RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 LYPD6BQ8NI32 183 aa8.91□□□□□ -0.98
APOC1-206ENST00000590334 CLUHP3Q96NS8 147 aa8.91□□□□□ -0.98
APOC1-206ENST00000590334 SRD5A3Q9H8P0 318 aa8.91□□□□□ -0.98
APOC1-206ENST00000590334 OTORQ9NRC9 128 aa8.91□□□□□ -0.98
APOC1-206ENST00000590334 COL7A1Q02388 2944 aa8.91□□□□□ -0.98
APOC1-206ENST00000590334 RBMY1BA6NDE4 496 aaKnown RBP8.9□□□□□ -0.98
APOC1-206ENST00000590334 RBMY1EA6NEQ0 496 aaKnown RBP8.9□□□□□ -0.98
APOC1-206ENST00000590334 ZNF705FA8MVS1 300 aaPredicted RBP8.9□□□□□ -0.98
APOC1-206ENST00000590334 H3BMM0 161 aa8.9□□□□□ -0.98
APOC1-206ENST00000590334 TEX46H3BTG2 121 aa8.9□□□□□ -0.98
APOC1-206ENST00000590334 M0R3E3 92 aa8.9□□□□□ -0.98
APOC1-206ENST00000590334 RBMY1DP0C7P1 496 aaKnown RBP8.9□□□□□ -0.98
APOC1-206ENST00000590334 HLA-DRB4P13762 266 aa8.9□□□□□ -0.98
APOC1-206ENST00000590334 PPT1P50897 306 aa8.9□□□□□ -0.98
APOC1-206ENST00000590334 GDF5OSQ5U4N7 250 aa8.9□□□□□ -0.98
APOC1-206ENST00000590334 TRPT1Q86TN4 253 aaKnown RBP8.9□□□□□ -0.98
APOC1-206ENST00000590334 IQCF2Q8IXL9 164 aa8.9□□□□□ -0.98
APOC1-206ENST00000590334 RPUSD4Q96CM3 377 aaKnown RBP8.9□□□□□ -0.98
APOC1-206ENST00000590334 NKX6-2Q9C056 277 aaPredicted RBP8.9□□□□□ -0.98
APOC1-206ENST00000590334 HLA-DRB4X5D2U9 266 aa8.9□□□□□ -0.98
APOC1-206ENST00000590334 AGRNO00468 2067 aa8.9□□□□□ -0.99
APOC1-206ENST00000590334 PGPA6NDG6 321 aa8.89□□□□□ -0.99
APOC1-206ENST00000590334 FAM74A7A6NL05 159 aa8.89□□□□□ -0.99
APOC1-206ENST00000590334 KNCNA6PVL3 124 aa8.89□□□□□ -0.99
APOC1-206ENST00000590334 GGTLC3B5MD39 225 aa8.89□□□□□ -0.99
APOC1-206ENST00000590334 F6UB75 175 aa8.89□□□□□ -0.99
APOC1-206ENST00000590334 DEFB1P60022 68 aa8.89□□□□□ -0.99
APOC1-206ENST00000590334 CCL20P78556 96 aa8.89□□□□□ -0.99
APOC1-206ENST00000590334 ACTL10Q5JWF8 245 aa8.89□□□□□ -0.99
APOC1-206ENST00000590334 EBLN2Q6P2I7 272 aa8.89□□□□□ -0.99
APOC1-206ENST00000590334 STHQ8IWL8 128 aa8.89□□□□□ -0.99
APOC1-206ENST00000590334 OR8A1Q8NGG7 326 aa8.89□□□□□ -0.99
APOC1-206ENST00000590334 TUBA4BQ9H853 241 aa8.89□□□□□ -0.99
APOC1-206ENST00000590334 YTHDF2Q9Y5A9 579 aaKnown RBP8.89□□□□□ -0.99
APOC1-206ENST00000590334 LOC102724200A0A096LPH7 203 aaPredicted RBP8.88□□□□□ -0.99
APOC1-206ENST00000590334 PRAC2D3DTV9 90 aa8.88□□□□□ -0.99
APOC1-206ENST00000590334 DUSP14O95147 198 aaKnown RBP8.88□□□□□ -0.99
APOC1-206ENST00000590334 FRMD6-AS1P0C7T7 363 aa8.88□□□□□ -0.99
APOC1-206ENST00000590334 CCDC28AQ8IWP9 274 aa8.88□□□□□ -0.99
APOC1-206ENST00000590334 MRAPQ8TCY5 172 aa8.88□□□□□ -0.99
APOC1-206ENST00000590334 RXFP4Q8TDU9 374 aa8.88□□□□□ -0.99
APOC1-206ENST00000590334 MANBALQ9NQG1 85 aa8.88□□□□□ -0.99
APOC1-206ENST00000590334 KIR2DL5BA0A0G2JN68 375 aa8.87□□□□□ -0.99
APOC1-206ENST00000590334 KIR2DL5BA0A0G2JPC4 375 aa8.87□□□□□ -0.99
APOC1-206ENST00000590334 A0A1B0GV50 99 aa8.87□□□□□ -0.99
APOC1-206ENST00000590334 RBAKDNA6NC62 111 aa8.87□□□□□ -0.99
APOC1-206ENST00000590334 DIRC3C9JPN6 131 aa8.87□□□□□ -0.99
APOC1-206ENST00000590334 NPIPB6E9PJ23 425 aa8.87□□□□□ -0.99
APOC1-206ENST00000590334 SLC25A5P05141 298 aaKnown RBP8.87□□□□□ -0.99
APOC1-206ENST00000590334 CSN1S1P47710 185 aa8.87□□□□□ -0.99
APOC1-206ENST00000590334 UBE2G2P60604 165 aa8.87□□□□□ -0.99
APOC1-206ENST00000590334 SUMO1P63165 101 aaKnown RBP8.87□□□□□ -0.99
APOC1-206ENST00000590334 IFITM2Q01629 132 aa8.87□□□□□ -0.99
APOC1-206ENST00000590334 DEFB121Q5J5C9 76 aa8.87□□□□□ -0.99
APOC1-206ENST00000590334 KIR2DL5AQ8N109 375 aa8.87□□□□□ -0.99
APOC1-206ENST00000590334 C5orf17Q8NAS9 161 aa8.87□□□□□ -0.99
APOC1-206ENST00000590334 OR10J6PQ8NGY7 276 aa8.87□□□□□ -0.99
APOC1-206ENST00000590334 KIR2DL5BQ8NHK3 375 aa8.87□□□□□ -0.99
APOC1-206ENST00000590334 PAGE4O60829 102 aa8.86□□□□□ -0.99
APOC1-206ENST00000590334 ZNF705DP0CH99 300 aaPredicted RBP8.86□□□□□ -0.99
APOC1-206ENST00000590334 ZNF705BP0CI00 300 aaPredicted RBP8.86□□□□□ -0.99
APOC1-206ENST00000590334 CNN1P51911 297 aaKnown RBP8.86□□□□□ -0.99
APOC1-206ENST00000590334 MORN3Q6PF18 240 aaPredicted RBP8.86□□□□□ -0.99
APOC1-206ENST00000590334 AMTNQ6UX39 209 aa8.86□□□□□ -0.99
APOC1-206ENST00000590334 C9orf47Q6ZRZ4 202 aa8.86□□□□□ -0.99
APOC1-206ENST00000590334 ZNF767PQ75MW2 155 aa8.86□□□□□ -0.99
APOC1-206ENST00000590334 CMTM2Q8TAZ6 248 aa8.86□□□□□ -0.99
APOC1-206ENST00000590334 TCEAL7Q9BRU2 100 aa8.86□□□□□ -0.99
APOC1-206ENST00000590334 EPDR1Q9UM22 224 aa8.86□□□□□ -0.99
APOC1-206ENST00000590334 PRKDCP78527 4128 aaKnown RBP8.85□□□□□ -0.99
APOC1-206ENST00000590334 IGKV2-40A0A087WW87 121 aaPredicted RBP8.85□□□□□ -0.99
APOC1-206ENST00000590334 SERTM2A0A1B0GWG4 89 aa8.85□□□□□ -0.99
APOC1-206ENST00000590334 IFNA1P01562 189 aa8.85□□□□□ -0.99
APOC1-206ENST00000590334 IGKV2D-40P01614 121 aaPredicted RBP8.85□□□□□ -0.99
APOC1-206ENST00000590334 NMBP08949 121 aa8.85□□□□□ -0.99
APOC1-206ENST00000590334 RPL35AP18077 110 aaKnown RBP8.85□□□□□ -0.99
APOC1-206ENST00000590334 TAGLN2P37802 199 aaKnown RBP8.85□□□□□ -0.99
APOC1-206ENST00000590334 APOC4P55056 127 aa8.85□□□□□ -0.99
APOC1-206ENST00000590334 HIST1H1AQ02539 215 aaPredicted RBP8.85□□□□□ -0.99
APOC1-206ENST00000590334 LINC00477Q96M19 166 aa8.85□□□□□ -0.99
APOC1-206ENST00000590334 ODF3Q96PU9 254 aa8.85□□□□□ -0.99
APOC1-206ENST00000590334 TXNDC17Q9BRA2 123 aa8.85□□□□□ -0.99
APOC1-206ENST00000590334 PPP1R14DQ9NXH3 145 aa8.85□□□□□ -0.99
APOC1-206ENST00000590334 GNG13Q9P2W3 67 aa8.85□□□□□ -0.99
APOC1-206ENST00000590334 UBE2CO00762 179 aa8.84□□□□□ -0.99
APOC1-206ENST00000590334 TCRAP04437 139 aa8.84□□□□□ -0.99
APOC1-206ENST00000590334 GIG44P09565 113 aaPredicted RBP8.84□□□□□ -0.99
APOC1-206ENST00000590334 ATP5G3P48201 142 aa8.84□□□□□ -0.99
APOC1-206ENST00000590334 NUTF2P61970 127 aaKnown RBP8.84□□□□□ -0.99
APOC1-206ENST00000590334 GNG5P63218 68 aa8.84□□□□□ -0.99
APOC1-206ENST00000590334 HAGHQ16775 308 aa8.84□□□□□ -0.99
APOC1-206ENST00000590334 CST9LP1Q5W188 147 aa8.84□□□□□ -0.99
APOC1-206ENST00000590334 OR4B1Q8NGF8 309 aa8.84□□□□□ -0.99
APOC1-206ENST00000590334 HIST1H2BAQ96A08 127 aa8.84□□□□□ -0.99
APOC1-206ENST00000590334 FAM19A4Q96LR4 140 aa8.84□□□□□ -0.99
APOC1-206ENST00000590334 VGLL1Q99990 258 aa8.84□□□□□ -0.99
APOC1-206ENST00000590334 B9D2Q9BPU9 175 aa8.84□□□□□ -0.99
APOC1-206ENST00000590334 ATG101Q9BSB4 218 aa8.84□□□□□ -0.99
APOC1-206ENST00000590334 AGPAT4-IT1Q9H0P7 198 aa8.84□□□□□ -0.99
APOC1-206ENST00000590334 CSTL1Q9H114 145 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms