RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 PGPA6NDG6 321 aa10.09□□□□□ -0.79
VMP1-203ENST00000586245 KNCNA6PVL3 124 aa10.09□□□□□ -0.79
VMP1-203ENST00000586245 PPT1P50897 306 aa10.09□□□□□ -0.79
VMP1-203ENST00000586245 ZNF680Q8NEM1 530 aa10.09□□□□□ -0.79
VMP1-203ENST00000586245 CMTM2Q8TAZ6 248 aa10.09□□□□□ -0.79
VMP1-203ENST00000586245 CITED4Q96RK1 184 aa10.09□□□□□ -0.79
VMP1-203ENST00000586245 SAV1Q9H4B6 383 aaPredicted RBP10.09□□□□□ -0.79
VMP1-203ENST00000586245 A0A0J9YX75 114 aa10.08□□□□□ -0.8
VMP1-203ENST00000586245 A0A1W2PRE2 83 aa10.08□□□□□ -0.8
VMP1-203ENST00000586245 ZNF705FA8MVS1 300 aaPredicted RBP10.08□□□□□ -0.8
VMP1-203ENST00000586245 A8MZ25 164 aa10.08□□□□□ -0.8
VMP1-203ENST00000586245 F6UB75 175 aa10.08□□□□□ -0.8
VMP1-203ENST00000586245 M0R3E3 92 aa10.08□□□□□ -0.8
VMP1-203ENST00000586245 HLA-DRB4P13762 266 aa10.08□□□□□ -0.8
VMP1-203ENST00000586245 UBE2G2P60604 165 aa10.08□□□□□ -0.8
VMP1-203ENST00000586245 OR10J6PQ8NGY7 276 aa10.08□□□□□ -0.8
VMP1-203ENST00000586245 RXFP4Q8TDU9 374 aa10.08□□□□□ -0.8
VMP1-203ENST00000586245 HLA-DRB4X5D2U9 266 aa10.08□□□□□ -0.8
VMP1-203ENST00000586245 LOC102724200A0A096LPH7 203 aaPredicted RBP10.07□□□□□ -0.8
VMP1-203ENST00000586245 DUSP14O95147 198 aaKnown RBP10.07□□□□□ -0.8
VMP1-203ENST00000586245 DEFB1P60022 68 aa10.07□□□□□ -0.8
VMP1-203ENST00000586245 OR8A1Q8NGG7 326 aa10.07□□□□□ -0.8
VMP1-203ENST00000586245 NKX6-2Q9C056 277 aaPredicted RBP10.07□□□□□ -0.8
VMP1-203ENST00000586245 ARL2-SNX15V9GYD0 113 aa10.07□□□□□ -0.8
VMP1-203ENST00000586245 FAM74A7A6NL05 159 aa10.06□□□□□ -0.8
VMP1-203ENST00000586245 PRAC2D3DTV9 90 aa10.06□□□□□ -0.8
VMP1-203ENST00000586245 H3BMM0 161 aa10.06□□□□□ -0.8
VMP1-203ENST00000586245 IFNA1P01562 189 aa10.06□□□□□ -0.8
VMP1-203ENST00000586245 SLC25A5P05141 298 aaKnown RBP10.06□□□□□ -0.8
VMP1-203ENST00000586245 FRMD6-AS1P0C7T7 363 aa10.06□□□□□ -0.8
VMP1-203ENST00000586245 RPL35AP18077 110 aaKnown RBP10.06□□□□□ -0.8
VMP1-203ENST00000586245 SUMO1P63165 101 aaKnown RBP10.06□□□□□ -0.8
VMP1-203ENST00000586245 HIST1H1AQ02539 215 aaPredicted RBP10.06□□□□□ -0.8
VMP1-203ENST00000586245 GDF5OSQ5U4N7 250 aa10.06□□□□□ -0.8
VMP1-203ENST00000586245 CST9LP1Q5W188 147 aa10.06□□□□□ -0.8
VMP1-203ENST00000586245 OR4B1Q8NGF8 309 aa10.06□□□□□ -0.8
VMP1-203ENST00000586245 MANBALQ9NQG1 85 aa10.06□□□□□ -0.8
VMP1-203ENST00000586245 GNG13Q9P2W3 67 aa10.06□□□□□ -0.8
VMP1-203ENST00000586245 RPH3ALQ9UNE2 315 aa10.06□□□□□ -0.8
VMP1-203ENST00000586245 YTHDF2Q9Y5A9 579 aaKnown RBP10.06□□□□□ -0.8
VMP1-203ENST00000586245 RBMY1BA6NDE4 496 aaKnown RBP10.05□□□□□ -0.8
VMP1-203ENST00000586245 RBMY1EA6NEQ0 496 aaKnown RBP10.05□□□□□ -0.8
VMP1-203ENST00000586245 GGTLC3B5MD39 225 aa10.05□□□□□ -0.8
VMP1-203ENST00000586245 PAGE4O60829 102 aa10.05□□□□□ -0.8
VMP1-203ENST00000586245 IGKV3-20P01619 116 aa10.05□□□□□ -0.8
VMP1-203ENST00000586245 RBMY1DP0C7P1 496 aaKnown RBP10.05□□□□□ -0.8
VMP1-203ENST00000586245 ZNF705DP0CH99 300 aaPredicted RBP10.05□□□□□ -0.8
VMP1-203ENST00000586245 ZNF705BP0CI00 300 aaPredicted RBP10.05□□□□□ -0.8
VMP1-203ENST00000586245 PRB4P10163 310 aaPredicted RBP10.05□□□□□ -0.8
VMP1-203ENST00000586245 CNN1P51911 297 aaKnown RBP10.05□□□□□ -0.8
VMP1-203ENST00000586245 NUTF2P61970 127 aaKnown RBP10.05□□□□□ -0.8
VMP1-203ENST00000586245 CCL20P78556 96 aa10.05□□□□□ -0.8
VMP1-203ENST00000586245 TRPT1Q86TN4 253 aaKnown RBP10.05□□□□□ -0.8
VMP1-203ENST00000586245 ARL6IP6Q8N6S5 226 aa10.05□□□□□ -0.8
VMP1-203ENST00000586245 C5orf17Q8NAS9 161 aa10.05□□□□□ -0.8
VMP1-203ENST00000586245 PPP1R14DQ9NXH3 145 aa10.05□□□□□ -0.8
VMP1-203ENST00000586245 IGKV2-40A0A087WW87 121 aaPredicted RBP10.04□□□□□ -0.8
VMP1-203ENST00000586245 IGKV2D-40P01614 121 aaPredicted RBP10.04□□□□□ -0.8
VMP1-203ENST00000586245 APOC4P55056 127 aa10.04□□□□□ -0.8
VMP1-203ENST00000586245 MORN3Q6PF18 240 aaPredicted RBP10.04□□□□□ -0.8
VMP1-203ENST00000586245 CLUHP3Q96NS8 147 aa10.04□□□□□ -0.8
VMP1-203ENST00000586245 EPDR1Q9UM22 224 aa10.04□□□□□ -0.8
VMP1-203ENST00000586245 KIR2DL5BA0A0G2JN68 375 aa10.03□□□□□ -0.8
VMP1-203ENST00000586245 KIR2DL5BA0A0G2JPC4 375 aa10.03□□□□□ -0.8
VMP1-203ENST00000586245 SERTM2A0A1B0GWG4 89 aa10.03□□□□□ -0.8
VMP1-203ENST00000586245 RBAKDNA6NC62 111 aa10.03□□□□□ -0.8
VMP1-203ENST00000586245 DIRC3C9JPN6 131 aa10.03□□□□□ -0.8
VMP1-203ENST00000586245 NPIPB6E9PJ23 425 aa10.03□□□□□ -0.8
VMP1-203ENST00000586245 K7EQM0 130 aa10.03□□□□□ -0.8
VMP1-203ENST00000586245 RAB14P61106 215 aa10.03□□□□□ -0.8
VMP1-203ENST00000586245 GNG5P63218 68 aa10.03□□□□□ -0.8
VMP1-203ENST00000586245 TMEM78Q5T7P6 136 aa10.03□□□□□ -0.8
VMP1-203ENST00000586245 LINC00322Q6ZN03 302 aaPredicted RBP10.03□□□□□ -0.8
VMP1-203ENST00000586245 ZNF767PQ75MW2 155 aa10.03□□□□□ -0.8
VMP1-203ENST00000586245 KIR2DL5AQ8N109 375 aa10.03□□□□□ -0.8
VMP1-203ENST00000586245 KIR2DL5BQ8NHK3 375 aa10.03□□□□□ -0.8
VMP1-203ENST00000586245 LYPD6BQ8NI32 183 aa10.03□□□□□ -0.8
VMP1-203ENST00000586245 CSTL1Q9H114 145 aa10.03□□□□□ -0.8
VMP1-203ENST00000586245 A8MTW9 85 aa10.02□□□□□ -0.81
VMP1-203ENST00000586245 C11orf94C9JXX5 98 aa10.02□□□□□ -0.81
VMP1-203ENST00000586245 F6UZH7 168 aa10.02□□□□□ -0.81
VMP1-203ENST00000586245 TAGLN2P37802 199 aaKnown RBP10.02□□□□□ -0.81
VMP1-203ENST00000586245 ATP5G3P48201 142 aa10.02□□□□□ -0.81
VMP1-203ENST00000586245 ERCC8Q13216 396 aa10.02□□□□□ -0.81
VMP1-203ENST00000586245 PMS2P11Q13670 270 aa10.02□□□□□ -0.81
VMP1-203ENST00000586245 GOLT1AQ6ZVE7 132 aa10.02□□□□□ -0.81
VMP1-203ENST00000586245 PCNPQ8WW12 178 aaKnown RBP10.02□□□□□ -0.81
VMP1-203ENST00000586245 LINC00477Q96M19 166 aa10.02□□□□□ -0.81
VMP1-203ENST00000586245 TXNDC17Q9BRA2 123 aa10.02□□□□□ -0.81
VMP1-203ENST00000586245 TCEAL7Q9BRU2 100 aa10.02□□□□□ -0.81
VMP1-203ENST00000586245 ATG101Q9BSB4 218 aa10.02□□□□□ -0.81
VMP1-203ENST00000586245 UBE2CO00762 179 aa10.01□□□□□ -0.81
VMP1-203ENST00000586245 CA1P00915 261 aaPredicted RBP10.01□□□□□ -0.81
VMP1-203ENST00000586245 TCRAP04437 139 aa10.01□□□□□ -0.81
VMP1-203ENST00000586245 HAGHQ16775 308 aa10.01□□□□□ -0.81
VMP1-203ENST00000586245 C9orf47Q6ZRZ4 202 aa10.01□□□□□ -0.81
VMP1-203ENST00000586245 CYB561D1Q8N8Q1 229 aa10.01□□□□□ -0.81
VMP1-203ENST00000586245 HIST1H2BAQ96A08 127 aa10.01□□□□□ -0.81
VMP1-203ENST00000586245 VGLL1Q99990 258 aa10.01□□□□□ -0.81
VMP1-203ENST00000586245 MEGF8Q7Z7M0 2845 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms