RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 MANBALQ9NQG1 85 aa7.72□□□□□ -1.17
CCDC47-203ENST00000580986 OTORQ9NRC9 128 aa7.72□□□□□ -1.17
CCDC47-203ENST00000580986 AURKAIP1Q9NWT8 199 aaPredicted RBP7.72□□□□□ -1.17
CCDC47-203ENST00000580986 UBQLN2Q9UHD9 624 aa7.72□□□□□ -1.17
CCDC47-203ENST00000580986 SELENOKQ9Y6D0 94 aa7.72□□□□□ -1.17
CCDC47-203ENST00000580986 SERTM2A0A1B0GWG4 89 aa7.71□□□□□ -1.18
CCDC47-203ENST00000580986 HLA-DRB4P13762 266 aa7.71□□□□□ -1.18
CCDC47-203ENST00000580986 PSMG4Q5JS54 123 aa7.71□□□□□ -1.18
CCDC47-203ENST00000580986 ZNF767PQ75MW2 155 aa7.71□□□□□ -1.18
CCDC47-203ENST00000580986 RXFP4Q8TDU9 374 aa7.71□□□□□ -1.18
CCDC47-203ENST00000580986 BLNKQ8WV28 456 aa7.71□□□□□ -1.18
CCDC47-203ENST00000580986 PRR25Q96S07 402 aa7.71□□□□□ -1.18
CCDC47-203ENST00000580986 TXNDC17Q9BRA2 123 aa7.71□□□□□ -1.18
CCDC47-203ENST00000580986 Q9H3A6 140 aa7.71□□□□□ -1.18
CCDC47-203ENST00000580986 SAV1Q9H4B6 383 aaPredicted RBP7.71□□□□□ -1.18
CCDC47-203ENST00000580986 HLA-DRB4X5D2U9 266 aa7.71□□□□□ -1.18
CCDC47-203ENST00000580986 RBAKDNA6NC62 111 aa7.7□□□□□ -1.18
CCDC47-203ENST00000580986 FAM74A7A6NL05 159 aa7.7□□□□□ -1.18
CCDC47-203ENST00000580986 NDUFS6O75380 124 aaKnown RBP7.7□□□□□ -1.18
CCDC47-203ENST00000580986 EIF3GO75821 320 aaKnown RBP eCLIP7.7□□□□□ -1.18
CCDC47-203ENST00000580986 SLC25A5P05141 298 aaKnown RBP7.7□□□□□ -1.18
CCDC47-203ENST00000580986 FGF8P55075 233 aaPredicted RBP7.7□□□□□ -1.18
CCDC47-203ENST00000580986 RANP62826 216 aaKnown RBP7.7□□□□□ -1.18
CCDC47-203ENST00000580986 ICAM4Q14773 271 aa7.7□□□□□ -1.18
CCDC47-203ENST00000580986 C5orf17Q8NAS9 161 aa7.7□□□□□ -1.18
CCDC47-203ENST00000580986 C20orf173Q96LM9 149 aa7.7□□□□□ -1.18
CCDC47-203ENST00000580986 KIR2DL5BA0A0G2JN68 375 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 KIR2DL5BA0A0G2JPC4 375 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 A0A0J9YX75 114 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 FBLL1A6NHQ2 334 aaKnown RBP7.69□□□□□ -1.18
CCDC47-203ENST00000580986 GGTLC3B5MD39 225 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 H3BTX0 84 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 DUSP14O95147 198 aaKnown RBP7.69□□□□□ -1.18
CCDC47-203ENST00000580986 IGHV4-30-4P0DP06 118 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 CSN1S1P47710 185 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 EBLN2Q6P2I7 272 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 LINC00322Q6ZN03 302 aaPredicted RBP7.69□□□□□ -1.18
CCDC47-203ENST00000580986 TRPT1Q86TN4 253 aaKnown RBP7.69□□□□□ -1.18
CCDC47-203ENST00000580986 CCDC28AQ8IWP9 274 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 IQCF2Q8IXL9 164 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 KIR2DL5AQ8N109 375 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 RNF182Q8N6D2 247 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 ZNF738Q8NE65 137 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 OR8A1Q8NGG7 326 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 KIR2DL5BQ8NHK3 375 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 RPUSD4Q96CM3 377 aaKnown RBP7.69□□□□□ -1.18
CCDC47-203ENST00000580986 LINC00052Q96N35 136 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 ODF3Q96PU9 254 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 SSBP4Q9BWG4 385 aaPredicted RBP7.69□□□□□ -1.18
CCDC47-203ENST00000580986 TMPRSS5Q9H3S3 457 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 PPP1R14DQ9NXH3 145 aa7.69□□□□□ -1.18
CCDC47-203ENST00000580986 TRBV7-9A0A0J9YWB2 115 aa7.68□□□□□ -1.18
CCDC47-203ENST00000580986 PGPA6NDG6 321 aa7.68□□□□□ -1.18
CCDC47-203ENST00000580986 H3BMM0 161 aa7.68□□□□□ -1.18
CCDC47-203ENST00000580986 K7EIL1 84 aa7.68□□□□□ -1.18
CCDC47-203ENST00000580986 M0R3E3 92 aa7.68□□□□□ -1.18
CCDC47-203ENST00000580986 IFNA1P01562 189 aa7.68□□□□□ -1.18
CCDC47-203ENST00000580986 NMBP08949 121 aa7.68□□□□□ -1.18
CCDC47-203ENST00000580986 SNRPCP09234 159 aaKnown RBP7.68□□□□□ -1.18
CCDC47-203ENST00000580986 C9orf47Q6ZRZ4 202 aa7.68□□□□□ -1.18
CCDC47-203ENST00000580986 KRTAP19-1Q8IUB9 90 aa7.68□□□□□ -1.18
CCDC47-203ENST00000580986 APRG1Q8IVJ8 170 aa7.68□□□□□ -1.18
CCDC47-203ENST00000580986 STHQ8IWL8 128 aa7.68□□□□□ -1.18
CCDC47-203ENST00000580986 EXOC3-AS1Q8N2X6 119 aa7.68□□□□□ -1.18
CCDC47-203ENST00000580986 DEFB125Q8N687 156 aa7.68□□□□□ -1.18
CCDC47-203ENST00000580986 CMTM2Q8TAZ6 248 aa7.68□□□□□ -1.18
CCDC47-203ENST00000580986 HIST1H2BAQ96A08 127 aa7.68□□□□□ -1.18
CCDC47-203ENST00000580986 CITED4Q96RK1 184 aa7.68□□□□□ -1.18
CCDC47-203ENST00000580986 YTHDF2Q9Y5A9 579 aaKnown RBP7.68□□□□□ -1.18
CCDC47-203ENST00000580986 NPIPB6E9PJ23 425 aa7.67□□□□□ -1.18
CCDC47-203ENST00000580986 RGS13O14921 159 aa7.67□□□□□ -1.18
CCDC47-203ENST00000580986 HLA-DMBP28068 263 aa7.67□□□□□ -1.18
CCDC47-203ENST00000580986 NUTF2P61970 127 aaKnown RBP7.67□□□□□ -1.18
CCDC47-203ENST00000580986 SUMO1P63165 101 aaKnown RBP7.67□□□□□ -1.18
CCDC47-203ENST00000580986 IFITM2Q01629 132 aa7.67□□□□□ -1.18
CCDC47-203ENST00000580986 IGFL4Q6B9Z1 124 aa7.67□□□□□ -1.18
CCDC47-203ENST00000580986 MORN3Q6PF18 240 aaPredicted RBP7.67□□□□□ -1.18
CCDC47-203ENST00000580986 OR10J6PQ8NGY7 276 aa7.67□□□□□ -1.18
CCDC47-203ENST00000580986 LINC00477Q96M19 166 aa7.67□□□□□ -1.18
CCDC47-203ENST00000580986 ATG101Q9BSB4 218 aa7.67□□□□□ -1.18
CCDC47-203ENST00000580986 KRTAP9-9Q9BYP9 154 aa7.67□□□□□ -1.18
CCDC47-203ENST00000580986 KRTAP9-4Q9BYQ2 154 aa7.67□□□□□ -1.18
CCDC47-203ENST00000580986 WFDC10AQ9H1F0 79 aa7.67□□□□□ -1.18
CCDC47-203ENST00000580986 SRD5A3Q9H8P0 318 aa7.67□□□□□ -1.18
CCDC47-203ENST00000580986 LENEPQ9Y5L5 61 aa7.67□□□□□ -1.18
CCDC47-203ENST00000580986 MEGF8Q7Z7M0 2845 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 LOC102724200A0A096LPH7 203 aaPredicted RBP7.66□□□□□ -1.18
CCDC47-203ENST00000580986 DIRC3C9JPN6 131 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 F6UZH7 168 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 K7EQM0 130 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 PAGE4O60829 102 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 AMBPP02760 352 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 TCRAP04437 139 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 BCL2P10415 239 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 CNN1P51911 297 aaKnown RBP7.66□□□□□ -1.18
CCDC47-203ENST00000580986 APOC4P55056 127 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 RAB14P61106 215 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 CCL20P78556 96 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 ACTL10Q5JWF8 245 aa7.66□□□□□ -1.18
CCDC47-203ENST00000580986 CLLU1Q5K131 121 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms