RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 SAMD13Q5VXD3 122 aa5.34□□□□□ -1.55
RNF43-204ENST00000580014 LEMD1Q68G75 181 aa5.34□□□□□ -1.55
RNF43-204ENST00000580014 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.34□□□□□ -1.55
RNF43-204ENST00000580014 TCF24Q7RTU0 167 aa5.34□□□□□ -1.55
RNF43-204ENST00000580014 TMEM61Q8N0U2 210 aa5.34□□□□□ -1.55
RNF43-204ENST00000580014 OR8I2Q8N0Y5 310 aa5.34□□□□□ -1.55
RNF43-204ENST00000580014 DCANP1Q8TF63 244 aa5.34□□□□□ -1.55
RNF43-204ENST00000580014 SPAG8Q99932 426 aaPredicted RBP5.34□□□□□ -1.55
RNF43-204ENST00000580014 FAM110AQ9BQ89 295 aa5.34□□□□□ -1.55
RNF43-204ENST00000580014 OR51M1Q9H341 326 aa5.34□□□□□ -1.55
RNF43-204ENST00000580014 SLC25A22Q9H936 323 aa5.34□□□□□ -1.55
RNF43-204ENST00000580014 ANK2Q01484 3957 aa5.34□□□□□ -1.56
RNF43-204ENST00000580014 VWFP04275 2813 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 TRBV19A0A075B6N1 114 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 IGHV3-66A0A0C4DH42 116 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 MAP1LC3B2A6NCE7 125 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 IZUMO1RA6ND01 250 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 GAGE10A6NGK3 116 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 PRSS47A8MTI9 375 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 NDUFB4O95168 129 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 CXorf1O96002 111 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 NBEAP1P0C6P0 100 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 ARL14EPLP0DKL9 152 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 GCHFRP30047 84 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 KPRPQ5T749 579 aaPredicted RBP5.33□□□□□ -1.56
RNF43-204ENST00000580014 LCN12Q6JVE5 192 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 ZNF767PQ75MW2 155 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 LYPD1Q8N2G4 141 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 ARL6IP6Q8N6S5 226 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 FAM213BQ8TBF2 198 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 PAXXQ9BUH6 204 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 MAP1LC3BQ9GZQ8 125 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 MS4A6AQ9H2W1 248 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 NRN1Q9NPD7 142 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 ZNF586Q9NXT0 402 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 CLEC5AQ9NY25 188 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 UBQLN2Q9UHD9 624 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 ZNF256Q9Y2P7 627 aaPredicted RBP5.33□□□□□ -1.56
RNF43-204ENST00000580014 ARL2-SNX15V9GYD0 113 aa5.33□□□□□ -1.56
RNF43-204ENST00000580014 TRAV8-2A0A0B4J237 113 aa5.32□□□□□ -1.56
RNF43-204ENST00000580014 ISLRO14498 428 aa5.32□□□□□ -1.56
RNF43-204ENST00000580014 HBE1P02100 147 aa5.32□□□□□ -1.56
RNF43-204ENST00000580014 NMBP08949 121 aa5.32□□□□□ -1.56
RNF43-204ENST00000580014 PYYP10082 97 aa5.32□□□□□ -1.56
RNF43-204ENST00000580014 PSMB3P49720 205 aa5.32□□□□□ -1.56
RNF43-204ENST00000580014 ANXA2RQ3ZCQ2 193 aa5.32□□□□□ -1.56
RNF43-204ENST00000580014 LCN15Q6UWW0 184 aa5.32□□□□□ -1.56
RNF43-204ENST00000580014 RBPMS2Q6ZRY4 209 aaKnown RBP5.32□□□□□ -1.56
RNF43-204ENST00000580014 DYNLRB2Q8TF09 96 aa5.32□□□□□ -1.56
RNF43-204ENST00000580014 C2CD4CQ8TF44 421 aa5.32□□□□□ -1.56
RNF43-204ENST00000580014 SFT2D1Q8WV19 159 aa5.32□□□□□ -1.56
RNF43-204ENST00000580014 ZNF331Q9NQX6 463 aaPredicted RBP5.32□□□□□ -1.56
RNF43-204ENST00000580014 TMEM167BQ9NRX6 74 aa5.32□□□□□ -1.56
RNF43-204ENST00000580014 A0A1W2PRE2 83 aa5.31□□□□□ -1.56
RNF43-204ENST00000580014 PGPEP1LA6NFU8 196 aa5.31□□□□□ -1.56
RNF43-204ENST00000580014 OR4C46A6NHA9 309 aa5.31□□□□□ -1.56
RNF43-204ENST00000580014 ZNF705EA8MWA4 302 aaPredicted RBP5.31□□□□□ -1.56
RNF43-204ENST00000580014 HMGB3O15347 200 aaKnown RBP5.31□□□□□ -1.56
RNF43-204ENST00000580014 OR7C2O60412 319 aa5.31□□□□□ -1.56
RNF43-204ENST00000580014 NDUFS6O75380 124 aaKnown RBP5.31□□□□□ -1.56
RNF43-204ENST00000580014 EIF3GO75821 320 aaKnown RBP eCLIP5.31□□□□□ -1.56
RNF43-204ENST00000580014 PPT1P50897 306 aa5.31□□□□□ -1.56
RNF43-204ENST00000580014 CMC4P56277 68 aaPredicted RBP5.31□□□□□ -1.56
RNF43-204ENST00000580014 KRTAP10-2P60368 255 aa5.31□□□□□ -1.56
RNF43-204ENST00000580014 UBE2L3P68036 154 aaKnown RBP5.31□□□□□ -1.56
RNF43-204ENST00000580014 PAFAH1B2P68402 229 aa5.31□□□□□ -1.56
RNF43-204ENST00000580014 CCL20P78556 96 aa5.31□□□□□ -1.56
RNF43-204ENST00000580014 CLLU1Q5K131 121 aa5.31□□□□□ -1.56
RNF43-204ENST00000580014 MRPL53Q96EL3 112 aaKnown RBP5.31□□□□□ -1.56
RNF43-204ENST00000580014 SLC50A1Q9BRV3 221 aa5.31□□□□□ -1.56
RNF43-204ENST00000580014 TMPRSS5Q9H3S3 457 aa5.31□□□□□ -1.56
RNF43-204ENST00000580014 ZMAT5Q9UDW3 170 aaKnown RBP5.31□□□□□ -1.56
RNF43-204ENST00000580014 NOTCH3Q9UM47 2321 aa5.31□□□□□ -1.56
RNF43-204ENST00000580014 A8MTW9 85 aa5.3□□□□□ -1.56
RNF43-204ENST00000580014 TEX46H3BTG2 121 aa5.3□□□□□ -1.56
RNF43-204ENST00000580014 SLC17A3O00476 420 aa5.3□□□□□ -1.56
RNF43-204ENST00000580014 OR10J4P0C629 311 aa5.3□□□□□ -1.56
RNF43-204ENST00000580014 FGF8P55075 233 aaPredicted RBP5.3□□□□□ -1.56
RNF43-204ENST00000580014 KRTAP10-11P60412 298 aa5.3□□□□□ -1.56
RNF43-204ENST00000580014 PSG9Q00887 426 aa5.3□□□□□ -1.56
RNF43-204ENST00000580014 PSG3Q16557 428 aa5.3□□□□□ -1.56
RNF43-204ENST00000580014 ODF3L2Q3SX64 289 aa5.3□□□□□ -1.56
RNF43-204ENST00000580014 CFAP161Q6P656 301 aa5.3□□□□□ -1.56
RNF43-204ENST00000580014 FAM24BQ8N5W8 94 aa5.3□□□□□ -1.56
RNF43-204ENST00000580014 NKX6-2Q9C056 277 aaPredicted RBP5.3□□□□□ -1.56
RNF43-204ENST00000580014 PRELID1Q9Y255 219 aa5.3□□□□□ -1.56
RNF43-204ENST00000580014 FAM74A7A6NL05 159 aa5.29□□□□□ -1.56
RNF43-204ENST00000580014 DNASE2O00115 360 aaPredicted RBP5.29□□□□□ -1.56
RNF43-204ENST00000580014 TAGLN2P37802 199 aaKnown RBP5.29□□□□□ -1.56
RNF43-204ENST00000580014 ID1P41134 155 aa5.29□□□□□ -1.56
RNF43-204ENST00000580014 SUMO4Q6EEV6 95 aa5.29□□□□□ -1.56
RNF43-204ENST00000580014 Q8N1X5 172 aa5.29□□□□□ -1.56
RNF43-204ENST00000580014 GBGT1Q8N5D6 347 aa5.29□□□□□ -1.56
RNF43-204ENST00000580014 TXNDC17Q9BRA2 123 aa5.29□□□□□ -1.56
RNF43-204ENST00000580014 TCEAL7Q9BRU2 100 aa5.29□□□□□ -1.56
RNF43-204ENST00000580014 Q9H3A6 140 aa5.29□□□□□ -1.56
RNF43-204ENST00000580014 MANBALQ9NQG1 85 aa5.29□□□□□ -1.56
RNF43-204ENST00000580014 OTORQ9NRC9 128 aa5.29□□□□□ -1.56
RNF43-204ENST00000580014 MED9Q9NWA0 146 aa5.29□□□□□ -1.56
RNF43-204ENST00000580014 YTHDF2Q9Y5A9 579 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms