RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 MBD3L1Q8WWY6 194 aa7.75□□□□□ -1.17
ZNF540-205ENST00000587220 CIB3Q96Q77 187 aaPredicted RBP7.75□□□□□ -1.17
ZNF540-205ENST00000587220 SH3BGRL3Q9H299 93 aa7.75□□□□□ -1.17
ZNF540-205ENST00000587220 SEPSECSQ9HD40 501 aaKnown RBP7.75□□□□□ -1.17
ZNF540-205ENST00000587220 TIMM9Q9Y5J7 89 aa7.75□□□□□ -1.17
ZNF540-205ENST00000587220 BIRC6Q9NR09 4857 aa7.74□□□□□ -1.17
ZNF540-205ENST00000587220 IGLL5B9A064 214 aa7.74□□□□□ -1.17
ZNF540-205ENST00000587220 EIF3GO75821 320 aaKnown RBP eCLIP7.74□□□□□ -1.17
ZNF540-205ENST00000587220 GIG44P09565 113 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-205ENST00000587220 RBMY1A1P0DJD3 496 aaKnown RBP7.74□□□□□ -1.17
ZNF540-205ENST00000587220 RBMY1CP0DJD4 496 aa7.74□□□□□ -1.17
ZNF540-205ENST00000587220 ID1P41134 155 aa7.74□□□□□ -1.17
ZNF540-205ENST00000587220 PAX9P55771 341 aa7.74□□□□□ -1.17
ZNF540-205ENST00000587220 TCTAP57738 103 aa7.74□□□□□ -1.17
ZNF540-205ENST00000587220 HBG1P69891 147 aa7.74□□□□□ -1.17
ZNF540-205ENST00000587220 HBG2P69892 147 aa7.74□□□□□ -1.17
ZNF540-205ENST00000587220 RBMY1FQ15415 496 aaKnown RBP7.74□□□□□ -1.17
ZNF540-205ENST00000587220 C1orf194Q5T5A4 169 aa7.74□□□□□ -1.17
ZNF540-205ENST00000587220 OR8I2Q8N0Y5 310 aa7.74□□□□□ -1.17
ZNF540-205ENST00000587220 TVP23CQ96ET8 276 aa7.74□□□□□ -1.17
ZNF540-205ENST00000587220 NIPSNAP3BQ9BS92 247 aa7.74□□□□□ -1.17
ZNF540-205ENST00000587220 MAGT1Q9H0U3 335 aa7.74□□□□□ -1.17
ZNF540-205ENST00000587220 XCL2Q9UBD3 114 aa7.74□□□□□ -1.17
ZNF540-205ENST00000587220 IGKV1D-37A0A075B6S9 117 aa7.73□□□□□ -1.17
ZNF540-205ENST00000587220 LOC102723971A0A1B0GUV8 181 aa7.73□□□□□ -1.17
ZNF540-205ENST00000587220 H3BMM0 161 aa7.73□□□□□ -1.17
ZNF540-205ENST00000587220 SYNGR2O43760 224 aa7.73□□□□□ -1.17
ZNF540-205ENST00000587220 IFNA1P01562 189 aa7.73□□□□□ -1.17
ZNF540-205ENST00000587220 IGKV3-20P01619 116 aa7.73□□□□□ -1.17
ZNF540-205ENST00000587220 HLA-DMBP28068 263 aa7.73□□□□□ -1.17
ZNF540-205ENST00000587220 ICAM4Q14773 271 aa7.73□□□□□ -1.17
ZNF540-205ENST00000587220 ATP6V1FQ16864 119 aa7.73□□□□□ -1.17
ZNF540-205ENST00000587220 SPANXN5Q5MJ07 72 aa7.73□□□□□ -1.17
ZNF540-205ENST00000587220 RPP25LQ8N5L8 163 aaKnown RBP7.73□□□□□ -1.17
ZNF540-205ENST00000587220 SCGB1C1Q8TD33 95 aa7.73□□□□□ -1.17
ZNF540-205ENST00000587220 TRGV9Q99603 122 aa7.73□□□□□ -1.17
ZNF540-205ENST00000587220 TMPRSS5Q9H3S3 457 aa7.73□□□□□ -1.17
ZNF540-205ENST00000587220 X6R8D5 127 aa7.73□□□□□ -1.17
ZNF540-205ENST00000587220 TRAV10A0A0B4J240 114 aa7.72□□□□□ -1.17
ZNF540-205ENST00000587220 H3BP45 60 aa7.72□□□□□ -1.17
ZNF540-205ENST00000587220 H3BQ15 152 aa7.72□□□□□ -1.17
ZNF540-205ENST00000587220 HLA-DRB4P13762 266 aa7.72□□□□□ -1.17
ZNF540-205ENST00000587220 S100A7P31151 101 aa7.72□□□□□ -1.17
ZNF540-205ENST00000587220 PSMB3P49720 205 aa7.72□□□□□ -1.17
ZNF540-205ENST00000587220 FHITP49789 147 aa7.72□□□□□ -1.17
ZNF540-205ENST00000587220 SNRPEP62304 92 aaKnown RBP7.72□□□□□ -1.17
ZNF540-205ENST00000587220 SAMD13Q5VXD3 122 aa7.72□□□□□ -1.17
ZNF540-205ENST00000587220 CSNK1G2-AS1Q8NCQ2 148 aa7.72□□□□□ -1.17
ZNF540-205ENST00000587220 CTDSP1Q9GZU7 261 aa7.72□□□□□ -1.17
ZNF540-205ENST00000587220 SLC25A22Q9H936 323 aa7.72□□□□□ -1.17
ZNF540-205ENST00000587220 HLA-DRB4X5D2U9 266 aa7.72□□□□□ -1.17
ZNF540-205ENST00000587220 IGHV3OR16-12A0A075B7B8 117 aa7.71□□□□□ -1.18
ZNF540-205ENST00000587220 ELOA3CA0A087WX78 387 aaPredicted RBP7.71□□□□□ -1.18
ZNF540-205ENST00000587220 MBP02144 154 aa7.71□□□□□ -1.18
ZNF540-205ENST00000587220 BCL2P10415 239 aa7.71□□□□□ -1.18
ZNF540-205ENST00000587220 S100PP25815 95 aa7.71□□□□□ -1.18
ZNF540-205ENST00000587220 GALR1P47211 349 aa7.71□□□□□ -1.18
ZNF540-205ENST00000587220 EBLN2Q6P2I7 272 aa7.71□□□□□ -1.18
ZNF540-205ENST00000587220 FOXI2Q6ZQN5 318 aa7.71□□□□□ -1.18
ZNF540-205ENST00000587220 Q6ZTC4 211 aa7.71□□□□□ -1.18
ZNF540-205ENST00000587220 THAP8Q8NA92 274 aa7.71□□□□□ -1.18
ZNF540-205ENST00000587220 OR4B1Q8NGF8 309 aa7.71□□□□□ -1.18
ZNF540-205ENST00000587220 OR51M1Q9H341 326 aa7.71□□□□□ -1.18
ZNF540-205ENST00000587220 IGKV1OR2-108A0A075B7D4 117 aa7.7□□□□□ -1.18
ZNF540-205ENST00000587220 SMCO3A2RU48 225 aa7.7□□□□□ -1.18
ZNF540-205ENST00000587220 ISLRO14498 428 aa7.7□□□□□ -1.18
ZNF540-205ENST00000587220 ORM2P19652 201 aa7.7□□□□□ -1.18
ZNF540-205ENST00000587220 HOXA5P20719 270 aa7.7□□□□□ -1.18
ZNF540-205ENST00000587220 EMP1P54849 157 aa7.7□□□□□ -1.18
ZNF540-205ENST00000587220 FXYD7P58549 80 aa7.7□□□□□ -1.18
ZNF540-205ENST00000587220 DEFB1P60022 68 aa7.7□□□□□ -1.18
ZNF540-205ENST00000587220 FABP9Q0Z7S8 132 aa7.7□□□□□ -1.18
ZNF540-205ENST00000587220 GDF5OSQ5U4N7 250 aa7.7□□□□□ -1.18
ZNF540-205ENST00000587220 SPATA31B1PQ5VZV4 182 aa7.7□□□□□ -1.18
ZNF540-205ENST00000587220 ZFP82Q8N141 532 aa7.7□□□□□ -1.18
ZNF540-205ENST00000587220 C16orf92Q96LL3 132 aa7.7□□□□□ -1.18
ZNF540-205ENST00000587220 TMEM147Q9BVK8 224 aa7.7□□□□□ -1.18
ZNF540-205ENST00000587220 RPRMQ9NS64 109 aa7.7□□□□□ -1.18
ZNF540-205ENST00000587220 VAX2Q9UIW0 290 aa7.7□□□□□ -1.18
ZNF540-205ENST00000587220 DEFB131BA0A096LNP1 70 aa7.69□□□□□ -1.18
ZNF540-205ENST00000587220 TMEM250H0YL14 139 aa7.69□□□□□ -1.18
ZNF540-205ENST00000587220 CST7O76096 145 aa7.69□□□□□ -1.18
ZNF540-205ENST00000587220 CCL20P78556 96 aa7.69□□□□□ -1.18
ZNF540-205ENST00000587220 DLK1P80370 383 aa7.69□□□□□ -1.18
ZNF540-205ENST00000587220 TMEM14EPQ6UXP3 125 aa7.69□□□□□ -1.18
ZNF540-205ENST00000587220 CYB561D1Q8N8Q1 229 aa7.69□□□□□ -1.18
ZNF540-205ENST00000587220 OR1B1Q8NGR6 318 aa7.69□□□□□ -1.18
ZNF540-205ENST00000587220 RSG1Q9BU20 258 aa7.69□□□□□ -1.18
ZNF540-205ENST00000587220 WDR61Q9GZS3 305 aaKnown RBP7.69□□□□□ -1.18
ZNF540-205ENST00000587220 PSENENQ9NZ42 101 aa7.69□□□□□ -1.18
ZNF540-205ENST00000587220 SLC45A2Q9UMX9 530 aa7.69□□□□□ -1.18
ZNF540-205ENST00000587220 CELA1Q9UNI1 258 aa7.69□□□□□ -1.18
ZNF540-205ENST00000587220 TRBV24-1A0A075B6N3 115 aa7.68□□□□□ -1.18
ZNF540-205ENST00000587220 IGHV4-4A0A075B6R2 117 aa7.68□□□□□ -1.18
ZNF540-205ENST00000587220 TMEM189A5PLL7 270 aa7.68□□□□□ -1.18
ZNF540-205ENST00000587220 SMIM9A6NGZ8 99 aa7.68□□□□□ -1.18
ZNF540-205ENST00000587220 PCP4L1A6NKN8 68 aa7.68□□□□□ -1.18
ZNF540-205ENST00000587220 PRSS46E5RG02 174 aa7.68□□□□□ -1.18
ZNF540-205ENST00000587220 SOCS3O14543 225 aa7.68□□□□□ -1.18
ZNF540-205ENST00000587220 SPART-AS1P0CW21 52 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms