 MAP1LC3B2A6NCE7 125 aa13.03□□□□□ -0.32
VAT1-208ENST00000590924 NANOS2P60321 138 aaKnown RBP13.03□□□□□ -0.32
VAT1-208ENST00000590924 NUTF2P61970 127 aaKnown RBP13.03□□□□□ -0.32
VAT1-208ENST00000590924 RANP62826 216 aaKnown RBP13.03□□□□□ -0.32
VAT1-208ENST00000590924 FAM74A1Q5RGS3 127 aa13.03□□□□□ -0.32
VAT1-208ENST00000590924 OR8A1Q8NGG7 326 aa13.03□□□□□ -0.32
VAT1-208ENST00000590924 FAM213BQ8TBF2 198 aa13.03□□□□□ -0.32
VAT1-208ENST00000590924 MAP1LC3BQ9GZQ8 125 aa13.03□□□□□ -0.32
VAT1-208ENST00000590924 H2AFB1P0C5Y9 115 aa13.02□□□□□ -0.33
VAT1-208ENST00000590924 FHITP49789 147 aa13.02□□□□□ -0.33
VAT1-208ENST00000590924 ICAM4Q14773 271 aa13.02□□□□□ -0.33
VAT1-208ENST00000590924 GDF5OSQ5U4N7 250 aa13.02□□□□□ -0.33
VAT1-208ENST00000590924 EXOC3-AS1Q8N2X6 119 aa13.02□□□□□ -0.33
VAT1-208ENST00000590924 RXFP4Q8TDU9 374 aa13.02□□□□□ -0.33
VAT1-208ENST00000590924 Q9H3A6 140 aa13.02□□□□□ -0.33
VAT1-208ENST00000590924 OTORQ9NRC9 128 aa13.02□□□□□ -0.33
VAT1-208ENST00000590924 BOLA1Q9Y3E2 137 aa13.02□□□□□ -0.33
VAT1-208ENST00000590924 TRAV1-1A0A0B4J248 108 aa13.01□□□□□ -0.33
VAT1-208ENST00000590924 A0A1W2PRE2 83 aa13.01□□□□□ -0.33
VAT1-208ENST00000590924 ZNF705FA8MVS1 300 aaPredicted RBP13.01□□□□□ -0.33
VAT1-208ENST00000590924 F6UB75 175 aa13.01□□□□□ -0.33
VAT1-208ENST00000590924 SFT2D1Q8WV19 159 aa13.01□□□□□ -0.33
VAT1-208ENST00000590924 CSN1S1P47710 185 aa13□□□□□ -0.33
VAT1-208ENST00000590924 CNN1P51911 297 aaKnown RBP13□□□□□ -0.33
VAT1-208ENST00000590924 DEFB1P60022 68 aa13□□□□□ -0.33
VAT1-208ENST00000590924 Q8NAQ8 132 aa13□□□□□ -0.33
VAT1-208ENST00000590924 OR4B1Q8NGF8 309 aa13□□□□□ -0.33
VAT1-208ENST00000590924 OR10J6PQ8NGY7 276 aa13□□□□□ -0.33
VAT1-208ENST00000590924 C1QTNF4Q9BXJ3 329 aa13□□□□□ -0.33
VAT1-208ENST00000590924 NKX6-2Q9C056 277 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms