RNA–Protein interactions for RNA: ENST00000588957.5

GFAP-215, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-215ENST00000588957 SLC17A3O00476 420 aa10.66□□□□□ -0.7
GFAP-215ENST00000588957 SLC25A5P05141 298 aaKnown RBP10.66□□□□□ -0.7
GFAP-215ENST00000588957 SNRPCP09234 159 aaKnown RBP10.66□□□□□ -0.7
GFAP-215ENST00000588957 SUMO1P63165 101 aaKnown RBP10.66□□□□□ -0.7
GFAP-215ENST00000588957 CST9LP1Q5W188 147 aa10.66□□□□□ -0.7
GFAP-215ENST00000588957 SSX7Q7RTT5 188 aa10.66□□□□□ -0.7
GFAP-215ENST00000588957 LYPD6BQ8NI32 183 aa10.66□□□□□ -0.7
GFAP-215ENST00000588957 HIST1H2BAQ96A08 127 aa10.66□□□□□ -0.7
GFAP-215ENST00000588957 LINC00477Q96M19 166 aa10.66□□□□□ -0.7
GFAP-215ENST00000588957 AURKAIP1Q9NWT8 199 aaPredicted RBP10.66□□□□□ -0.7
GFAP-215ENST00000588957 PPP1R14DQ9NXH3 145 aa10.66□□□□□ -0.7
GFAP-215ENST00000588957 LOC102724200A0A096LPH7 203 aaPredicted RBP10.65□□□□□ -0.7
GFAP-215ENST00000588957 KIR2DL5BA0A0G2JN68 375 aa10.65□□□□□ -0.7
GFAP-215ENST00000588957 KIR2DL5BA0A0G2JPC4 375 aa10.65□□□□□ -0.7
GFAP-215ENST00000588957 EIF3GO75821 320 aaKnown RBP eCLIP10.65□□□□□ -0.7
GFAP-215ENST00000588957 HLA-DRB4P13762 266 aa10.65□□□□□ -0.7
GFAP-215ENST00000588957 APOC4P55056 127 aa10.65□□□□□ -0.7
GFAP-215ENST00000588957 DEFB121Q5J5C9 76 aa10.65□□□□□ -0.7
GFAP-215ENST00000588957 ACTL10Q5JWF8 245 aa10.65□□□□□ -0.7
GFAP-215ENST00000588957 MORN3Q6PF18 240 aaPredicted RBP10.65□□□□□ -0.7
GFAP-215ENST00000588957 APRG1Q8IVJ8 170 aa10.65□□□□□ -0.7
GFAP-215ENST00000588957 KIR2DL5AQ8N109 375 aa10.65□□□□□ -0.7
GFAP-215ENST00000588957 EXOC3-AS1Q8N2X6 119 aa10.65□□□□□ -0.7
GFAP-215ENST00000588957 FAM24BQ8N5W8 94 aa10.65□□□□□ -0.7
GFAP-215ENST00000588957 DEFB125Q8N687 156 aa10.65□□□□□ -0.7
GFAP-215ENST00000588957 OR8A1Q8NGG7 326 aa10.65□□□□□ -0.7
GFAP-215ENST00000588957 KIR2DL5BQ8NHK3 375 aa10.65□□□□□ -0.7
GFAP-215ENST00000588957 TMPRSS5Q9H3S3 457 aa10.65□□□□□ -0.7
GFAP-215ENST00000588957 SRD5A3Q9H8P0 318 aa10.65□□□□□ -0.7
GFAP-215ENST00000588957 HLA-DRB4X5D2U9 266 aa10.65□□□□□ -0.7
GFAP-215ENST00000588957 A0A0J9YX75 114 aa10.64□□□□□ -0.71
GFAP-215ENST00000588957 FAM74A7A6NL05 159 aa10.64□□□□□ -0.71
GFAP-215ENST00000588957 UBE2CO00762 179 aa10.64□□□□□ -0.71
GFAP-215ENST00000588957 AMBPP02760 352 aa10.64□□□□□ -0.71
GFAP-215ENST00000588957 IGHV4-30-4P0DP06 118 aa10.64□□□□□ -0.71
GFAP-215ENST00000588957 TSPOP30536 169 aa10.64□□□□□ -0.71
GFAP-215ENST00000588957 RNF182Q8N6D2 247 aa10.64□□□□□ -0.71
GFAP-215ENST00000588957 C1QTNF4Q9BXJ3 329 aa10.64□□□□□ -0.71
GFAP-215ENST00000588957 GNG13Q9P2W3 67 aa10.64□□□□□ -0.71
GFAP-215ENST00000588957 TRBV7-9A0A0J9YWB2 115 aa10.63□□□□□ -0.71
GFAP-215ENST00000588957 A0A1B0GV50 99 aa10.63□□□□□ -0.71
GFAP-215ENST00000588957 H3BMM0 161 aa10.63□□□□□ -0.71
GFAP-215ENST00000588957 PAGE4O60829 102 aa10.63□□□□□ -0.71
GFAP-215ENST00000588957 NDUFS6O75380 124 aaKnown RBP10.63□□□□□ -0.71
GFAP-215ENST00000588957 S100A9P06702 114 aaKnown RBP10.63□□□□□ -0.71
GFAP-215ENST00000588957 UBE2G2P60604 165 aa10.63□□□□□ -0.71
GFAP-215ENST00000588957 TMEM78Q5T7P6 136 aa10.63□□□□□ -0.71
GFAP-215ENST00000588957 IGFL4Q6B9Z1 124 aa10.63□□□□□ -0.71
GFAP-215ENST00000588957 OR4B1Q8NGF8 309 aa10.63□□□□□ -0.71
GFAP-215ENST00000588957 C20orf173Q96LM9 149 aa10.63□□□□□ -0.71
GFAP-215ENST00000588957 VAX2Q9UIW0 290 aa10.63□□□□□ -0.71
GFAP-215ENST00000588957 EPDR1Q9UM22 224 aa10.63□□□□□ -0.71
GFAP-215ENST00000588957 DIRC3C9JPN6 131 aa10.62□□□□□ -0.71
GFAP-215ENST00000588957 M0R3E3 92 aa10.62□□□□□ -0.71
GFAP-215ENST00000588957 PDE6DO43924 150 aa10.62□□□□□ -0.71
GFAP-215ENST00000588957 HIST1H1AQ02539 215 aaPredicted RBP10.62□□□□□ -0.71
GFAP-215ENST00000588957 C9orf47Q6ZRZ4 202 aa10.62□□□□□ -0.71
GFAP-215ENST00000588957 MRAPQ8TCY5 172 aa10.62□□□□□ -0.71
GFAP-215ENST00000588957 ODF3Q96PU9 254 aa10.62□□□□□ -0.71
GFAP-215ENST00000588957 ATG101Q9BSB4 218 aa10.62□□□□□ -0.71
GFAP-215ENST00000588957 CSTL1Q9H114 145 aa10.62□□□□□ -0.71
GFAP-215ENST00000588957 SMDT1Q9H4I9 107 aa10.62□□□□□ -0.71
GFAP-215ENST00000588957 LENEPQ9Y5L5 61 aa10.62□□□□□ -0.71
GFAP-215ENST00000588957 NBEAL1Q6ZS30 2694 aa10.62□□□□□ -0.71
GFAP-215ENST00000588957 PKD1L1Q8TDX9 2849 aa10.62□□□□□ -0.71
GFAP-215ENST00000588957 ZNF705FA8MVS1 300 aaPredicted RBP10.61□□□□□ -0.71
GFAP-215ENST00000588957 C11orf94C9JXX5 98 aa10.61□□□□□ -0.71
GFAP-215ENST00000588957 TCRAP04437 139 aa10.61□□□□□ -0.71
GFAP-215ENST00000588957 NMBP08949 121 aa10.61□□□□□ -0.71
GFAP-215ENST00000588957 BCL2P10415 239 aa10.61□□□□□ -0.71
GFAP-215ENST00000588957 CNN1P51911 297 aaKnown RBP10.61□□□□□ -0.71
GFAP-215ENST00000588957 DEFA6Q01524 100 aa10.61□□□□□ -0.71
GFAP-215ENST00000588957 TRPT1Q86TN4 253 aaKnown RBP10.61□□□□□ -0.71
GFAP-215ENST00000588957 CYB561D1Q8N8Q1 229 aa10.61□□□□□ -0.71
GFAP-215ENST00000588957 NDFIP1Q9BT67 221 aa10.61□□□□□ -0.71
GFAP-215ENST00000588957 YTHDF2Q9Y5A9 579 aaKnown RBP10.61□□□□□ -0.71
GFAP-215ENST00000588957 RBFOX3A6NFN3 312 aa10.6□□□□□ -0.71
GFAP-215ENST00000588957 KNCNA6PVL3 124 aa10.6□□□□□ -0.71
GFAP-215ENST00000588957 GGTLC3B5MD39 225 aa10.6□□□□□ -0.71
GFAP-215ENST00000588957 NPIPB6E9PJ23 425 aa10.6□□□□□ -0.71
GFAP-215ENST00000588957 K7EIL1 84 aa10.6□□□□□ -0.71
GFAP-215ENST00000588957 HLA-DMBP28068 263 aa10.6□□□□□ -0.71
GFAP-215ENST00000588957 CCL20P78556 96 aa10.6□□□□□ -0.71
GFAP-215ENST00000588957 MEF2BQ02080 365 aaPredicted RBP10.6□□□□□ -0.71
GFAP-215ENST00000588957 CLLU1Q5K131 121 aa10.6□□□□□ -0.71
GFAP-215ENST00000588957 CCDC28AQ8IWP9 274 aa10.6□□□□□ -0.71
GFAP-215ENST00000588957 A8MTW9 85 aa10.59□□□□□ -0.71
GFAP-215ENST00000588957 LEPP41159 167 aa10.59□□□□□ -0.71
GFAP-215ENST00000588957 ZNF138P52744 262 aa10.59□□□□□ -0.71
GFAP-215ENST00000588957 SAPCD1Q5SSQ6 148 aa10.59□□□□□ -0.71
GFAP-215ENST00000588957 GOLT1AQ6ZVE7 132 aa10.59□□□□□ -0.71
GFAP-215ENST00000588957 EIF5A2Q9GZV4 153 aaKnown RBP10.59□□□□□ -0.71
GFAP-215ENST00000588957 NOTCH1P46531 2555 aa10.58□□□□□ -0.72
GFAP-215ENST00000588957 F6UB75 175 aa10.58□□□□□ -0.72
GFAP-215ENST00000588957 PEX7O00628 323 aa10.58□□□□□ -0.72
GFAP-215ENST00000588957 FRMD6-AS1P0C7T7 363 aa10.58□□□□□ -0.72
GFAP-215ENST00000588957 RPL35AP18077 110 aaKnown RBP10.58□□□□□ -0.72
GFAP-215ENST00000588957 CDKN1BP46527 198 aa10.58□□□□□ -0.72
GFAP-215ENST00000588957 UBE2G1P62253 170 aa10.58□□□□□ -0.72
GFAP-215ENST00000588957 PEA15Q15121 130 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms