RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 PGPEP1Q9NXJ5 209 aa9.65□□□□□ -0.86
VMP1-209ENST00000588915 PRAC2D3DTV9 90 aa9.64□□□□□ -0.87
VMP1-209ENST00000588915 COX7A2P2O60397 106 aa9.64□□□□□ -0.87
VMP1-209ENST00000588915 NDUFB6O95139 128 aa9.64□□□□□ -0.87
VMP1-209ENST00000588915 CT45A10P0DMU9 189 aa9.64□□□□□ -0.87
VMP1-209ENST00000588915 IGLC2P0DOY2 106 aa9.64□□□□□ -0.87
VMP1-209ENST00000588915 ZBTB8BQ8NAP8 495 aaPredicted RBP9.64□□□□□ -0.87
VMP1-209ENST00000588915 ZNF431Q8TF32 576 aaPredicted RBP9.64□□□□□ -0.87
VMP1-209ENST00000588915 TMEM37Q8WXS4 190 aa9.64□□□□□ -0.87
VMP1-209ENST00000588915 ZNF586Q9NXT0 402 aa9.64□□□□□ -0.87
VMP1-209ENST00000588915 NPIPB6E9PJ23 425 aa9.63□□□□□ -0.87
VMP1-209ENST00000588915 ZNF253O75346 499 aa9.63□□□□□ -0.87
VMP1-209ENST00000588915 OR4E1P0C645 316 aa9.63□□□□□ -0.87
VMP1-209ENST00000588915 RAB31Q13636 194 aa9.63□□□□□ -0.87
VMP1-209ENST00000588915 C10orf113Q5VZT2 155 aa9.63□□□□□ -0.87
VMP1-209ENST00000588915 Q6ZRG5 221 aa9.63□□□□□ -0.87
VMP1-209ENST00000588915 ZNF680Q8NEM1 530 aa9.63□□□□□ -0.87
VMP1-209ENST00000588915 LINC00467Q9BRT7 94 aa9.63□□□□□ -0.87
VMP1-209ENST00000588915 PARD6GQ9BYG4 376 aaPredicted RBP9.63□□□□□ -0.87
VMP1-209ENST00000588915 DNAJC4Q9NNZ3 241 aa9.63□□□□□ -0.87
VMP1-209ENST00000588915 A0A096LPF7 62 aa9.62□□□□□ -0.87
VMP1-209ENST00000588915 TRAV12-3A0A0B4J271 114 aa9.62□□□□□ -0.87
VMP1-209ENST00000588915 SLC17A3O00476 420 aa9.62□□□□□ -0.87
VMP1-209ENST00000588915 SIVA1O15304 175 aa9.62□□□□□ -0.87
VMP1-209ENST00000588915 SLC25A5P05141 298 aaKnown RBP9.62□□□□□ -0.87
VMP1-209ENST00000588915 PRB4P10163 310 aaPredicted RBP9.62□□□□□ -0.87
VMP1-209ENST00000588915 ARL16Q0P5N6 197 aa9.62□□□□□ -0.87
VMP1-209ENST00000588915 OPCMLQ14982 345 aa9.62□□□□□ -0.87
VMP1-209ENST00000588915 IAH1Q2TAA2 248 aaPredicted RBP9.62□□□□□ -0.87
VMP1-209ENST00000588915 CNPY1Q3B7I2 92 aa9.62□□□□□ -0.87
VMP1-209ENST00000588915 Q6ZRN7 208 aaPredicted RBP9.62□□□□□ -0.87
VMP1-209ENST00000588915 Q6ZTI0 123 aa9.62□□□□□ -0.87
VMP1-209ENST00000588915 MRPL53Q96EL3 112 aaKnown RBP9.62□□□□□ -0.87
VMP1-209ENST00000588915 VSIG2Q96IQ7 327 aa9.62□□□□□ -0.87
VMP1-209ENST00000588915 MGST2Q99735 147 aa9.62□□□□□ -0.87
VMP1-209ENST00000588915 TMPRSS5Q9H3S3 457 aa9.62□□□□□ -0.87
VMP1-209ENST00000588915 PTTG2Q9NZH5 202 aa9.62□□□□□ -0.87
VMP1-209ENST00000588915 TRGV2A0A075B6R0 118 aa9.61□□□□□ -0.87
VMP1-209ENST00000588915 C7orf66A4D0T2 115 aa9.61□□□□□ -0.87
VMP1-209ENST00000588915 EPM2AB3EWF7 344 aa9.61□□□□□ -0.87
VMP1-209ENST00000588915 H3BQ15 152 aa9.61□□□□□ -0.87
VMP1-209ENST00000588915 EREGO14944 169 aa9.61□□□□□ -0.87
VMP1-209ENST00000588915 SNRPCP09234 159 aaKnown RBP9.61□□□□□ -0.87
VMP1-209ENST00000588915 CAMLGP49069 296 aa9.61□□□□□ -0.87
VMP1-209ENST00000588915 LINC00315P59091 139 aa9.61□□□□□ -0.87
VMP1-209ENST00000588915 ANXA2RQ3ZCQ2 193 aa9.61□□□□□ -0.87
VMP1-209ENST00000588915 CDPF1Q6NVV7 123 aa9.61□□□□□ -0.87
VMP1-209ENST00000588915 C12orf45Q8N5I9 185 aaPredicted RBP9.61□□□□□ -0.87
VMP1-209ENST00000588915 OR1L4Q8NGR5 311 aa9.61□□□□□ -0.87
VMP1-209ENST00000588915 LINC00477Q96M19 166 aa9.61□□□□□ -0.87
VMP1-209ENST00000588915 PFDN5Q99471 154 aa9.61□□□□□ -0.87
VMP1-209ENST00000588915 RCL1Q9Y2P8 373 aaKnown RBP9.61□□□□□ -0.87
VMP1-209ENST00000588915 H3BTX0 84 aa9.6□□□□□ -0.87
VMP1-209ENST00000588915 SCGB1D2O95969 90 aa9.6□□□□□ -0.87
VMP1-209ENST00000588915 INPP1P49441 399 aa9.6□□□□□ -0.87
VMP1-209ENST00000588915 SLAQ13239 276 aa9.6□□□□□ -0.87
VMP1-209ENST00000588915 SPANXN2Q5MJ10 180 aa9.6□□□□□ -0.87
VMP1-209ENST00000588915 MORN5Q5VZ52 161 aa9.6□□□□□ -0.87
VMP1-209ENST00000588915 EIF4E3Q8N5X7 224 aaKnown RBP9.6□□□□□ -0.87
VMP1-209ENST00000588915 MITD1Q8WV92 249 aa9.6□□□□□ -0.87
VMP1-209ENST00000588915 SRRQ9GZT4 340 aa9.6□□□□□ -0.87
VMP1-209ENST00000588915 GSKIPQ9P0R6 139 aa9.6□□□□□ -0.87
VMP1-209ENST00000588915 FLVCR2Q9UPI3 526 aa9.6□□□□□ -0.87
VMP1-209ENST00000588915 PRELID1Q9Y255 219 aa9.6□□□□□ -0.87
VMP1-209ENST00000588915 HERC1Q15751 4861 aa9.59□□□□□ -0.87
VMP1-209ENST00000588915 LINC00854A0A1B0GVQ3 168 aa9.59□□□□□ -0.87
VMP1-209ENST00000588915 C7orf71A4D174 169 aa9.59□□□□□ -0.87
VMP1-209ENST00000588915 KLLNB2CW77 178 aa9.59□□□□□ -0.87
VMP1-209ENST00000588915 ZNF324O75467 553 aaPredicted RBP9.59□□□□□ -0.87
VMP1-209ENST00000588915 MBPP02686 304 aaPredicted RBP9.59□□□□□ -0.87
VMP1-209ENST00000588915 NMBP08949 121 aa9.59□□□□□ -0.87
VMP1-209ENST00000588915 NRARPQ7Z6K4 114 aa9.59□□□□□ -0.87
VMP1-209ENST00000588915 NFE4Q86UQ8 179 aa9.59□□□□□ -0.87
VMP1-209ENST00000588915 C11orf72Q8NBR9 251 aa9.59□□□□□ -0.87
VMP1-209ENST00000588915 GSN-AS1Q9NRJ2 163 aa9.59□□□□□ -0.87
VMP1-209ENST00000588915 FUT9Q9Y231 359 aa9.59□□□□□ -0.87
VMP1-209ENST00000588915 CENPXA8MT69 81 aa9.58□□□□□ -0.88
VMP1-209ENST00000588915 J3KRW8 73 aa9.58□□□□□ -0.88
VMP1-209ENST00000588915 K7EP13 123 aa9.58□□□□□ -0.88
VMP1-209ENST00000588915 L7N2F9 121 aa9.58□□□□□ -0.88
VMP1-209ENST00000588915 SPINK4O60575 86 aa9.58□□□□□ -0.88
VMP1-209ENST00000588915 RPL29P47914 159 aaKnown RBP9.58□□□□□ -0.88
VMP1-209ENST00000588915 ERVFC1-1P60608 527 aa9.58□□□□□ -0.88
VMP1-209ENST00000588915 VAMP2P63027 116 aa9.58□□□□□ -0.88
VMP1-209ENST00000588915 PDE6HQ13956 83 aa9.58□□□□□ -0.88
VMP1-209ENST00000588915 IBA57Q5T440 356 aaKnown RBP9.58□□□□□ -0.88
VMP1-209ENST00000588915 TRIQKQ629K1 86 aa9.58□□□□□ -0.88
VMP1-209ENST00000588915 LYPD1Q8N2G4 141 aa9.58□□□□□ -0.88
VMP1-209ENST00000588915 CHAC2Q8WUX2 184 aa9.58□□□□□ -0.88
VMP1-209ENST00000588915 FAM19A4Q96LR4 140 aa9.58□□□□□ -0.88
VMP1-209ENST00000588915 ICOSQ9Y6W8 199 aa9.58□□□□□ -0.88
VMP1-209ENST00000588915 TRBV19A0A075B6N1 114 aa9.57□□□□□ -0.88
VMP1-209ENST00000588915 TRAV9-2A0A087WT02 112 aa9.57□□□□□ -0.88
VMP1-209ENST00000588915 TRGV1A0A0A0MS02 117 aa9.57□□□□□ -0.88
VMP1-209ENST00000588915 MPDU1O75352 247 aa9.57□□□□□ -0.88
VMP1-209ENST00000588915 TCL1AP56279 114 aa9.57□□□□□ -0.88
VMP1-209ENST00000588915 BAK1Q16611 211 aa9.57□□□□□ -0.88
VMP1-209ENST00000588915 ST6GAL2Q96JF0 529 aa9.57□□□□□ -0.88
VMP1-209ENST00000588915 C20orf85Q9H1P6 137 aa9.57□□□□□ -0.88
VMP1-209ENST00000588915 TMEM14CQ9P0S9 112 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms