RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 C1orf158Q8N1D5 194 aa9.1□□□□□ -0.95
SMARCE1-218ENST00000582955 PHLDA1Q8WV24 401 aaPredicted RBP9.1□□□□□ -0.95
SMARCE1-218ENST00000582955 FAM167A-AS1Q96KT0 104 aa9.1□□□□□ -0.95
SMARCE1-218ENST00000582955 PAXXQ9BUH6 204 aa9.1□□□□□ -0.95
SMARCE1-218ENST00000582955 OR51M1Q9H341 326 aa9.1□□□□□ -0.95
SMARCE1-218ENST00000582955 RFNGQ9Y644 331 aa9.1□□□□□ -0.95
SMARCE1-218ENST00000582955 TRAV12-2A0A075B6T6 113 aa9.09□□□□□ -0.95
SMARCE1-218ENST00000582955 SMIM9A6NGZ8 99 aa9.09□□□□□ -0.95
SMARCE1-218ENST00000582955 NDUFB4O95168 129 aa9.09□□□□□ -0.95
SMARCE1-218ENST00000582955 HBE1P02100 147 aa9.09□□□□□ -0.95
SMARCE1-218ENST00000582955 OR10J4P0C629 311 aa9.09□□□□□ -0.95
SMARCE1-218ENST00000582955 EMP1P54849 157 aa9.09□□□□□ -0.95
SMARCE1-218ENST00000582955 PDE6HQ13956 83 aa9.09□□□□□ -0.95
SMARCE1-218ENST00000582955 ACOT6Q3I5F7 207 aaPredicted RBP9.09□□□□□ -0.95
SMARCE1-218ENST00000582955 CEMP1Q6PRD7 247 aaPredicted RBP9.09□□□□□ -0.95
SMARCE1-218ENST00000582955 BAP18Q8IXM2 172 aa9.09□□□□□ -0.95
SMARCE1-218ENST00000582955 HSD17B11Q8NBQ5 300 aa9.09□□□□□ -0.95
SMARCE1-218ENST00000582955 RNF141Q8WVD5 230 aa9.09□□□□□ -0.95
SMARCE1-218ENST00000582955 NEU1Q99519 415 aa9.09□□□□□ -0.95
SMARCE1-218ENST00000582955 AAMDCQ9H7C9 122 aa9.09□□□□□ -0.95
SMARCE1-218ENST00000582955 KLK5Q9Y337 293 aaPredicted RBP9.09□□□□□ -0.95
SMARCE1-218ENST00000582955 M0R3E3 92 aa9.08□□□□□ -0.96
SMARCE1-218ENST00000582955 CRXO43186 299 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-218ENST00000582955 JTBO76095 146 aa9.08□□□□□ -0.96
SMARCE1-218ENST00000582955 NBEAP1P0C6P0 100 aa9.08□□□□□ -0.96
SMARCE1-218ENST00000582955 TAS2R45P59539 299 aa9.08□□□□□ -0.96
SMARCE1-218ENST00000582955 KHDC3LQ587J8 217 aa9.08□□□□□ -0.96
SMARCE1-218ENST00000582955 EXOC3-AS1Q8N2X6 119 aa9.08□□□□□ -0.96
SMARCE1-218ENST00000582955 MRPL53Q96EL3 112 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-218ENST00000582955 TNFSF18Q9UNG2 199 aa9.08□□□□□ -0.96
SMARCE1-218ENST00000582955 PRELID1Q9Y255 219 aa9.08□□□□□ -0.96
SMARCE1-218ENST00000582955 LCE6AA0A183 80 aa9.07□□□□□ -0.96
SMARCE1-218ENST00000582955 LOC102723971A0A1B0GUV8 181 aa9.07□□□□□ -0.96
SMARCE1-218ENST00000582955 A0A1W2PPV4 95 aa9.07□□□□□ -0.96
SMARCE1-218ENST00000582955 TMEM189A5PLL7 270 aa9.07□□□□□ -0.96
SMARCE1-218ENST00000582955 RNF222A6NCQ9 220 aa9.07□□□□□ -0.96
SMARCE1-218ENST00000582955 EIF3GO75821 320 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMARCE1-218ENST00000582955 M6PRP20645 277 aa9.07□□□□□ -0.96
SMARCE1-218ENST00000582955 RAB2AP61019 212 aa9.07□□□□□ -0.96
SMARCE1-218ENST00000582955 UBE2L3P68036 154 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-218ENST00000582955 ICAM4Q14773 271 aa9.07□□□□□ -0.96
SMARCE1-218ENST00000582955 RRN3P1Q2M238 152 aa9.07□□□□□ -0.96
SMARCE1-218ENST00000582955 FAM122CQ6P4D5 195 aa9.07□□□□□ -0.96
SMARCE1-218ENST00000582955 FXYD5Q96DB9 178 aa9.07□□□□□ -0.96
SMARCE1-218ENST00000582955 CELA1Q9UNI1 258 aa9.07□□□□□ -0.96
SMARCE1-218ENST00000582955 TENM2Q9NT68 2774 aa9.07□□□□□ -0.96
SMARCE1-218ENST00000582955 DYNC2H1Q8NCM8 4307 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-218ENST00000582955 NPIPB6E9PJ23 425 aa9.06□□□□□ -0.96
SMARCE1-218ENST00000582955 TSPOP30536 169 aa9.06□□□□□ -0.96
SMARCE1-218ENST00000582955 CDKN1BP46527 198 aa9.06□□□□□ -0.96
SMARCE1-218ENST00000582955 SMCPP49901 116 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-218ENST00000582955 ZNF767PQ75MW2 155 aa9.06□□□□□ -0.96
SMARCE1-218ENST00000582955 RPP25LQ8N5L8 163 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-218ENST00000582955 OR10G4Q8NGN3 311 aa9.06□□□□□ -0.96
SMARCE1-218ENST00000582955 OR10G9Q8NGN4 311 aa9.06□□□□□ -0.96
SMARCE1-218ENST00000582955 OR10G7Q8NGN6 311 aa9.06□□□□□ -0.96
SMARCE1-218ENST00000582955 ZNF503Q96F45 646 aa9.06□□□□□ -0.96
SMARCE1-218ENST00000582955 PHYHIPLQ96FC7 376 aa9.06□□□□□ -0.96
SMARCE1-218ENST00000582955 BORCS7-ASMTA0A0B4J1R7 106 aa9.05□□□□□ -0.96
SMARCE1-218ENST00000582955 ZNF705GA8MUZ8 300 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1-218ENST00000582955 G3V3Q6 166 aa9.05□□□□□ -0.96
SMARCE1-218ENST00000582955 SMLR1H3BR10 107 aa9.05□□□□□ -0.96
SMARCE1-218ENST00000582955 J3KRW8 73 aa9.05□□□□□ -0.96
SMARCE1-218ENST00000582955 ARPC5O15511 151 aa9.05□□□□□ -0.96
SMARCE1-218ENST00000582955 SPART-AS1P0CW21 52 aa9.05□□□□□ -0.96
SMARCE1-218ENST00000582955 ATP6V0CP27449 155 aa9.05□□□□□ -0.96
SMARCE1-218ENST00000582955 LEPP41159 167 aa9.05□□□□□ -0.96
SMARCE1-218ENST00000582955 RANP62826 216 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-218ENST00000582955 RPL7L1Q6DKI1 246 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-218ENST00000582955 Q6ZTC4 211 aa9.05□□□□□ -0.96
SMARCE1-218ENST00000582955 LINC01587Q99440 93 aa9.05□□□□□ -0.96
SMARCE1-218ENST00000582955 PSMG3Q9BT73 122 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1-218ENST00000582955 IGKV2-40A0A087WW87 121 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-218ENST00000582955 C11orf94C9JXX5 98 aa9.04□□□□□ -0.96
SMARCE1-218ENST00000582955 HMGB3O15347 200 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-218ENST00000582955 IGKV2D-40P01614 121 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-218ENST00000582955 PRM2P04554 102 aa9.04□□□□□ -0.96
SMARCE1-218ENST00000582955 CT45A10P0DMU9 189 aa9.04□□□□□ -0.96
SMARCE1-218ENST00000582955 HTN1P15515 57 aa9.04□□□□□ -0.96
SMARCE1-218ENST00000582955 CDC34P49427 236 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-218ENST00000582955 ERCC8Q13216 396 aa9.04□□□□□ -0.96
SMARCE1-218ENST00000582955 TMEM256Q8N2U0 113 aa9.04□□□□□ -0.96
SMARCE1-218ENST00000582955 OR2G3Q8NGZ4 309 aa9.04□□□□□ -0.96
SMARCE1-218ENST00000582955 SH3BGRL3Q9H299 93 aa9.04□□□□□ -0.96
SMARCE1-218ENST00000582955 Q9H3A6 140 aa9.04□□□□□ -0.96
SMARCE1-218ENST00000582955 YTHDF2Q9Y5A9 579 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-218ENST00000582955 TRAV10A0A0B4J240 114 aa9.03□□□□□ -0.96
SMARCE1-218ENST00000582955 MBP02144 154 aa9.03□□□□□ -0.96
SMARCE1-218ENST00000582955 CSN1S1P47710 185 aa9.03□□□□□ -0.96
SMARCE1-218ENST00000582955 KIR3DS1Q14943 382 aa9.03□□□□□ -0.96
SMARCE1-218ENST00000582955 C12orf74Q32Q52 190 aa9.03□□□□□ -0.96
SMARCE1-218ENST00000582955 FAM222AQ5U5X8 452 aa9.03□□□□□ -0.96
SMARCE1-218ENST00000582955 GFI1BQ5VTD9 330 aa9.03□□□□□ -0.96
SMARCE1-218ENST00000582955 PQLC2Q6ZP29 291 aa9.03□□□□□ -0.96
SMARCE1-218ENST00000582955 C2CD4CQ8TF44 421 aa9.03□□□□□ -0.96
SMARCE1-218ENST00000582955 GNPNAT1Q96EK6 184 aaPredicted RBP9.03□□□□□ -0.96
SMARCE1-218ENST00000582955 ODF3Q96PU9 254 aa9.03□□□□□ -0.96
SMARCE1-218ENST00000582955 RYR3Q15413 4870 aa9.03□□□□□ -0.96
SMARCE1-218ENST00000582955 TEX48A0A1B0GUV7 120 aa9.02□□□□□ -0.97
SMARCE1-218ENST00000582955 TAS2R60P59551 318 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms