RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 CASC10Q5T4H9 136 aa7.59□□□□□ -1.19
SDF2-208ENST00000589788 ALKAL2Q6UX46 152 aa7.59□□□□□ -1.19
SDF2-208ENST00000589788 ZNF680Q8NEM1 530 aa7.59□□□□□ -1.19
SDF2-208ENST00000589788 UHRF2Q96PU4 802 aa7.59□□□□□ -1.19
SDF2-208ENST00000589788 RARRES2Q99969 163 aa7.59□□□□□ -1.19
SDF2-208ENST00000589788 A0A0J9YWU9 116 aa7.58□□□□□ -1.2
SDF2-208ENST00000589788 SOCS3O14543 225 aa7.58□□□□□ -1.2
SDF2-208ENST00000589788 M6PRP20645 277 aa7.58□□□□□ -1.2
SDF2-208ENST00000589788 SULT1A2P50226 295 aa7.58□□□□□ -1.2
SDF2-208ENST00000589788 RAB5CP51148 216 aa7.58□□□□□ -1.2
SDF2-208ENST00000589788 NUTF2P61970 127 aaKnown RBP7.58□□□□□ -1.2
SDF2-208ENST00000589788 ACOT6Q3I5F7 207 aaPredicted RBP7.58□□□□□ -1.2
SDF2-208ENST00000589788 C10orf113Q5VZT2 155 aa7.58□□□□□ -1.2
SDF2-208ENST00000589788 PATE2Q6UY27 113 aa7.58□□□□□ -1.2
SDF2-208ENST00000589788 Q6ZRG5 221 aa7.58□□□□□ -1.2
SDF2-208ENST00000589788 ZNF767PQ75MW2 155 aa7.58□□□□□ -1.2
SDF2-208ENST00000589788 LINC00305Q7Z4B0 112 aa7.58□□□□□ -1.2
SDF2-208ENST00000589788 OR11H2Q8NH07 326 aa7.58□□□□□ -1.2
SDF2-208ENST00000589788 PFDN5Q99471 154 aa7.58□□□□□ -1.2
SDF2-208ENST00000589788 RPRMQ9NS64 109 aa7.58□□□□□ -1.2
SDF2-208ENST00000589788 H3BMM0 161 aa7.57□□□□□ -1.2
SDF2-208ENST00000589788 HLA-DRB4P13762 266 aa7.57□□□□□ -1.2
SDF2-208ENST00000589788 FAM74A1Q5RGS3 127 aa7.57□□□□□ -1.2
SDF2-208ENST00000589788 AKR1C8PQ5T2L2 129 aa7.57□□□□□ -1.2
SDF2-208ENST00000589788 EBLN2Q6P2I7 272 aa7.57□□□□□ -1.2
SDF2-208ENST00000589788 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.57□□□□□ -1.2
SDF2-208ENST00000589788 DPPA3Q6W0C5 159 aa7.57□□□□□ -1.2
SDF2-208ENST00000589788 FOXI2Q6ZQN5 318 aa7.57□□□□□ -1.2
SDF2-208ENST00000589788 OR1L4Q8NGR5 311 aa7.57□□□□□ -1.2
SDF2-208ENST00000589788 LRRC20Q8TCA0 184 aa7.57□□□□□ -1.2
SDF2-208ENST00000589788 C1QTNF4Q9BXJ3 329 aa7.57□□□□□ -1.2
SDF2-208ENST00000589788 SAV1Q9H4B6 383 aaPredicted RBP7.57□□□□□ -1.2
SDF2-208ENST00000589788 DNAJC4Q9NNZ3 241 aa7.57□□□□□ -1.2
SDF2-208ENST00000589788 HLA-DRB4X5D2U9 266 aa7.57□□□□□ -1.2
SDF2-208ENST00000589788 IGKV3-20P01619 116 aa7.56□□□□□ -1.2
SDF2-208ENST00000589788 RAB2AP61019 212 aa7.56□□□□□ -1.2
SDF2-208ENST00000589788 GCSAMLQ5JQS6 135 aa7.56□□□□□ -1.2
SDF2-208ENST00000589788 SPATA31B1PQ5VZV4 182 aa7.56□□□□□ -1.2
SDF2-208ENST00000589788 BPIFA4PQ86YQ2 179 aa7.56□□□□□ -1.2
SDF2-208ENST00000589788 OR4B1Q8NGF8 309 aa7.56□□□□□ -1.2
SDF2-208ENST00000589788 OR10G4Q8NGN3 311 aa7.56□□□□□ -1.2
SDF2-208ENST00000589788 OR10G9Q8NGN4 311 aa7.56□□□□□ -1.2
SDF2-208ENST00000589788 OR10G7Q8NGN6 311 aa7.56□□□□□ -1.2
SDF2-208ENST00000589788 A0A087X0K7 114 aa7.55□□□□□ -1.2
SDF2-208ENST00000589788 GIG44P09565 113 aaPredicted RBP7.55□□□□□ -1.2
SDF2-208ENST00000589788 DEFB1P60022 68 aa7.55□□□□□ -1.2
SDF2-208ENST00000589788 RHOBP62745 196 aa7.55□□□□□ -1.2
SDF2-208ENST00000589788 GDF5OSQ5U4N7 250 aa7.55□□□□□ -1.2
SDF2-208ENST00000589788 IGFL4Q6B9Z1 124 aa7.55□□□□□ -1.2
SDF2-208ENST00000589788 RPP25LQ8N5L8 163 aaKnown RBP7.55□□□□□ -1.2
SDF2-208ENST00000589788 TMEM37Q8WXS4 190 aa7.55□□□□□ -1.2
SDF2-208ENST00000589788 C20orf173Q96LM9 149 aa7.55□□□□□ -1.2
SDF2-208ENST00000589788 NEU1Q99519 415 aa7.55□□□□□ -1.2
SDF2-208ENST00000589788 MRPL32Q9BYC8 188 aaKnown RBP7.55□□□□□ -1.2
SDF2-208ENST00000589788 CLEC5AQ9NY25 188 aa7.55□□□□□ -1.2
SDF2-208ENST00000589788 XCL2Q9UBD3 114 aa7.55□□□□□ -1.2
SDF2-208ENST00000589788 A0A087WWL8 130 aa7.54□□□□□ -1.2
SDF2-208ENST00000589788 A0A0J9YX75 114 aa7.54□□□□□ -1.2
SDF2-208ENST00000589788 CTXND1A0A1B0GTU2 59 aa7.54□□□□□ -1.2
SDF2-208ENST00000589788 CXorf65A6NEN9 183 aa7.54□□□□□ -1.2
SDF2-208ENST00000589788 F6UB75 175 aa7.54□□□□□ -1.2
SDF2-208ENST00000589788 CDC34P49427 236 aaPredicted RBP7.54□□□□□ -1.2
SDF2-208ENST00000589788 FHITP49789 147 aa7.54□□□□□ -1.2
SDF2-208ENST00000589788 PTTG1IPP53801 180 aa7.54□□□□□ -1.2
SDF2-208ENST00000589788 PMS2P11Q13670 270 aa7.54□□□□□ -1.2
SDF2-208ENST00000589788 FAM78BQ5VT40 261 aa7.54□□□□□ -1.2
SDF2-208ENST00000589788 MORN5Q5VZ52 161 aa7.54□□□□□ -1.2
SDF2-208ENST00000589788 FAM122CQ6P4D5 195 aa7.54□□□□□ -1.2
SDF2-208ENST00000589788 RNF182Q8N6D2 247 aa7.54□□□□□ -1.2
SDF2-208ENST00000589788 ZNF738Q8NE65 137 aa7.54□□□□□ -1.2
SDF2-208ENST00000589788 FAM213BQ8TBF2 198 aa7.54□□□□□ -1.2
SDF2-208ENST00000589788 SAT2Q96F10 170 aaPredicted RBP7.54□□□□□ -1.2
SDF2-208ENST00000589788 C17orf77Q96MU5 243 aa7.54□□□□□ -1.2
SDF2-208ENST00000589788 ACTR3CQ9C0K3 210 aaPredicted RBP7.54□□□□□ -1.2
SDF2-208ENST00000589788 FUT9Q9Y231 359 aa7.54□□□□□ -1.2
SDF2-208ENST00000589788 TRAV8-2A0A0B4J237 113 aa7.53□□□□□ -1.2
SDF2-208ENST00000589788 A0A1W2PPV4 95 aa7.53□□□□□ -1.2
SDF2-208ENST00000589788 ZNF705EA8MWA4 302 aaPredicted RBP7.53□□□□□ -1.2
SDF2-208ENST00000589788 DUSP14O95147 198 aaKnown RBP7.53□□□□□ -1.2
SDF2-208ENST00000589788 FXYD7P58549 80 aa7.53□□□□□ -1.2
SDF2-208ENST00000589788 BLOC1S1P78537 153 aa7.53□□□□□ -1.2
SDF2-208ENST00000589788 PSG9Q00887 426 aa7.53□□□□□ -1.2
SDF2-208ENST00000589788 ZNF726P1Q15940 193 aa7.53□□□□□ -1.2
SDF2-208ENST00000589788 LCN15Q6UWW0 184 aa7.53□□□□□ -1.2
SDF2-208ENST00000589788 SLC50A1Q9BRV3 221 aa7.53□□□□□ -1.2
SDF2-208ENST00000589788 C11orf68Q9H3H3 251 aaKnown RBP7.53□□□□□ -1.2
SDF2-208ENST00000589788 HUWE1Q7Z6Z7 4374 aaKnown RBP7.53□□□□□ -1.2
SDF2-208ENST00000589788 TRAV5A0A0B4J249 113 aa7.52□□□□□ -1.2
SDF2-208ENST00000589788 MRPS12O15235 138 aaKnown RBP7.52□□□□□ -1.2
SDF2-208ENST00000589788 DEFB4AO15263 64 aa7.52□□□□□ -1.2
SDF2-208ENST00000589788 NMBP08949 121 aa7.52□□□□□ -1.2
SDF2-208ENST00000589788 SNRPCP09234 159 aaKnown RBP7.52□□□□□ -1.2
SDF2-208ENST00000589788 STAG3L2P0CL84 134 aa7.52□□□□□ -1.2
SDF2-208ENST00000589788 STAG3L3P0CL85 134 aa7.52□□□□□ -1.2
SDF2-208ENST00000589788 MIFP14174 115 aa7.52□□□□□ -1.2
SDF2-208ENST00000589788 TAS2R45P59539 299 aa7.52□□□□□ -1.2
SDF2-208ENST00000589788 RAB14P61106 215 aa7.52□□□□□ -1.2
SDF2-208ENST00000589788 PSG3Q16557 428 aa7.52□□□□□ -1.2
SDF2-208ENST00000589788 GUK1Q16774 197 aa7.52□□□□□ -1.2
SDF2-208ENST00000589788 SSX7Q7RTT5 188 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms