RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 FAM19A2Q8N3H0 131 aa11.08□□□□□ -0.64
NEDD4L-223ENST00000588516 ZNF469Q96JG9 3925 aaPredicted RBP11.07□□□□□ -0.64
NEDD4L-223ENST00000588516 IGLV11-55A0A075B6I3 123 aa11.07□□□□□ -0.64
NEDD4L-223ENST00000588516 CRXO43186 299 aaPredicted RBP11.07□□□□□ -0.64
NEDD4L-223ENST00000588516 APELAP0DMC3 54 aa11.07□□□□□ -0.64
NEDD4L-223ENST00000588516 PET117Q6UWS5 81 aa11.07□□□□□ -0.64
NEDD4L-223ENST00000588516 SIGLEC15Q6ZMC9 328 aa11.07□□□□□ -0.64
NEDD4L-223ENST00000588516 Q6ZN92 141 aa11.07□□□□□ -0.64
NEDD4L-223ENST00000588516 PRIMA1Q86XR5 153 aa11.07□□□□□ -0.64
NEDD4L-223ENST00000588516 GTSF1Q8WW33 167 aa11.07□□□□□ -0.64
NEDD4L-223ENST00000588516 ZNF414Q96IQ9 312 aa11.07□□□□□ -0.64
NEDD4L-223ENST00000588516 MAP1LC3CQ9BXW4 147 aa11.07□□□□□ -0.64
NEDD4L-223ENST00000588516 KRTAP3-3Q9BYR6 98 aa11.07□□□□□ -0.64
NEDD4L-223ENST00000588516 KRTAP3-2Q9BYR7 98 aa11.07□□□□□ -0.64
NEDD4L-223ENST00000588516 ST20Q9HBF5 79 aa11.07□□□□□ -0.64
NEDD4L-223ENST00000588516 C21orf62Q9NYP8 219 aa11.07□□□□□ -0.64
NEDD4L-223ENST00000588516 AKAP6Q13023 2319 aa11.07□□□□□ -0.64
NEDD4L-223ENST00000588516 NDUFB8O95169 186 aa11.06□□□□□ -0.64
NEDD4L-223ENST00000588516 LEPROTL1O95214 131 aa11.06□□□□□ -0.64
NEDD4L-223ENST00000588516 IGLV2-11P01706 119 aa11.06□□□□□ -0.64
NEDD4L-223ENST00000588516 FAM106CPP0CH98 169 aa11.06□□□□□ -0.64
NEDD4L-223ENST00000588516 BMI1P35226 326 aa11.06□□□□□ -0.64
NEDD4L-223ENST00000588516 SRSF2Q01130 221 aaKnown RBP11.06□□□□□ -0.64
NEDD4L-223ENST00000588516 TDRG1Q3Y452 100 aa11.06□□□□□ -0.64
NEDD4L-223ENST00000588516 Q56UQ5 140 aa11.06□□□□□ -0.64
NEDD4L-223ENST00000588516 LEMD1Q68G75 181 aa11.06□□□□□ -0.64
NEDD4L-223ENST00000588516 COX8CQ7Z4L0 72 aa11.06□□□□□ -0.64
NEDD4L-223ENST00000588516 SMR3AQ99954 134 aa11.06□□□□□ -0.64
NEDD4L-223ENST00000588516 SSBP4Q9BWG4 385 aaPredicted RBP11.06□□□□□ -0.64
NEDD4L-223ENST00000588516 C11orf71Q6IPW1 123 aa11.05□□□□□ -0.64
NEDD4L-223ENST00000588516 DTX2Q86UW9 622 aa11.05□□□□□ -0.64
NEDD4L-223ENST00000588516 EXOC3-AS1Q8N2X6 119 aa11.05□□□□□ -0.64
NEDD4L-223ENST00000588516 RABAC1Q9UI14 185 aa11.05□□□□□ -0.64
NEDD4L-223ENST00000588516 HILPDAQ9Y5L2 63 aa11.05□□□□□ -0.64
NEDD4L-223ENST00000588516 C2orf70A6NJV1 201 aa11.04□□□□□ -0.64
NEDD4L-223ENST00000588516 SH2D7A6NKC9 451 aaPredicted RBP11.04□□□□□ -0.64
NEDD4L-223ENST00000588516 ZNF25P17030 456 aaPredicted RBP11.04□□□□□ -0.64
NEDD4L-223ENST00000588516 RUSC1-AS1Q66K80 236 aa11.04□□□□□ -0.64
NEDD4L-223ENST00000588516 LINC00322Q6ZN03 302 aaPredicted RBP11.04□□□□□ -0.64
NEDD4L-223ENST00000588516 VMO1Q7Z5L0 202 aa11.04□□□□□ -0.64
NEDD4L-223ENST00000588516 Q8N6K4 173 aa11.04□□□□□ -0.64
NEDD4L-223ENST00000588516 SGK494Q96LW2 274 aa11.04□□□□□ -0.64
NEDD4L-223ENST00000588516 MS4A6AQ9H2W1 248 aa11.04□□□□□ -0.64
NEDD4L-223ENST00000588516 LAMTOR2Q9Y2Q5 125 aa11.04□□□□□ -0.64
NEDD4L-223ENST00000588516 MAP1AP78559 2803 aaPredicted RBP11.04□□□□□ -0.64
NEDD4L-223ENST00000588516 TMEM189A5PLL7 270 aa11.03□□□□□ -0.64
NEDD4L-223ENST00000588516 NCBP2LA6PVI3 153 aaKnown RBP11.03□□□□□ -0.64
NEDD4L-223ENST00000588516 VWC2LB2RUY7 222 aa11.03□□□□□ -0.64
NEDD4L-223ENST00000588516 MRPS12O15235 138 aaKnown RBP11.03□□□□□ -0.64
NEDD4L-223ENST00000588516 TMEM11P17152 192 aa11.03□□□□□ -0.64
NEDD4L-223ENST00000588516 KLK9Q2XQG4 91 aa11.03□□□□□ -0.64
NEDD4L-223ENST00000588516 PSMG4Q5JS54 123 aa11.03□□□□□ -0.64
NEDD4L-223ENST00000588516 ZNF493Q6ZR52 646 aa11.03□□□□□ -0.64
NEDD4L-223ENST00000588516 PMCHL2Q9BQD1 86 aa11.03□□□□□ -0.64
NEDD4L-223ENST00000588516 LPAR2Q9HBW0 351 aa11.03□□□□□ -0.64
NEDD4L-223ENST00000588516 KLK9Q9UKQ9 250 aa11.03□□□□□ -0.64
NEDD4L-223ENST00000588516 H3BTX0 84 aa11.02□□□□□ -0.65
NEDD4L-223ENST00000588516 SYS1-DBNDD2H3BUS1 97 aa11.02□□□□□ -0.65
NEDD4L-223ENST00000588516 SIAH2O43255 324 aa11.02□□□□□ -0.65
NEDD4L-223ENST00000588516 DLEU1O43261 78 aa11.02□□□□□ -0.65
NEDD4L-223ENST00000588516 APOHP02749 345 aaPredicted RBP11.02□□□□□ -0.65
NEDD4L-223ENST00000588516 ZNF124Q15973 351 aa11.02□□□□□ -0.65
NEDD4L-223ENST00000588516 EBLN2Q6P2I7 272 aa11.02□□□□□ -0.65
NEDD4L-223ENST00000588516 FA2HQ7L5A8 372 aa11.02□□□□□ -0.65
NEDD4L-223ENST00000588516 ZC2HC1AQ96GY0 325 aa11.02□□□□□ -0.65
NEDD4L-223ENST00000588516 FANCD2OSQ96PS1 177 aa11.02□□□□□ -0.65
NEDD4L-223ENST00000588516 ATP6V0BQ99437 205 aa11.02□□□□□ -0.65
NEDD4L-223ENST00000588516 CLEC5AQ9NY25 188 aa11.02□□□□□ -0.65
NEDD4L-223ENST00000588516 FLNAP21333 2647 aaKnown RBP11.01□□□□□ -0.65
NEDD4L-223ENST00000588516 IGHV1-24A0A0C4DH33 117 aa11.01□□□□□ -0.65
NEDD4L-223ENST00000588516 TSPOP30536 169 aa11.01□□□□□ -0.65
NEDD4L-223ENST00000588516 FAM110DQ8TAY7 271 aaPredicted RBP11.01□□□□□ -0.65
NEDD4L-223ENST00000588516 GOLT1BQ9Y3E0 138 aa11.01□□□□□ -0.65
NEDD4L-223ENST00000588516 RNF114Q9Y508 228 aa11.01□□□□□ -0.65
NEDD4L-223ENST00000588516 FN1P02751 2386 aaKnown RBP11□□□□□ -0.65
NEDD4L-223ENST00000588516 TRAV8-1A0A0A6YYK1 113 aa11□□□□□ -0.65
NEDD4L-223ENST00000588516 OR4C46A6NHA9 309 aa11□□□□□ -0.65
NEDD4L-223ENST00000588516 GOSR1O95249 250 aa11□□□□□ -0.65
NEDD4L-223ENST00000588516 UBE2E1P51965 193 aa11□□□□□ -0.65
NEDD4L-223ENST00000588516 BATFQ16520 125 aa11□□□□□ -0.65
NEDD4L-223ENST00000588516 SPATA12Q7Z6I5 190 aa11□□□□□ -0.65
NEDD4L-223ENST00000588516 OR10AG1Q8NH19 301 aa11□□□□□ -0.65
NEDD4L-223ENST00000588516 PRSS3P2Q8NHM4 247 aa11□□□□□ -0.65
NEDD4L-223ENST00000588516 AP5S1Q9NUS5 200 aa11□□□□□ -0.65
NEDD4L-223ENST00000588516 RBAKDNA6NC62 111 aa10.99□□□□□ -0.65
NEDD4L-223ENST00000588516 A6NNC1 897 aa10.99□□□□□ -0.65
NEDD4L-223ENST00000588516 TOX4O94842 621 aa10.99□□□□□ -0.65
NEDD4L-223ENST00000588516 DLX1P56177 255 aa10.99□□□□□ -0.65
NEDD4L-223ENST00000588516 LHFPL4Q7Z7J7 247 aa10.99□□□□□ -0.65
NEDD4L-223ENST00000588516 ORAOV1Q8WV07 137 aa10.99□□□□□ -0.65
NEDD4L-223ENST00000588516 SLC50A1Q9BRV3 221 aa10.99□□□□□ -0.65
NEDD4L-223ENST00000588516 TMEM208Q9BTX3 173 aa10.99□□□□□ -0.65
NEDD4L-223ENST00000588516 COL6A5A8TX70 2615 aa10.99□□□□□ -0.65
NEDD4L-223ENST00000588516 A0A087X0K7 114 aa10.98□□□□□ -0.65
NEDD4L-223ENST00000588516 EFNA4P52798 201 aa10.98□□□□□ -0.65
NEDD4L-223ENST00000588516 RELQ04864 619 aaPredicted RBP10.98□□□□□ -0.65
NEDD4L-223ENST00000588516 LINC01559Q495D7 138 aa10.98□□□□□ -0.65
NEDD4L-223ENST00000588516 DPF1Q92782 380 aa10.98□□□□□ -0.65
NEDD4L-223ENST00000588516 HIF1ANQ9NWT6 349 aa10.98□□□□□ -0.65
NEDD4L-223ENST00000588516 PLXNB1O43157 2135 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms