RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 TRPT1Q86TN4 253 aaKnown RBP6.69□□□□□ -1.34
CIRBP-218ENST00000588344 OR8A1Q8NGG7 326 aa6.69□□□□□ -1.34
CIRBP-218ENST00000588344 ZNF503Q96F45 646 aa6.69□□□□□ -1.34
CIRBP-218ENST00000588344 C20orf173Q96LM9 149 aa6.69□□□□□ -1.34
CIRBP-218ENST00000588344 OTORQ9NRC9 128 aa6.69□□□□□ -1.34
CIRBP-218ENST00000588344 TP53TG1Q9Y2A0 90 aa6.69□□□□□ -1.34
CIRBP-218ENST00000588344 SERTM2A0A1B0GWG4 89 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 A0A1W2PRE2 83 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 MAP1LC3B2A6NCE7 125 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 SLC17A3O00476 420 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 HMGB3O15347 200 aaKnown RBP6.68□□□□□ -1.34
CIRBP-218ENST00000588344 HBE1P02100 147 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 AMBPP02760 352 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 SNRPCP09234 159 aaKnown RBP6.68□□□□□ -1.34
CIRBP-218ENST00000588344 H2AFB1P0C5Y9 115 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 RPL35AP18077 110 aaKnown RBP6.68□□□□□ -1.34
CIRBP-218ENST00000588344 SULT1A2P50226 295 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 ICAM4Q14773 271 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 ZNF726P1Q15940 193 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 IGFL4Q6B9Z1 124 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 SBSPONQ8IVN8 264 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 RNF182Q8N6D2 247 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 OR4B1Q8NGF8 309 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 CMTM2Q8TAZ6 248 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 FAM213BQ8TBF2 198 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 SFT2D1Q8WV19 159 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 LINC00477Q96M19 166 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 SPATA25Q9BR10 227 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 MAP1LC3BQ9GZQ8 125 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 Q9H3A6 140 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 PPP1R14DQ9NXH3 145 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 ARL2-SNX15V9GYD0 113 aa6.68□□□□□ -1.34
CIRBP-218ENST00000588344 TRAV1-1A0A0B4J248 108 aa6.67□□□□□ -1.34
CIRBP-218ENST00000588344 RBAKDNA6NC62 111 aa6.67□□□□□ -1.34
CIRBP-218ENST00000588344 PGPA6NDG6 321 aa6.67□□□□□ -1.34
CIRBP-218ENST00000588344 A8MTW9 85 aa6.67□□□□□ -1.34
CIRBP-218ENST00000588344 H3BTX0 84 aa6.67□□□□□ -1.34
CIRBP-218ENST00000588344 SLC25A5P05141 298 aaKnown RBP6.67□□□□□ -1.34
CIRBP-218ENST00000588344 TSPOP30536 169 aa6.67□□□□□ -1.34
CIRBP-218ENST00000588344 CNN1P51911 297 aaKnown RBP6.67□□□□□ -1.34
CIRBP-218ENST00000588344 NKX2-5P52952 324 aaPredicted RBP6.67□□□□□ -1.34
CIRBP-218ENST00000588344 ZNF124Q15973 351 aa6.67□□□□□ -1.34
CIRBP-218ENST00000588344 IQCF2Q8IXL9 164 aa6.67□□□□□ -1.34
CIRBP-218ENST00000588344 EXOC3-AS1Q8N2X6 119 aa6.67□□□□□ -1.34
CIRBP-218ENST00000588344 TM2D3Q9BRN9 247 aa6.67□□□□□ -1.34
CIRBP-218ENST00000588344 TCEAL7Q9BRU2 100 aa6.67□□□□□ -1.34
CIRBP-218ENST00000588344 TRBV7-9A0A0J9YWB2 115 aa6.66□□□□□ -1.34
CIRBP-218ENST00000588344 FBLL1A6NHQ2 334 aaKnown RBP6.66□□□□□ -1.34
CIRBP-218ENST00000588344 ZNF705FA8MVS1 300 aaPredicted RBP6.66□□□□□ -1.34
CIRBP-218ENST00000588344 K7EQM0 130 aa6.66□□□□□ -1.34
CIRBP-218ENST00000588344 CA1P00915 261 aaPredicted RBP6.66□□□□□ -1.34
CIRBP-218ENST00000588344 HLA-DMBP28068 263 aa6.66□□□□□ -1.34
CIRBP-218ENST00000588344 FHITP49789 147 aa6.66□□□□□ -1.34
CIRBP-218ENST00000588344 BLOC1S1P78537 153 aa6.66□□□□□ -1.34
CIRBP-218ENST00000588344 HIST1H1AQ02539 215 aaPredicted RBP6.66□□□□□ -1.34
CIRBP-218ENST00000588344 PMS2P11Q13670 270 aa6.66□□□□□ -1.34
CIRBP-218ENST00000588344 GDF5OSQ5U4N7 250 aa6.66□□□□□ -1.34
CIRBP-218ENST00000588344 RCHY1Q96PM5 261 aa6.66□□□□□ -1.34
CIRBP-218ENST00000588344 ODF3Q96PU9 254 aa6.66□□□□□ -1.34
CIRBP-218ENST00000588344 ASCL2Q99929 193 aa6.66□□□□□ -1.34
CIRBP-218ENST00000588344 PLA2G2EQ9NZK7 142 aa6.66□□□□□ -1.34
CIRBP-218ENST00000588344 ZNF705EA8MWA4 302 aaPredicted RBP6.65□□□□□ -1.34
CIRBP-218ENST00000588344 DIRC3C9JPN6 131 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 NPIPB6E9PJ23 425 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 F6UB75 175 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 F6UZH7 168 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 M0R3E3 92 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 SPRY2O43597 315 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 IGKV3-20P01619 116 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 NMBP08949 121 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 TAGLN2P37802 199 aaKnown RBP6.65□□□□□ -1.34
CIRBP-218ENST00000588344 FGF8P55075 233 aaPredicted RBP6.65□□□□□ -1.34
CIRBP-218ENST00000588344 SUMO1P63165 101 aaKnown RBP6.65□□□□□ -1.34
CIRBP-218ENST00000588344 TMEM78Q5T7P6 136 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 C9orf47Q6ZRZ4 202 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 SSX7Q7RTT5 188 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 C5orf17Q8NAS9 161 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 HIST1H2BAQ96A08 127 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 RNF183Q96D59 192 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 TXNDC17Q9BRA2 123 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 EPDR1Q9UM22 224 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 LENEPQ9Y5L5 61 aa6.65□□□□□ -1.34
CIRBP-218ENST00000588344 FAM74A7A6NL05 159 aa6.64□□□□□ -1.35
CIRBP-218ENST00000588344 PRAC2D3DTV9 90 aa6.64□□□□□ -1.35
CIRBP-218ENST00000588344 EIF3GO75821 320 aaKnown RBP eCLIP6.64□□□□□ -1.35
CIRBP-218ENST00000588344 IFNA1P01562 189 aa6.64□□□□□ -1.35
CIRBP-218ENST00000588344 IFNA7P01567 189 aa6.64□□□□□ -1.35
CIRBP-218ENST00000588344 LEPP41159 167 aa6.64□□□□□ -1.35
CIRBP-218ENST00000588344 CDKN1BP46527 198 aa6.64□□□□□ -1.35
CIRBP-218ENST00000588344 AMTNQ6UX39 209 aa6.64□□□□□ -1.35
CIRBP-218ENST00000588344 IGF2BP2-AS1Q96M15 143 aa6.64□□□□□ -1.35
CIRBP-218ENST00000588344 C20orf144Q9BQM9 153 aa6.64□□□□□ -1.35
CIRBP-218ENST00000588344 MANBALQ9NQG1 85 aa6.64□□□□□ -1.35
CIRBP-218ENST00000588344 BOLA1Q9Y3E2 137 aa6.64□□□□□ -1.35
CIRBP-218ENST00000588344 SMIM9A6NGZ8 99 aa6.63□□□□□ -1.35
CIRBP-218ENST00000588344 BOLA2-SMG1P6H3BVE0 249 aa6.63□□□□□ -1.35
CIRBP-218ENST00000588344 GIG44P09565 113 aaPredicted RBP6.63□□□□□ -1.35
CIRBP-218ENST00000588344 ZNF705DP0CH99 300 aaPredicted RBP6.63□□□□□ -1.35
CIRBP-218ENST00000588344 ZNF705BP0CI00 300 aaPredicted RBP6.63□□□□□ -1.35
CIRBP-218ENST00000588344 ZNF138P52744 262 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms