RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 TCRAP04437 139 aa8.48□□□□□ -1.05
VMP1-207ENST00000588131 RBPMS2Q6ZRY4 209 aaKnown RBP8.48□□□□□ -1.05
VMP1-207ENST00000588131 CMTM2Q8TAZ6 248 aa8.48□□□□□ -1.05
VMP1-207ENST00000588131 C2CD4CQ8TF44 421 aa8.48□□□□□ -1.05
VMP1-207ENST00000588131 LINC00479Q96M42 142 aa8.48□□□□□ -1.05
VMP1-207ENST00000588131 MDFIQ99750 246 aa8.48□□□□□ -1.05
VMP1-207ENST00000588131 PARLQ9H300 379 aa8.48□□□□□ -1.05
VMP1-207ENST00000588131 FBN1P35555 2871 aaKnown RBP8.47□□□□□ -1.05
VMP1-207ENST00000588131 DIRC3C9JPN6 131 aa8.47□□□□□ -1.05
VMP1-207ENST00000588131 F8W036 122 aa8.47□□□□□ -1.05
VMP1-207ENST00000588131 DNASE2O00115 360 aaPredicted RBP8.47□□□□□ -1.05
VMP1-207ENST00000588131 ISLRO14498 428 aa8.47□□□□□ -1.05
VMP1-207ENST00000588131 TSPAN4O14817 238 aa8.47□□□□□ -1.05
VMP1-207ENST00000588131 IGLV1-51P01701 117 aa8.47□□□□□ -1.05
VMP1-207ENST00000588131 DEFB1P60022 68 aa8.47□□□□□ -1.05
VMP1-207ENST00000588131 PSG3Q16557 428 aa8.47□□□□□ -1.05
VMP1-207ENST00000588131 ZNF674Q2M3X9 581 aa8.47□□□□□ -1.05
VMP1-207ENST00000588131 LCN12Q6JVE5 192 aa8.47□□□□□ -1.05
VMP1-207ENST00000588131 GOLT1AQ6ZVE7 132 aa8.47□□□□□ -1.05
VMP1-207ENST00000588131 HIST1H2BAQ96A08 127 aa8.47□□□□□ -1.05
VMP1-207ENST00000588131 MRPL53Q96EL3 112 aaKnown RBP8.47□□□□□ -1.05
VMP1-207ENST00000588131 TCEAL7Q9BRU2 100 aa8.47□□□□□ -1.05
VMP1-207ENST00000588131 ATG101Q9BSB4 218 aa8.47□□□□□ -1.05
VMP1-207ENST00000588131 PRELID1Q9Y255 219 aa8.47□□□□□ -1.05
VMP1-207ENST00000588131 IGKV2-40A0A087WW87 121 aaPredicted RBP8.46□□□□□ -1.06
VMP1-207ENST00000588131 TRAV34A0A0B4J273 112 aa8.46□□□□□ -1.06
VMP1-207ENST00000588131 TRAV25A0A0B4J276 109 aa8.46□□□□□ -1.06
VMP1-207ENST00000588131 KRBOX1C9JBD0 128 aa8.46□□□□□ -1.06
VMP1-207ENST00000588131 IGKV2D-40P01614 121 aaPredicted RBP8.46□□□□□ -1.06
VMP1-207ENST00000588131 ZNF688P0C7X2 276 aa8.46□□□□□ -1.06
VMP1-207ENST00000588131 AKR1C3P42330 323 aa8.46□□□□□ -1.06
VMP1-207ENST00000588131 RPL35P42766 123 aaKnown RBP8.46□□□□□ -1.06
VMP1-207ENST00000588131 CSN1S1P47710 185 aa8.46□□□□□ -1.06
VMP1-207ENST00000588131 SOHLH1Q5JUK2 328 aa8.46□□□□□ -1.06
VMP1-207ENST00000588131 C10orf91Q5T1B1 145 aa8.46□□□□□ -1.06
VMP1-207ENST00000588131 SGK494Q96LW2 274 aa8.46□□□□□ -1.06
VMP1-207ENST00000588131 SEC11CQ9BY50 192 aa8.46□□□□□ -1.06
VMP1-207ENST00000588131 TRBV20OR9-2A0A075B6H5 130 aa8.45□□□□□ -1.06
VMP1-207ENST00000588131 TRAV8-1A0A0A6YYK1 113 aa8.45□□□□□ -1.06
VMP1-207ENST00000588131 TRAV2A0A0B4J234 112 aa8.45□□□□□ -1.06
VMP1-207ENST00000588131 ZNF727A8MUV8 499 aa8.45□□□□□ -1.06
VMP1-207ENST00000588131 IGLV2-11P01706 119 aa8.45□□□□□ -1.06
VMP1-207ENST00000588131 CD33P20138 364 aa8.45□□□□□ -1.06
VMP1-207ENST00000588131 ID1P41134 155 aa8.45□□□□□ -1.06
VMP1-207ENST00000588131 CNN1P51911 297 aaKnown RBP8.45□□□□□ -1.06
VMP1-207ENST00000588131 PAFAH1B2P68402 229 aa8.45□□□□□ -1.06
VMP1-207ENST00000588131 SAMD13Q5VXD3 122 aa8.45□□□□□ -1.06
VMP1-207ENST00000588131 ZNF738Q8NE65 137 aa8.45□□□□□ -1.06
VMP1-207ENST00000588131 WFDC9Q8NEX5 89 aa8.45□□□□□ -1.06
VMP1-207ENST00000588131 IGF2BP2-AS1Q96M15 143 aa8.45□□□□□ -1.06
VMP1-207ENST00000588131 ASCL2Q99929 193 aa8.45□□□□□ -1.06
VMP1-207ENST00000588131 SPAG8Q99932 426 aaPredicted RBP8.45□□□□□ -1.06
VMP1-207ENST00000588131 SMIM7Q9BQ49 75 aa8.45□□□□□ -1.06
VMP1-207ENST00000588131 CLEC5AQ9NY25 188 aa8.45□□□□□ -1.06
VMP1-207ENST00000588131 ZNF256Q9Y2P7 627 aaPredicted RBP8.45□□□□□ -1.06
VMP1-207ENST00000588131 CARHSP1Q9Y2V2 147 aaKnown RBP8.45□□□□□ -1.06
VMP1-207ENST00000588131 TENM1Q9UKZ4 2725 aa8.45□□□□□ -1.06
VMP1-207ENST00000588131 PGPEP1LA6NFU8 196 aa8.44□□□□□ -1.06
VMP1-207ENST00000588131 F6UB75 175 aa8.44□□□□□ -1.06
VMP1-207ENST00000588131 ZNF705DP0CH99 300 aaPredicted RBP8.44□□□□□ -1.06
VMP1-207ENST00000588131 ZNF705BP0CI00 300 aaPredicted RBP8.44□□□□□ -1.06
VMP1-207ENST00000588131 GUCA2BQ16661 112 aa8.44□□□□□ -1.06
VMP1-207ENST00000588131 TMEM183BQ1AE95 376 aa8.44□□□□□ -1.06
VMP1-207ENST00000588131 CENPWQ5EE01 88 aa8.44□□□□□ -1.06
VMP1-207ENST00000588131 PSMG4Q5JS54 123 aa8.44□□□□□ -1.06
VMP1-207ENST00000588131 C9orf66Q5T8R8 295 aa8.44□□□□□ -1.06
VMP1-207ENST00000588131 ARL6IP6Q8N6S5 226 aa8.44□□□□□ -1.06
VMP1-207ENST00000588131 OR2K2Q8NGT1 345 aa8.44□□□□□ -1.06
VMP1-207ENST00000588131 VGLL1Q99990 258 aa8.44□□□□□ -1.06
VMP1-207ENST00000588131 KLF12Q9Y4X4 402 aa8.44□□□□□ -1.06
VMP1-207ENST00000588131 WNK1Q9H4A3 2382 aa8.43□□□□□ -1.06
VMP1-207ENST00000588131 ATRQ13535 2644 aa8.43□□□□□ -1.06
VMP1-207ENST00000588131 OR4C46A6NHA9 309 aa8.43□□□□□ -1.06
VMP1-207ENST00000588131 APOC3P02656 99 aa8.43□□□□□ -1.06
VMP1-207ENST00000588131 IGLL1P15814 213 aa8.43□□□□□ -1.06
VMP1-207ENST00000588131 TAS2R60P59551 318 aa8.43□□□□□ -1.06
VMP1-207ENST00000588131 UBE2G1P62253 170 aa8.43□□□□□ -1.06
VMP1-207ENST00000588131 SNRPD3P62318 126 aaKnown RBP8.43□□□□□ -1.06
VMP1-207ENST00000588131 ERCC8Q13216 396 aa8.43□□□□□ -1.06
VMP1-207ENST00000588131 FAM74A3Q4VXF1 159 aa8.43□□□□□ -1.06
VMP1-207ENST00000588131 PRNTQ86SH4 94 aa8.43□□□□□ -1.06
VMP1-207ENST00000588131 Q86TA4 180 aa8.43□□□□□ -1.06
VMP1-207ENST00000588131 TMEM75Q8N9X5 138 aa8.43□□□□□ -1.06
VMP1-207ENST00000588131 MAP6D1Q9H9H5 199 aa8.43□□□□□ -1.06
VMP1-207ENST00000588131 NAT8Q9UHE5 227 aa8.43□□□□□ -1.06
VMP1-207ENST00000588131 PSG8Q9UQ74 426 aa8.43□□□□□ -1.06
VMP1-207ENST00000588131 TRBV6-1A0A0K0K1D8 114 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 SERTM2A0A1B0GWG4 89 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 C9JCJ5 164 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 K7EQM0 130 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 IGLV2-8P01709 118 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 S100A1P23297 94 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 DEFB131AP59861 70 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 FLI1Q01543 452 aaPredicted RBP8.42□□□□□ -1.06
VMP1-207ENST00000588131 ZNF124Q15973 351 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 TMEM241Q24JQ0 296 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 GDF5OSQ5U4N7 250 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 NHLRC2Q8NBF2 726 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 OR8A1Q8NGG7 326 aa8.42□□□□□ -1.06
VMP1-207ENST00000588131 Q8TAT8 98 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms