RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 EPDR1Q9UM22 224 aa7.74□□□□□ -1.17
MKS1-212ENST00000583577 LCE6AA0A183 80 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 FBLL1A6NHQ2 334 aaKnown RBP7.73□□□□□ -1.17
MKS1-212ENST00000583577 DLEU1O43261 78 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 HSBP1O75506 76 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 IGLV1-47P01700 117 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 IGHV3-7P01780 117 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 SRIP30626 198 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 S100A7P31151 101 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 MMDQ15546 238 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 PRSS8Q16651 343 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 Q6AWC8 147 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 TMEM86BQ8N661 226 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 C11orf44Q8N8P7 122 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 VN1R17PQ8TDU5 208 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 LEAP2Q969E1 77 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 FXYD5Q96DB9 178 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 TMEM68Q96MH6 324 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 RNASE7Q9H1E1 156 aaKnown RBP7.73□□□□□ -1.17
MKS1-212ENST00000583577 SERTAD4Q9NUC0 356 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 DPM3Q9P2X0 92 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 HILPDAQ9Y5L2 63 aa7.73□□□□□ -1.17
MKS1-212ENST00000583577 SERTM2A0A1B0GWG4 89 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 A0A1B0GXF2 115 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 BUB1B-PAK6H3BSN5 160 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 CRXO43186 299 aaPredicted RBP7.72□□□□□ -1.17
MKS1-212ENST00000583577 HYPMO75409 117 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 IGLV2-23P01705 113 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 IGHV4-59P01825 116 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 FOXA3P55318 350 aaPredicted RBP7.72□□□□□ -1.17
MKS1-212ENST00000583577 KRTDAPP60985 99 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 HBBP68871 147 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 CASC10Q5T4H9 136 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 CCDC144NLQ6NUI1 221 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 Q6ZSV7 163 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 NUDT10Q8NFP7 164 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 OR2D3Q8NGH3 330 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 C18orf32Q8TCD1 76 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 NUDT11Q96G61 164 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 AJUBAQ96IF1 538 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 MLST8Q9BVC4 326 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 PRSS22Q9GZN4 317 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 RPP21Q9H633 154 aaKnown RBP7.72□□□□□ -1.17
MKS1-212ENST00000583577 OTORQ9NRC9 128 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 FBXL7Q9UJT9 491 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 ZFP30Q9Y2G7 519 aa7.72□□□□□ -1.17
MKS1-212ENST00000583577 HECTD4Q9Y4D8 3996 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 IGKV1D-37A0A075B6S9 117 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 TRAV9-2A0A087WT02 112 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 WI2-2373I1.2A0A1W2PRP0 233 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 NPIPB6E9PJ23 425 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 H3BUX3 64 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 K7EQM0 130 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 LTAP01374 205 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 NBEAP1P0C6P0 100 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 IGLC2P0DOY2 106 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 IGLC3P0DOY3 106 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 BTF3P20290 206 aaKnown RBP7.71□□□□□ -1.18
MKS1-212ENST00000583577 RPL27AP46776 148 aaKnown RBP7.71□□□□□ -1.18
MKS1-212ENST00000583577 MFAP2P55001 183 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 WT1-ASQ06250 92 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 SPATA45Q537H7 98 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 UTF1Q5T230 341 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 LINC00305Q7Z4B0 112 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 Q8N976 141 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 GATD1Q8NB37 220 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 NUP35Q8NFH5 326 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 NPIPB3Q92617 1050 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 RPEQ96AT9 228 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 DAZAP1Q96EP5 407 aaKnown RBP7.71□□□□□ -1.18
MKS1-212ENST00000583577 B9D2Q9BPU9 175 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 ALKBH7Q9BT30 221 aaPredicted RBP7.71□□□□□ -1.18
MKS1-212ENST00000583577 NDFIP1Q9BT67 221 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 GOLT1BQ9Y3E0 138 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 U3KQK5 164 aa7.71□□□□□ -1.18
MKS1-212ENST00000583577 C19orf71A6NCJ1 209 aa7.7□□□□□ -1.18
MKS1-212ENST00000583577 OOSP1A8MZH6 123 aa7.7□□□□□ -1.18
MKS1-212ENST00000583577 SLC25A5P05141 298 aaKnown RBP7.7□□□□□ -1.18
MKS1-212ENST00000583577 CRYGBP07316 175 aa7.7□□□□□ -1.18
MKS1-212ENST00000583577 C3orf79P0CE67 100 aa7.7□□□□□ -1.18
MKS1-212ENST00000583577 PSMG4Q5JS54 123 aa7.7□□□□□ -1.18
MKS1-212ENST00000583577 LDLRAD2Q5SZI1 272 aa7.7□□□□□ -1.18
MKS1-212ENST00000583577 PATE2Q6UY27 113 aa7.7□□□□□ -1.18
MKS1-212ENST00000583577 RBPMS2Q6ZRY4 209 aaKnown RBP7.7□□□□□ -1.18
MKS1-212ENST00000583577 NIT1Q86X76 327 aa7.7□□□□□ -1.18
MKS1-212ENST00000583577 DYNAPQ8N1N2 210 aa7.7□□□□□ -1.18
MKS1-212ENST00000583577 TXN2Q99757 166 aa7.7□□□□□ -1.18
MKS1-212ENST00000583577 ST20Q9HBF5 79 aa7.7□□□□□ -1.18
MKS1-212ENST00000583577 VPREB3Q9UKI3 123 aa7.7□□□□□ -1.18
MKS1-212ENST00000583577 PAM16Q9Y3D7 125 aa7.7□□□□□ -1.18
MKS1-212ENST00000583577 TRAV30A0A087WSZ9 112 aa7.69□□□□□ -1.18
MKS1-212ENST00000583577 IGLC7A0M8Q6 106 aa7.69□□□□□ -1.18
MKS1-212ENST00000583577 CGB1A6NKQ9 187 aa7.69□□□□□ -1.18
MKS1-212ENST00000583577 LY6LH3BQJ8 138 aa7.69□□□□□ -1.18
MKS1-212ENST00000583577 SCGB2A1O75556 95 aa7.69□□□□□ -1.18
MKS1-212ENST00000583577 P01737 135 aa7.69□□□□□ -1.18
MKS1-212ENST00000583577 ZNF25P17030 456 aaPredicted RBP7.69□□□□□ -1.18
MKS1-212ENST00000583577 HNRNPA3P51991 378 aaKnown RBP7.69□□□□□ -1.18
MKS1-212ENST00000583577 FXYD3Q14802 87 aa7.69□□□□□ -1.18
MKS1-212ENST00000583577 LY6EQ16553 131 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms