RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 HSPB11Q9Y547 144 aa11.91□□□□□ -0.5
SREBF1-219ENST00000580540 YTHDF2Q9Y5A9 579 aaKnown RBP11.91□□□□□ -0.5
SREBF1-219ENST00000580540 TIMM9Q9Y5J7 89 aa11.91□□□□□ -0.5
SREBF1-219ENST00000580540 C17orf112F2Z3M2 114 aa11.9□□□□□ -0.5
SREBF1-219ENST00000580540 PTTG1O95997 202 aa11.9□□□□□ -0.5
SREBF1-219ENST00000580540 PYYP10082 97 aa11.9□□□□□ -0.5
SREBF1-219ENST00000580540 HTN1P15515 57 aa11.9□□□□□ -0.5
SREBF1-219ENST00000580540 RPL12P30050 165 aaKnown RBP11.9□□□□□ -0.5
SREBF1-219ENST00000580540 TCTAP57738 103 aa11.9□□□□□ -0.5
SREBF1-219ENST00000580540 LGALS9CQ6DKI2 356 aa11.9□□□□□ -0.5
SREBF1-219ENST00000580540 ATP5SQ99766 215 aa11.9□□□□□ -0.5
SREBF1-219ENST00000580540 KCNIP2Q9NS61 270 aa11.9□□□□□ -0.5
SREBF1-219ENST00000580540 DKK2Q9UBU2 259 aa11.9□□□□□ -0.5
SREBF1-219ENST00000580540 APLNQ9ULZ1 77 aa11.9□□□□□ -0.5
SREBF1-219ENST00000580540 IGHV4-4A0A075B6R2 117 aa11.89□□□□□ -0.51
SREBF1-219ENST00000580540 IFNA5P01569 189 aa11.89□□□□□ -0.51
SREBF1-219ENST00000580540 HIST1H1EP10412 219 aaKnown RBP11.89□□□□□ -0.51
SREBF1-219ENST00000580540 HTN3P15516 51 aa11.89□□□□□ -0.51
SREBF1-219ENST00000580540 MIR17HGQ75NE6 70 aa11.89□□□□□ -0.51
SREBF1-219ENST00000580540 RPP25LQ8N5L8 163 aaKnown RBP11.89□□□□□ -0.51
SREBF1-219ENST00000580540 SCGB1C1Q8TD33 95 aa11.89□□□□□ -0.51
SREBF1-219ENST00000580540 NIPSNAP3BQ9BS92 247 aa11.89□□□□□ -0.51
SREBF1-219ENST00000580540 PARD6GQ9BYG4 376 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-219ENST00000580540 TMEM14CQ9P0S9 112 aa11.89□□□□□ -0.51
SREBF1-219ENST00000580540 TRBV19A0A075B6N1 114 aa11.88□□□□□ -0.51
SREBF1-219ENST00000580540 J3KRW8 73 aa11.88□□□□□ -0.51
SREBF1-219ENST00000580540 CDKN1BP46527 198 aa11.88□□□□□ -0.51
SREBF1-219ENST00000580540 SLC25A2Q9BXI2 301 aa11.88□□□□□ -0.51
SREBF1-219ENST00000580540 MED28Q9H204 178 aa11.88□□□□□ -0.51
SREBF1-219ENST00000580540 TEX48A0A1B0GUV7 120 aa11.87□□□□□ -0.51
SREBF1-219ENST00000580540 TSPOP30536 169 aa11.87□□□□□ -0.51
SREBF1-219ENST00000580540 FFAR4Q5NUL3 377 aa11.87□□□□□ -0.51
SREBF1-219ENST00000580540 M0R3E3 92 aa11.86□□□□□ -0.51
SREBF1-219ENST00000580540 ZNF253O75346 499 aa11.86□□□□□ -0.51
SREBF1-219ENST00000580540 AZU1P20160 251 aa11.86□□□□□ -0.51
SREBF1-219ENST00000580540 DAD1P61803 113 aa11.86□□□□□ -0.51
SREBF1-219ENST00000580540 KIR3DS1Q14943 382 aa11.86□□□□□ -0.51
SREBF1-219ENST00000580540 FCN2Q15485 313 aa11.86□□□□□ -0.51
SREBF1-219ENST00000580540 TMEM256Q8N2U0 113 aa11.86□□□□□ -0.51
SREBF1-219ENST00000580540 EXOC3-AS1Q8N2X6 119 aa11.86□□□□□ -0.51
SREBF1-219ENST00000580540 OR51M1Q9H341 326 aa11.86□□□□□ -0.51
SREBF1-219ENST00000580540 NDUFB4O95168 129 aa11.85□□□□□ -0.51
SREBF1-219ENST00000580540 OR10J4P0C629 311 aa11.85□□□□□ -0.51
SREBF1-219ENST00000580540 CT45A10P0DMU9 189 aa11.85□□□□□ -0.51
SREBF1-219ENST00000580540 FAM167A-AS1Q96KT0 104 aa11.85□□□□□ -0.51
SREBF1-219ENST00000580540 NDUFAF3Q9BU61 184 aa11.85□□□□□ -0.51
SREBF1-219ENST00000580540 PAXXQ9BUH6 204 aa11.85□□□□□ -0.51
SREBF1-219ENST00000580540 MRPL32Q9BYC8 188 aaKnown RBP11.85□□□□□ -0.51
SREBF1-219ENST00000580540 AAMDCQ9H7C9 122 aa11.85□□□□□ -0.51
SREBF1-219ENST00000580540 WFDC1Q9HC57 220 aa11.85□□□□□ -0.51
SREBF1-219ENST00000580540 FUT9Q9Y231 359 aa11.85□□□□□ -0.51
SREBF1-219ENST00000580540 VPS13DQ5THJ4 4388 aa11.85□□□□□ -0.51
SREBF1-219ENST00000580540 OR7C2O60412 319 aa11.84□□□□□ -0.51
SREBF1-219ENST00000580540 NBEAP1P0C6P0 100 aa11.84□□□□□ -0.51
SREBF1-219ENST00000580540 LEPP41159 167 aa11.84□□□□□ -0.51
SREBF1-219ENST00000580540 TAS2R60P59551 318 aa11.84□□□□□ -0.51
SREBF1-219ENST00000580540 ERCC8Q13216 396 aa11.84□□□□□ -0.51
SREBF1-219ENST00000580540 PDE6HQ13956 83 aa11.84□□□□□ -0.51
SREBF1-219ENST00000580540 ICAM4Q14773 271 aa11.84□□□□□ -0.51
SREBF1-219ENST00000580540 FAM122CQ6P4D5 195 aa11.84□□□□□ -0.51
SREBF1-219ENST00000580540 PRELID1Q9Y255 219 aa11.84□□□□□ -0.51
SREBF1-219ENST00000580540 NPIPB6E9PJ23 425 aa11.83□□□□□ -0.52
SREBF1-219ENST00000580540 DEFB130BP0DP73 79 aa11.83□□□□□ -0.52
SREBF1-219ENST00000580540 DEFB130AP0DP74 79 aa11.83□□□□□ -0.52
SREBF1-219ENST00000580540 GFI1BQ5VTD9 330 aa11.83□□□□□ -0.52
SREBF1-219ENST00000580540 RNF141Q8WVD5 230 aa11.83□□□□□ -0.52
SREBF1-219ENST00000580540 MRPL53Q96EL3 112 aaKnown RBP11.83□□□□□ -0.52
SREBF1-219ENST00000580540 TRAV12-3A0A0B4J271 114 aa11.82□□□□□ -0.52
SREBF1-219ENST00000580540 H7BYZ3 331 aa11.82□□□□□ -0.52
SREBF1-219ENST00000580540 EIF3GO75821 320 aaKnown RBP eCLIP11.82□□□□□ -0.52
SREBF1-219ENST00000580540 OXA1LQ15070 435 aa11.82□□□□□ -0.52
SREBF1-219ENST00000580540 FXYD5Q96DB9 178 aa11.82□□□□□ -0.52
SREBF1-219ENST00000580540 EPPK1P58107 5090 aaKnown RBP11.82□□□□□ -0.52
SREBF1-219ENST00000580540 KMT2AQ03164 3969 aa11.81□□□□□ -0.52
SREBF1-219ENST00000580540 LYRM9A8MSI8 78 aa11.81□□□□□ -0.52
SREBF1-219ENST00000580540 CCDC28AQ8IWP9 274 aa11.81□□□□□ -0.52
SREBF1-219ENST00000580540 C16orf74Q96GX8 76 aa11.81□□□□□ -0.52
SREBF1-219ENST00000580540 C20orf144Q9BQM9 153 aa11.81□□□□□ -0.52
SREBF1-219ENST00000580540 AGPAT4-IT1Q9H0P7 198 aa11.81□□□□□ -0.52
SREBF1-219ENST00000580540 IGKV2-40A0A087WW87 121 aaPredicted RBP11.8□□□□□ -0.52
SREBF1-219ENST00000580540 IGKV2D-40P01614 121 aaPredicted RBP11.8□□□□□ -0.52
SREBF1-219ENST00000580540 RANP62826 216 aaKnown RBP11.8□□□□□ -0.52
SREBF1-219ENST00000580540 UBE2L3P68036 154 aaKnown RBP11.8□□□□□ -0.52
SREBF1-219ENST00000580540 PHYHIPLQ96FC7 376 aa11.8□□□□□ -0.52
SREBF1-219ENST00000580540 LINC00477Q96M19 166 aa11.8□□□□□ -0.52
SREBF1-219ENST00000580540 ODF3Q96PU9 254 aa11.8□□□□□ -0.52
SREBF1-219ENST00000580540 PLAC8L1A1L4L8 177 aa11.79□□□□□ -0.52
SREBF1-219ENST00000580540 TAS2R45P59539 299 aa11.79□□□□□ -0.52
SREBF1-219ENST00000580540 ACOT6Q3I5F7 207 aaPredicted RBP11.79□□□□□ -0.52
SREBF1-219ENST00000580540 KHDC3LQ587J8 217 aa11.79□□□□□ -0.52
SREBF1-219ENST00000580540 Q5BKY6 102 aa11.79□□□□□ -0.52
SREBF1-219ENST00000580540 ZNF493Q6ZR52 646 aa11.79□□□□□ -0.52
SREBF1-219ENST00000580540 NOP10Q9NPE3 64 aaKnown RBP11.79□□□□□ -0.52
SREBF1-219ENST00000580540 TIMM8BQ9Y5J9 83 aaPredicted RBP11.79□□□□□ -0.52
SREBF1-219ENST00000580540 A0A1W2PPV4 95 aa11.78□□□□□ -0.52
SREBF1-219ENST00000580540 SLC25A5P05141 298 aaKnown RBP11.78□□□□□ -0.52
SREBF1-219ENST00000580540 RNASE4P34096 147 aaKnown RBP11.78□□□□□ -0.52
SREBF1-219ENST00000580540 CSN1S1P47710 185 aa11.78□□□□□ -0.52
SREBF1-219ENST00000580540 RAB2AP61019 212 aa11.78□□□□□ -0.52
SREBF1-219ENST00000580540 RGS21Q2M5E4 152 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms