RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 C1orf134Q5TEV5 83 aa10.05□□□□□ -0.8
VMP1-206ENST00000587945 GFI1BQ5VTD9 330 aa10.05□□□□□ -0.8
VMP1-206ENST00000587945 Q6ZRG5 221 aa10.05□□□□□ -0.8
VMP1-206ENST00000587945 RNASE8Q8TDE3 154 aaKnown RBP10.05□□□□□ -0.8
VMP1-206ENST00000587945 UQCC1Q9NVA1 299 aa10.05□□□□□ -0.8
VMP1-206ENST00000587945 WDR83OSQ9Y284 106 aa10.05□□□□□ -0.8
VMP1-206ENST00000587945 UBE2L5PA0A1B0GUS4 154 aa10.04□□□□□ -0.8
VMP1-206ENST00000587945 IGSF23A1L1A6 192 aa10.04□□□□□ -0.8
VMP1-206ENST00000587945 CT45A10P0DMU9 189 aa10.04□□□□□ -0.8
VMP1-206ENST00000587945 ZNF493Q6ZR52 646 aa10.04□□□□□ -0.8
VMP1-206ENST00000587945 TMEM263Q8WUH6 116 aaKnown RBP10.04□□□□□ -0.8
VMP1-206ENST00000587945 RNF141Q8WVD5 230 aa10.04□□□□□ -0.8
VMP1-206ENST00000587945 ZNF586Q9NXT0 402 aa10.04□□□□□ -0.8
VMP1-206ENST00000587945 PXMP4Q9Y6I8 212 aa10.04□□□□□ -0.8
VMP1-206ENST00000587945 PCLOQ9Y6V0 5065 aa10.04□□□□□ -0.8
VMP1-206ENST00000587945 MED14OSP0DP75 135 aa10.03□□□□□ -0.8
VMP1-206ENST00000587945 PVALBP20472 110 aaPredicted RBP10.03□□□□□ -0.8
VMP1-206ENST00000587945 FAM3BP58499 235 aaPredicted RBP10.03□□□□□ -0.8
VMP1-206ENST00000587945 BAXQ07812 192 aa10.03□□□□□ -0.8
VMP1-206ENST00000587945 RAB32Q13637 225 aa10.03□□□□□ -0.8
VMP1-206ENST00000587945 VWC2Q2TAL6 325 aa10.03□□□□□ -0.8
VMP1-206ENST00000587945 SOHLH1Q5JUK2 328 aa10.03□□□□□ -0.8
VMP1-206ENST00000587945 ZNF575Q86XF7 245 aa10.03□□□□□ -0.8
VMP1-206ENST00000587945 TMEM252Q8N6L7 170 aa10.03□□□□□ -0.8
VMP1-206ENST00000587945 OR1L4Q8NGR5 311 aa10.03□□□□□ -0.8
VMP1-206ENST00000587945 ZNRF2Q8NHG8 242 aa10.03□□□□□ -0.8
VMP1-206ENST00000587945 SLC39A9Q9NUM3 307 aa10.03□□□□□ -0.8
VMP1-206ENST00000587945 RYR1P21817 5038 aa10.02□□□□□ -0.81
VMP1-206ENST00000587945 TRAV12-3A0A0B4J271 114 aa10.02□□□□□ -0.81
VMP1-206ENST00000587945 RPL29P47914 159 aaKnown RBP10.02□□□□□ -0.81
VMP1-206ENST00000587945 SULT1A1P50225 295 aa10.02□□□□□ -0.81
VMP1-206ENST00000587945 IL15RAQ13261 267 aa10.02□□□□□ -0.81
VMP1-206ENST00000587945 CCDC28AQ8IWP9 274 aa10.02□□□□□ -0.81
VMP1-206ENST00000587945 C20orf144Q9BQM9 153 aa10.02□□□□□ -0.81
VMP1-206ENST00000587945 LYRM2Q9NU23 88 aaPredicted RBP10.02□□□□□ -0.81
VMP1-206ENST00000587945 LINC00588Q9Y4M8 146 aa10.02□□□□□ -0.81
VMP1-206ENST00000587945 FAM240BA0A1B0GVZ2 78 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 GAGE12BA1L429 117 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 NPIPB6E9PJ23 425 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 M0R3E3 92 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 GAGE7O76087 117 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 GAGE12FP0CL80 117 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 GAGE12GP0CL81 117 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 GAGE12IP0CL82 117 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 FGF7P21781 194 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 S100A11P31949 105 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 ERCC8Q13216 396 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 OR5I1Q13606 314 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 GUK1Q16774 197 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 GCSAMLQ5JQS6 135 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 PFDN5Q99471 154 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 CCDC32Q9BV29 185 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 NDUFA13Q9P0J0 144 aa10.01□□□□□ -0.81
VMP1-206ENST00000587945 TRBV19A0A075B6N1 114 aa10□□□□□ -0.81
VMP1-206ENST00000587945 NBDYA0A0U1RRE5 68 aa10□□□□□ -0.81
VMP1-206ENST00000587945 LEPP41159 167 aa10□□□□□ -0.81
VMP1-206ENST00000587945 CCL18P55774 89 aa10□□□□□ -0.81
VMP1-206ENST00000587945 TNP2Q05952 138 aa10□□□□□ -0.81
VMP1-206ENST00000587945 CLINT1Q14677 625 aa10□□□□□ -0.81
VMP1-206ENST00000587945 STX12Q86Y82 276 aa10□□□□□ -0.81
VMP1-206ENST00000587945 LINC00612Q8N6U2 182 aa10□□□□□ -0.81
VMP1-206ENST00000587945 GPN1Q9HCN4 374 aaPredicted RBP10□□□□□ -0.81
VMP1-206ENST00000587945 LRP1BQ9NZR2 4599 aa10□□□□□ -0.81
VMP1-206ENST00000587945 TRAV26-1A0A087WT03 109 aa9.99□□□□□ -0.81
VMP1-206ENST00000587945 A0A0J9YY99 117 aa9.99□□□□□ -0.81
VMP1-206ENST00000587945 NDUFB4O95168 129 aa9.99□□□□□ -0.81
VMP1-206ENST00000587945 PYYP10082 97 aa9.99□□□□□ -0.81
VMP1-206ENST00000587945 HOXA5P20719 270 aa9.99□□□□□ -0.81
VMP1-206ENST00000587945 HBG1P69891 147 aa9.99□□□□□ -0.81
VMP1-206ENST00000587945 HBG2P69892 147 aa9.99□□□□□ -0.81
VMP1-206ENST00000587945 SSX7Q7RTT5 188 aa9.99□□□□□ -0.81
VMP1-206ENST00000587945 BLNKQ8WV28 456 aa9.99□□□□□ -0.81
VMP1-206ENST00000587945 ODF3Q96PU9 254 aa9.99□□□□□ -0.81
VMP1-206ENST00000587945 NACAE9PAV3 2078 aa9.98□□□□□ -0.81
VMP1-206ENST00000587945 SNURFLB1AK76 121 aa9.98□□□□□ -0.81
VMP1-206ENST00000587945 ZNF253O75346 499 aa9.98□□□□□ -0.81
VMP1-206ENST00000587945 SIX6O95475 246 aa9.98□□□□□ -0.81
VMP1-206ENST00000587945 RLN2P04090 185 aa9.98□□□□□ -0.81
VMP1-206ENST00000587945 NHLH2Q02577 135 aa9.98□□□□□ -0.81
VMP1-206ENST00000587945 ATP6V1FQ16864 119 aa9.98□□□□□ -0.81
VMP1-206ENST00000587945 EXOC3-AS1Q8N2X6 119 aa9.98□□□□□ -0.81
VMP1-206ENST00000587945 C6orf223Q8N319 242 aa9.98□□□□□ -0.81
VMP1-206ENST00000587945 THAP6Q8TBB0 222 aa9.98□□□□□ -0.81
VMP1-206ENST00000587945 CHAC2Q8WUX2 184 aa9.98□□□□□ -0.81
VMP1-206ENST00000587945 GNPNAT1Q96EK6 184 aaPredicted RBP9.98□□□□□ -0.81
VMP1-206ENST00000587945 TMEM14CQ9P0S9 112 aa9.98□□□□□ -0.81
VMP1-206ENST00000587945 HIST1H1EP10412 219 aaKnown RBP9.97□□□□□ -0.81
VMP1-206ENST00000587945 M6PRP20645 277 aa9.97□□□□□ -0.81
VMP1-206ENST00000587945 BTN1A1Q13410 526 aa9.97□□□□□ -0.81
VMP1-206ENST00000587945 MZT2BQ6NZ67 158 aa9.97□□□□□ -0.81
VMP1-206ENST00000587945 Q6ZTI0 123 aa9.97□□□□□ -0.81
VMP1-206ENST00000587945 RXFP4Q8TDU9 374 aa9.97□□□□□ -0.81
VMP1-206ENST00000587945 MRPL53Q96EL3 112 aaKnown RBP9.97□□□□□ -0.81
VMP1-206ENST00000587945 PYGO2Q9BRQ0 406 aa9.97□□□□□ -0.81
VMP1-206ENST00000587945 NPCDR1Q9BY65 106 aa9.97□□□□□ -0.81
VMP1-206ENST00000587945 AGPAT4-IT1Q9H0P7 198 aa9.97□□□□□ -0.81
VMP1-206ENST00000587945 TIMM9Q9Y5J7 89 aa9.97□□□□□ -0.81
VMP1-206ENST00000587945 HSPG2P98160 4391 aa9.97□□□□□ -0.81
VMP1-206ENST00000587945 C7orf71A4D174 169 aa9.96□□□□□ -0.82
VMP1-206ENST00000587945 SLC25A5P05141 298 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms