RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 IGKV3-20P01619 116 aa14.08□□□□□ -0.16
DDX39A-214ENST00000590556 NHLRC4P0CG21 123 aaPredicted RBP14.08□□□□□ -0.16
DDX39A-214ENST00000590556 FHITP49789 147 aa14.08□□□□□ -0.16
DDX39A-214ENST00000590556 RANP62826 216 aaKnown RBP14.08□□□□□ -0.16
DDX39A-214ENST00000590556 DPPA3Q6W0C5 159 aa14.08□□□□□ -0.16
DDX39A-214ENST00000590556 OR4B1Q8NGF8 309 aa14.08□□□□□ -0.16
DDX39A-214ENST00000590556 FAM213BQ8TBF2 198 aa14.08□□□□□ -0.16
DDX39A-214ENST00000590556 UBE2CO00762 179 aa14.07□□□□□ -0.16
DDX39A-214ENST00000590556 DUSP14O95147 198 aaKnown RBP14.07□□□□□ -0.16
DDX39A-214ENST00000590556 ZNF705DP0CH99 300 aaPredicted RBP14.07□□□□□ -0.16
DDX39A-214ENST00000590556 ZNF705BP0CI00 300 aaPredicted RBP14.07□□□□□ -0.16
DDX39A-214ENST00000590556 PRB4P10163 310 aaPredicted RBP14.07□□□□□ -0.16
DDX39A-214ENST00000590556 ICAM4Q14773 271 aa14.07□□□□□ -0.16
DDX39A-214ENST00000590556 IQCF2Q8IXL9 164 aa14.07□□□□□ -0.16
DDX39A-214ENST00000590556 LYPD1Q8N2G4 141 aa14.07□□□□□ -0.16
DDX39A-214ENST00000590556 OR8A1Q8NGG7 326 aa14.07□□□□□ -0.16
DDX39A-214ENST00000590556 MRPL53Q96EL3 112 aaKnown RBP14.07□□□□□ -0.16
DDX39A-214ENST00000590556 TMEM167BQ9NRX6 74 aa14.07□□□□□ -0.16
DDX39A-214ENST00000590556 BOLA1Q9Y3E2 137 aa14.07□□□□□ -0.16
DDX39A-214ENST00000590556 MAP1LC3B2A6NCE7 125 aa14.06□□□□□ -0.16
DDX39A-214ENST00000590556 M0R3E3 92 aa14.06□□□□□ -0.16
DDX39A-214ENST00000590556 FGF8P55075 233 aaPredicted RBP14.06□□□□□ -0.16
DDX39A-214ENST00000590556 HIST1H1AQ02539 215 aaPredicted RBP14.06□□□□□ -0.16
DDX39A-214ENST00000590556 MORN3Q6PF18 240 aaPredicted RBP14.06□□□□□ -0.16
DDX39A-214ENST00000590556 CLUHP3Q96NS8 147 aa14.06□□□□□ -0.16
DDX39A-214ENST00000590556 TM2D3Q9BRN9 247 aa14.06□□□□□ -0.16
DDX39A-214ENST00000590556 MAP1LC3BQ9GZQ8 125 aa14.06□□□□□ -0.16
DDX39A-214ENST00000590556 Q9H3A6 140 aa14.06□□□□□ -0.16
DDX39A-214ENST00000590556 NBEAL2Q6ZNJ1 2754 aa14.05□□□□□ -0.16
DDX39A-214ENST00000590556 TGP01266 2768 aa14.05□□□□□ -0.16
DDX39A-214ENST00000590556 PRAC2D3DTV9 90 aa14.05□□□□□ -0.16
DDX39A-214ENST00000590556 CA1P00915 261 aaPredicted RBP14.05□□□□□ -0.16
DDX39A-214ENST00000590556 RAB5CP51148 216 aa14.05□□□□□ -0.16
DDX39A-214ENST00000590556 CNN1P51911 297 aaKnown RBP14.05□□□□□ -0.16
DDX39A-214ENST00000590556 NUTF2P61970 127 aaKnown RBP14.05□□□□□ -0.16
DDX39A-214ENST00000590556 OR10J6PQ8NGY7 276 aa14.05□□□□□ -0.16
DDX39A-214ENST00000590556 SUN5Q8TC36 379 aa14.05□□□□□ -0.16
DDX39A-214ENST00000590556 SPATA25Q9BR10 227 aa14.05□□□□□ -0.16
DDX39A-214ENST00000590556 ZMAT4Q9H898 229 aa14.05□□□□□ -0.16
DDX39A-214ENST00000590556 SFT2D1Q8WV19 159 aa14.04□□□□□ -0.16
DDX39A-214ENST00000590556 MBD3L1Q8WWY6 194 aa14.04□□□□□ -0.16
DDX39A-214ENST00000590556 TMPRSS5Q9H3S3 457 aa14.04□□□□□ -0.16
DDX39A-214ENST00000590556 OTORQ9NRC9 128 aa14.04□□□□□ -0.16
DDX39A-214ENST00000590556 BOLA2-SMG1P6H3BVE0 249 aa14.03□□□□□ -0.16
DDX39A-214ENST00000590556 H2AFB1P0C5Y9 115 aa14.03□□□□□ -0.16
DDX39A-214ENST00000590556 CSN1S1P47710 185 aa14.03□□□□□ -0.16
DDX39A-214ENST00000590556 SULT1A2P50226 295 aa14.03□□□□□ -0.16
DDX39A-214ENST00000590556 FAM74A1Q5RGS3 127 aa14.03□□□□□ -0.16
DDX39A-214ENST00000590556 Q6ZWC4 215 aa14.03□□□□□ -0.16
DDX39A-214ENST00000590556 DNAH9Q9NYC9 4486 aa14.03□□□□□ -0.16
DDX39A-214ENST00000590556 PGPA6NDG6 321 aa14.02□□□□□ -0.17
DDX39A-214ENST00000590556 A8MTW9 85 aa14.02□□□□□ -0.17
DDX39A-214ENST00000590556 DEFB135Q30KP9 77 aa14.02□□□□□ -0.17
DDX39A-214ENST00000590556 RETNQ9HD89 108 aa14.02□□□□□ -0.17
DDX39A-214ENST00000590556 PPP1R14DQ9NXH3 145 aa14.02□□□□□ -0.17
DDX39A-214ENST00000590556 GIG44P09565 113 aaPredicted RBP14.01□□□□□ -0.17
DDX39A-214ENST00000590556 FXYD7P58549 80 aa14.01□□□□□ -0.17
DDX39A-214ENST00000590556 CMTM2Q8TAZ6 248 aa14.01□□□□□ -0.17
DDX39A-214ENST00000590556 RXFP4Q8TDU9 374 aa14.01□□□□□ -0.17
DDX39A-214ENST00000590556 SLC35B3Q9H1N7 401 aa14.01□□□□□ -0.17
DDX39A-214ENST00000590556 COL7A1Q02388 2944 aa14.01□□□□□ -0.17
DDX39A-214ENST00000590556 A0A1B0GV50 99 aa14□□□□□ -0.17
DDX39A-214ENST00000590556 SPRY2O43597 315 aa14□□□□□ -0.17
DDX39A-214ENST00000590556 AMTNQ6UX39 209 aa14□□□□□ -0.17
DDX39A-214ENST00000590556 ALKAL2Q6UX46 152 aa14□□□□□ -0.17
DDX39A-214ENST00000590556 RCHY1Q96PM5 261 aa14□□□□□ -0.17
DDX39A-214ENST00000590556 C1QTNF4Q9BXJ3 329 aa14□□□□□ -0.17
DDX39A-214ENST00000590556 XCL2Q9UBD3 114 aa14□□□□□ -0.17
DDX39A-214ENST00000590556 IGKV2-40A0A087WW87 121 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-214ENST00000590556 NPIPB6E9PJ23 425 aa13.99□□□□□ -0.17
DDX39A-214ENST00000590556 IGKV2D-40P01614 121 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-214ENST00000590556 UBE2G2P60604 165 aa13.99□□□□□ -0.17
DDX39A-214ENST00000590556 RNF183Q96D59 192 aa13.99□□□□□ -0.17
DDX39A-214ENST00000590556 OVOL2Q9BRP0 275 aa13.99□□□□□ -0.17
DDX39A-214ENST00000590556 TP53TG1Q9Y2A0 90 aa13.99□□□□□ -0.17
DDX39A-214ENST00000590556 A0A1W2PRE2 83 aa13.98□□□□□ -0.17
DDX39A-214ENST00000590556 SLC25A5P05141 298 aaKnown RBP13.98□□□□□ -0.17
DDX39A-214ENST00000590556 SUMO1P63165 101 aaKnown RBP13.98□□□□□ -0.17
DDX39A-214ENST00000590556 ERCC8Q13216 396 aa13.98□□□□□ -0.17
DDX39A-214ENST00000590556 RPH3ALQ9UNE2 315 aa13.98□□□□□ -0.17
DDX39A-214ENST00000590556 YTHDF2Q9Y5A9 579 aaKnown RBP13.98□□□□□ -0.17
DDX39A-214ENST00000590556 TENM3Q9P273 2699 aa13.98□□□□□ -0.17
DDX39A-214ENST00000590556 ZNF705EA8MWA4 302 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-214ENST00000590556 DIRC3C9JPN6 131 aa13.97□□□□□ -0.17
DDX39A-214ENST00000590556 SPINK13Q1W4C9 94 aa13.97□□□□□ -0.17
DDX39A-214ENST00000590556 ARL6IP6Q8N6S5 226 aa13.97□□□□□ -0.17
DDX39A-214ENST00000590556 C5orf17Q8NAS9 161 aa13.97□□□□□ -0.17
DDX39A-214ENST00000590556 LINC00477Q96M19 166 aa13.97□□□□□ -0.17
DDX39A-214ENST00000590556 AGPAT4-IT1Q9H0P7 198 aa13.97□□□□□ -0.17
DDX39A-214ENST00000590556 U3KQK5 164 aa13.97□□□□□ -0.17
DDX39A-214ENST00000590556 TRAV1-1A0A0B4J248 108 aa13.96□□□□□ -0.17
DDX39A-214ENST00000590556 RBAKDNA6NC62 111 aa13.96□□□□□ -0.17
DDX39A-214ENST00000590556 FAM74A7A6NL05 159 aa13.96□□□□□ -0.17
DDX39A-214ENST00000590556 GGTLC3B5MD39 225 aa13.96□□□□□ -0.17
DDX39A-214ENST00000590556 TEX46H3BTG2 121 aa13.96□□□□□ -0.17
DDX39A-214ENST00000590556 M0R2Z0 102 aa13.96□□□□□ -0.17
DDX39A-214ENST00000590556 AMBPP02760 352 aa13.96□□□□□ -0.17
DDX39A-214ENST00000590556 CT45A10P0DMU9 189 aa13.96□□□□□ -0.17
DDX39A-214ENST00000590556 TMEM78Q5T7P6 136 aa13.96□□□□□ -0.17
DDX39A-214ENST00000590556 C9orf47Q6ZRZ4 202 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms