RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 PRR25Q96S07 402 aa12.91□□□□□ -0.34
RANBP3-209ENST00000587411 CHAC1Q9BUX1 264 aa12.91□□□□□ -0.34
RANBP3-209ENST00000587411 NXT2Q9NPJ8 142 aaKnown RBP12.91□□□□□ -0.34
RANBP3-209ENST00000587411 HLA-DRB4P13762 266 aa12.9□□□□□ -0.34
RANBP3-209ENST00000587411 FXYD2P54710 66 aa12.9□□□□□ -0.34
RANBP3-209ENST00000587411 SAMD13Q5VXD3 122 aa12.9□□□□□ -0.34
RANBP3-209ENST00000587411 RPEQ96AT9 228 aa12.9□□□□□ -0.34
RANBP3-209ENST00000587411 SMPXQ9UHP9 88 aa12.9□□□□□ -0.34
RANBP3-209ENST00000587411 HLA-DRB4X5D2U9 266 aa12.9□□□□□ -0.34
RANBP3-209ENST00000587411 PLXNB1O43157 2135 aa12.9□□□□□ -0.34
RANBP3-209ENST00000587411 EGR2P11161 476 aaPredicted RBP12.9□□□□□ -0.34
RANBP3-209ENST00000587411 RPL24P83731 157 aaKnown RBP12.9□□□□□ -0.34
RANBP3-209ENST00000587411 C16orf97H3BN30 126 aa12.89□□□□□ -0.35
RANBP3-209ENST00000587411 EVI2AP22794 236 aa12.89□□□□□ -0.35
RANBP3-209ENST00000587411 BSPH1Q075Z2 132 aa12.89□□□□□ -0.35
RANBP3-209ENST00000587411 TM4SF20Q53R12 229 aa12.89□□□□□ -0.35
RANBP3-209ENST00000587411 VGLL1Q99990 258 aa12.89□□□□□ -0.35
RANBP3-209ENST00000587411 HHLA3Q9XRX5 114 aa12.89□□□□□ -0.35
RANBP3-209ENST00000587411 PRB4P10163 310 aaPredicted RBP12.89□□□□□ -0.35
RANBP3-209ENST00000587411 TMEM11P17152 192 aa12.89□□□□□ -0.35
RANBP3-209ENST00000587411 C18orf15Q96N68 181 aa12.89□□□□□ -0.35
RANBP3-209ENST00000587411 PLCE1Q9P212 2302 aa12.89□□□□□ -0.35
RANBP3-209ENST00000587411 IGKCP01834 107 aa12.88□□□□□ -0.35
RANBP3-209ENST00000587411 LEPP41159 167 aa12.88□□□□□ -0.35
RANBP3-209ENST00000587411 SRSF1Q07955 248 aaKnown RBP eCLIP12.88□□□□□ -0.35
RANBP3-209ENST00000587411 IGFL3Q6UXB1 125 aa12.88□□□□□ -0.35
RANBP3-209ENST00000587411 ZNF562Q6V9R5 426 aa12.88□□□□□ -0.35
RANBP3-209ENST00000587411 WFDC3Q8IUB2 231 aa12.88□□□□□ -0.35
RANBP3-209ENST00000587411 TM2D2Q9BX73 214 aa12.88□□□□□ -0.35
RANBP3-209ENST00000587411 CNFNQ9BYD5 112 aa12.88□□□□□ -0.35
RANBP3-209ENST00000587411 IGKV2D-26A0A0A0MRZ7 120 aa12.88□□□□□ -0.35
RANBP3-209ENST00000587411 TEX48A0A1B0GUV7 120 aa12.88□□□□□ -0.35
RANBP3-209ENST00000587411 GNG7O60262 68 aa12.88□□□□□ -0.35
RANBP3-209ENST00000587411 ATP5LO75964 103 aa12.88□□□□□ -0.35
RANBP3-209ENST00000587411 PHLDA1Q8WV24 401 aaPredicted RBP12.88□□□□□ -0.35
RANBP3-209ENST00000587411 RNASE6Q93091 150 aaKnown RBP12.88□□□□□ -0.35
RANBP3-209ENST00000587411 RNF185Q96GF1 192 aa12.88□□□□□ -0.35
RANBP3-209ENST00000587411 ZNF48Q96MX3 618 aaPredicted RBP12.88□□□□□ -0.35
RANBP3-209ENST00000587411 RALYQ9UKM9 306 aaKnown RBP12.88□□□□□ -0.35
RANBP3-209ENST00000587411 ICE1Q9Y2F5 2266 aa12.88□□□□□ -0.35
RANBP3-209ENST00000587411 IGKV2-40A0A087WW87 121 aaPredicted RBP12.87□□□□□ -0.35
RANBP3-209ENST00000587411 IGKV2D-40P01614 121 aaPredicted RBP12.87□□□□□ -0.35
RANBP3-209ENST00000587411 PPIAL4CA0A0B4J2A2 164 aa12.87□□□□□ -0.35
RANBP3-209ENST00000587411 PRSS1P07477 247 aa12.87□□□□□ -0.35
RANBP3-209ENST00000587411 PPIAL4GP0DN37 164 aa12.87□□□□□ -0.35
RANBP3-209ENST00000587411 RPL7P18124 248 aaKnown RBP12.87□□□□□ -0.35
RANBP3-209ENST00000587411 DSPP15924 2871 aaKnown RBP12.87□□□□□ -0.35
RANBP3-209ENST00000587411 GPR179Q6PRD1 2367 aa12.87□□□□□ -0.35
RANBP3-209ENST00000587411 PRRC2CQ9Y520 2896 aaKnown RBP12.86□□□□□ -0.35
RANBP3-209ENST00000587411 DPM2O94777 84 aa12.86□□□□□ -0.35
RANBP3-209ENST00000587411 CEND1Q8N111 149 aa12.86□□□□□ -0.35
RANBP3-209ENST00000587411 FAM57AQ8TBR7 257 aa12.86□□□□□ -0.35
RANBP3-209ENST00000587411 DYNLRB1Q9NP97 96 aa12.86□□□□□ -0.35
RANBP3-209ENST00000587411 TRBV25-1A0A075B6N4 114 aa12.86□□□□□ -0.35
RANBP3-209ENST00000587411 FTH1P19P0C7X4 201 aa12.86□□□□□ -0.35
RANBP3-209ENST00000587411 CLEC2AQ6UVW9 174 aa12.86□□□□□ -0.35
RANBP3-209ENST00000587411 J3QR89 54 aa12.85□□□□□ -0.35
RANBP3-209ENST00000587411 MFAP4P55083 255 aa12.85□□□□□ -0.35
RANBP3-209ENST00000587411 F8W1H4 67 aa12.85□□□□□ -0.35
RANBP3-209ENST00000587411 TNFRSF6BO95407 300 aa12.85□□□□□ -0.35
RANBP3-209ENST00000587411 DLX1P56177 255 aa12.85□□□□□ -0.35
RANBP3-209ENST00000587411 GFRALQ6UXV0 394 aa12.85□□□□□ -0.35
RANBP3-209ENST00000587411 Q6ZS92 163 aa12.85□□□□□ -0.35
RANBP3-209ENST00000587411 SIGMAR1Q99720 223 aa12.85□□□□□ -0.35
RANBP3-209ENST00000587411 NCOR1O75376 2440 aa12.85□□□□□ -0.35
RANBP3-209ENST00000587411 NPIPB5A8MRT5 1133 aa12.85□□□□□ -0.35
RANBP3-209ENST00000587411 E9PLD3 99 aa12.85□□□□□ -0.35
RANBP3-209ENST00000587411 LY6LH3BQJ8 138 aa12.85□□□□□ -0.35
RANBP3-209ENST00000587411 COX7A1P24310 79 aa12.85□□□□□ -0.35
RANBP3-209ENST00000587411 TAL2Q16559 108 aa12.85□□□□□ -0.35
RANBP3-209ENST00000587411 NHP2Q9NX24 153 aaKnown RBP12.85□□□□□ -0.35
RANBP3-209ENST00000587411 ZNF80P51504 273 aaPredicted RBP12.84□□□□□ -0.35
RANBP3-209ENST00000587411 KLF17Q5JT82 389 aaPredicted RBP12.84□□□□□ -0.35
RANBP3-209ENST00000587411 K7ERJ3 54 aa12.84□□□□□ -0.35
RANBP3-209ENST00000587411 FOXC2Q99958 501 aa12.84□□□□□ -0.35
RANBP3-209ENST00000587411 NBR2O15453 112 aa12.83□□□□□ -0.36
RANBP3-209ENST00000587411 Q8N8P6 123 aa12.83□□□□□ -0.36
RANBP3-209ENST00000587411 FABP5P3A8MUU1 101 aa12.83□□□□□ -0.36
RANBP3-209ENST00000587411 ORM1P02763 201 aa12.83□□□□□ -0.36
RANBP3-209ENST00000587411 PRB3Q04118 309 aaPredicted RBP12.83□□□□□ -0.36
RANBP3-209ENST00000587411 ZC2HC1BQ5TFG8 222 aa12.83□□□□□ -0.36
RANBP3-209ENST00000587411 FOXI2Q6ZQN5 318 aa12.83□□□□□ -0.36
RANBP3-209ENST00000587411 Q8TAT8 98 aa12.83□□□□□ -0.36
RANBP3-209ENST00000587411 TTTY13Q9BZ97 58 aa12.83□□□□□ -0.36
RANBP3-209ENST00000587411 TIMM23O14925 209 aa12.82□□□□□ -0.36
RANBP3-209ENST00000587411 AZU1P20160 251 aa12.82□□□□□ -0.36
RANBP3-209ENST00000587411 CD300EQ496F6 205 aaPredicted RBP12.82□□□□□ -0.36
RANBP3-209ENST00000587411 GTSCR1Q86UQ5 136 aa12.82□□□□□ -0.36
RANBP3-209ENST00000587411 ZNF575Q86XF7 245 aa12.82□□□□□ -0.36
RANBP3-209ENST00000587411 TMEM158Q8WZ71 300 aa12.82□□□□□ -0.36
RANBP3-209ENST00000587411 MSRB1Q9NZV6 116 aa12.82□□□□□ -0.36
RANBP3-209ENST00000587411 IGLV11-55A0A075B6I3 123 aa12.82□□□□□ -0.36
RANBP3-209ENST00000587411 SPANXB1Q9NS25 103 aaPredicted RBP12.82□□□□□ -0.36
RANBP3-209ENST00000587411 A0A1W2PRD5 423 aa12.81□□□□□ -0.36
RANBP3-209ENST00000587411 A0A1W2PRF3 423 aa12.81□□□□□ -0.36
RANBP3-209ENST00000587411 A0A1W2PRM7 423 aa12.81□□□□□ -0.36
RANBP3-209ENST00000587411 TMEM8BA6NDV4 472 aa12.81□□□□□ -0.36
RANBP3-209ENST00000587411 IGLL5B9A064 214 aa12.81□□□□□ -0.36
RANBP3-209ENST00000587411 SCGB2A1O75556 95 aa12.81□□□□□ -0.36
RANBP3-209ENST00000587411 PSMG3-AS1Q96PY0 264 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms