RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 KIR3DS1Q14943 382 aa8.28□□□□□ -1.08
CDK5RAP3-216ENST00000579853 MRPL23Q16540 153 aaKnown RBP8.28□□□□□ -1.08
CDK5RAP3-216ENST00000579853 SPANXN5Q5MJ07 72 aa8.28□□□□□ -1.08
CDK5RAP3-216ENST00000579853 PXDC1Q5TGL8 231 aa8.28□□□□□ -1.08
CDK5RAP3-216ENST00000579853 C10orf126Q8N4M7 172 aa8.28□□□□□ -1.08
CDK5RAP3-216ENST00000579853 LINC00467Q9BRT7 94 aa8.28□□□□□ -1.08
CDK5RAP3-216ENST00000579853 PRO0255Q9UI72 69 aa8.28□□□□□ -1.08
CDK5RAP3-216ENST00000579853 TRGV1A0A0A0MS02 117 aa8.27□□□□□ -1.09
CDK5RAP3-216ENST00000579853 TRAV12-3A0A0B4J271 114 aa8.27□□□□□ -1.09
CDK5RAP3-216ENST00000579853 CTDSPLO15194 276 aa8.27□□□□□ -1.09
CDK5RAP3-216ENST00000579853 TMEM128Q5BJH2 165 aa8.27□□□□□ -1.09
CDK5RAP3-216ENST00000579853 LYPD5Q6UWN5 251 aa8.27□□□□□ -1.09
CDK5RAP3-216ENST00000579853 NEGR1Q7Z3B1 354 aa8.27□□□□□ -1.09
CDK5RAP3-216ENST00000579853 BPIFA4PQ86YQ2 179 aa8.27□□□□□ -1.09
CDK5RAP3-216ENST00000579853 ZBTB8BQ8NAP8 495 aaPredicted RBP8.27□□□□□ -1.09
CDK5RAP3-216ENST00000579853 PXMP4Q9Y6I8 212 aa8.27□□□□□ -1.09
CDK5RAP3-216ENST00000579853 ANKRD20A5PA0PJZ0 165 aa8.26□□□□□ -1.09
CDK5RAP3-216ENST00000579853 MRPS12O15235 138 aaKnown RBP8.26□□□□□ -1.09
CDK5RAP3-216ENST00000579853 RGS5O15539 181 aa8.26□□□□□ -1.09
CDK5RAP3-216ENST00000579853 C1QBP02746 253 aa8.26□□□□□ -1.09
CDK5RAP3-216ENST00000579853 SLC25A5P05141 298 aaKnown RBP8.26□□□□□ -1.09
CDK5RAP3-216ENST00000579853 ANXA2RQ3ZCQ2 193 aa8.26□□□□□ -1.09
CDK5RAP3-216ENST00000579853 LRTM2Q8N967 370 aa8.26□□□□□ -1.09
CDK5RAP3-216ENST00000579853 ZNF431Q8TF32 576 aaPredicted RBP8.26□□□□□ -1.09
CDK5RAP3-216ENST00000579853 DEFB104AQ8WTQ1 72 aa8.26□□□□□ -1.09
CDK5RAP3-216ENST00000579853 ST6GAL2Q96JF0 529 aa8.26□□□□□ -1.09
CDK5RAP3-216ENST00000579853 PARD6GQ9BYG4 376 aaPredicted RBP8.26□□□□□ -1.09
CDK5RAP3-216ENST00000579853 ARL6Q9H0F7 186 aa8.26□□□□□ -1.09
CDK5RAP3-216ENST00000579853 ARV1Q9H2C2 271 aa8.26□□□□□ -1.09
CDK5RAP3-216ENST00000579853 GSN-AS1Q9NRJ2 163 aa8.26□□□□□ -1.09
CDK5RAP3-216ENST00000579853 J3KRW8 73 aa8.25□□□□□ -1.09
CDK5RAP3-216ENST00000579853 K7EPK0 472 aa8.25□□□□□ -1.09
CDK5RAP3-216ENST00000579853 PSCAO43653 123 aa8.25□□□□□ -1.09
CDK5RAP3-216ENST00000579853 EIF4E3Q8N5X7 224 aaKnown RBP8.25□□□□□ -1.09
CDK5RAP3-216ENST00000579853 NPVFQ9HCQ7 196 aa8.25□□□□□ -1.09
CDK5RAP3-216ENST00000579853 MCUBQ9NWR8 336 aa8.25□□□□□ -1.09
CDK5RAP3-216ENST00000579853 HHLA3Q9XRX5 114 aa8.25□□□□□ -1.09
CDK5RAP3-216ENST00000579853 FAT3Q8TDW7 4589 aa8.24□□□□□ -1.09
CDK5RAP3-216ENST00000579853 FNDC10F2Z333 226 aa8.24□□□□□ -1.09
CDK5RAP3-216ENST00000579853 H3BP45 60 aa8.24□□□□□ -1.09
CDK5RAP3-216ENST00000579853 SPINK4O60575 86 aa8.24□□□□□ -1.09
CDK5RAP3-216ENST00000579853 CT45A10P0DMU9 189 aa8.24□□□□□ -1.09
CDK5RAP3-216ENST00000579853 CRYBA4P53673 196 aa8.24□□□□□ -1.09
CDK5RAP3-216ENST00000579853 HAMPP81172 84 aa8.24□□□□□ -1.09
CDK5RAP3-216ENST00000579853 IL18Q14116 193 aa8.24□□□□□ -1.09
CDK5RAP3-216ENST00000579853 LINC00305Q7Z4B0 112 aa8.24□□□□□ -1.09
CDK5RAP3-216ENST00000579853 C11orf72Q8NBR9 251 aa8.24□□□□□ -1.09
CDK5RAP3-216ENST00000579853 VGLL1Q99990 258 aa8.24□□□□□ -1.09
CDK5RAP3-216ENST00000579853 MIXL1Q9H2W2 232 aa8.24□□□□□ -1.09
CDK5RAP3-216ENST00000579853 C7orf71A4D174 169 aa8.23□□□□□ -1.09
CDK5RAP3-216ENST00000579853 PRAC2D3DTV9 90 aa8.23□□□□□ -1.09
CDK5RAP3-216ENST00000579853 GOSR2O14653 212 aa8.23□□□□□ -1.09
CDK5RAP3-216ENST00000579853 CRYGDP07320 174 aa8.23□□□□□ -1.09
CDK5RAP3-216ENST00000579853 PRB4P10163 310 aaPredicted RBP8.23□□□□□ -1.09
CDK5RAP3-216ENST00000579853 SRIP30626 198 aa8.23□□□□□ -1.09
CDK5RAP3-216ENST00000579853 TCL1AP56279 114 aa8.23□□□□□ -1.09
CDK5RAP3-216ENST00000579853 POLR2GP62487 172 aaKnown RBP eCLIP8.23□□□□□ -1.09
CDK5RAP3-216ENST00000579853 GUK1Q16774 197 aa8.23□□□□□ -1.09
CDK5RAP3-216ENST00000579853 IBA57Q5T440 356 aaKnown RBP8.23□□□□□ -1.09
CDK5RAP3-216ENST00000579853 TEPPQ6URK8 271 aa8.23□□□□□ -1.09
CDK5RAP3-216ENST00000579853 PATE2Q6UY27 113 aa8.23□□□□□ -1.09
CDK5RAP3-216ENST00000579853 TRAV5A0A0B4J249 113 aa8.22□□□□□ -1.09
CDK5RAP3-216ENST00000579853 PRAF2O60831 178 aa8.22□□□□□ -1.09
CDK5RAP3-216ENST00000579853 VAMP1P23763 118 aa8.22□□□□□ -1.09
CDK5RAP3-216ENST00000579853 FAUP35544 74 aaKnown RBP8.22□□□□□ -1.09
CDK5RAP3-216ENST00000579853 CTF1Q16619 201 aa8.22□□□□□ -1.09
CDK5RAP3-216ENST00000579853 ZNF546Q86UE3 836 aa8.22□□□□□ -1.09
CDK5RAP3-216ENST00000579853 WFDC10BQ8IUB3 73 aa8.22□□□□□ -1.09
CDK5RAP3-216ENST00000579853 PCNPQ8WW12 178 aaKnown RBP8.22□□□□□ -1.09
CDK5RAP3-216ENST00000579853 DIRAS2Q96HU8 199 aa8.22□□□□□ -1.09
CDK5RAP3-216ENST00000579853 MRPL32Q9BYC8 188 aaKnown RBP8.22□□□□□ -1.09
CDK5RAP3-216ENST00000579853 PSENENQ9NZ42 101 aa8.22□□□□□ -1.09
CDK5RAP3-216ENST00000579853 MGAT4CQ9UBM8 478 aa8.22□□□□□ -1.09
CDK5RAP3-216ENST00000579853 RSL24D1Q9UHA3 163 aaKnown RBP8.22□□□□□ -1.09
CDK5RAP3-216ENST00000579853 LINC00854A0A1B0GVQ3 168 aa8.21□□□□□ -1.1
CDK5RAP3-216ENST00000579853 SLC17A3O00476 420 aa8.21□□□□□ -1.1
CDK5RAP3-216ENST00000579853 CTDSP2O14595 271 aa8.21□□□□□ -1.1
CDK5RAP3-216ENST00000579853 COX7A2P2O60397 106 aa8.21□□□□□ -1.1
CDK5RAP3-216ENST00000579853 MPDU1O75352 247 aa8.21□□□□□ -1.1
CDK5RAP3-216ENST00000579853 ORM1P02763 201 aa8.21□□□□□ -1.1
CDK5RAP3-216ENST00000579853 SAT2Q96F10 170 aaPredicted RBP8.21□□□□□ -1.1
CDK5RAP3-216ENST00000579853 C8orf49Q96NF6 230 aa8.21□□□□□ -1.1
CDK5RAP3-216ENST00000579853 KLF12Q9Y4X4 402 aa8.21□□□□□ -1.1
CDK5RAP3-216ENST00000579853 LRCOL1A6NCL2 159 aa8.2□□□□□ -1.1
CDK5RAP3-216ENST00000579853 KLLNB2CW77 178 aa8.2□□□□□ -1.1
CDK5RAP3-216ENST00000579853 K7EQD1 137 aa8.2□□□□□ -1.1
CDK5RAP3-216ENST00000579853 ZNF253O75346 499 aa8.2□□□□□ -1.1
CDK5RAP3-216ENST00000579853 IGHV3-53P01767 116 aa8.2□□□□□ -1.1
CDK5RAP3-216ENST00000579853 NMBP08949 121 aa8.2□□□□□ -1.1
CDK5RAP3-216ENST00000579853 HOXB5P09067 269 aa8.2□□□□□ -1.1
CDK5RAP3-216ENST00000579853 SNRPCP09234 159 aaKnown RBP8.2□□□□□ -1.1
CDK5RAP3-216ENST00000579853 IGLC2P0DOY2 106 aa8.2□□□□□ -1.1
CDK5RAP3-216ENST00000579853 ID3Q02535 119 aa8.2□□□□□ -1.1
CDK5RAP3-216ENST00000579853 FHL2Q14192 279 aa8.2□□□□□ -1.1
CDK5RAP3-216ENST00000579853 Q8N814 137 aa8.2□□□□□ -1.1
CDK5RAP3-216ENST00000579853 OR10P1Q8NGE3 313 aa8.2□□□□□ -1.1
CDK5RAP3-216ENST00000579853 MRPL53Q96EL3 112 aaKnown RBP8.2□□□□□ -1.1
CDK5RAP3-216ENST00000579853 LINC00477Q96M19 166 aa8.2□□□□□ -1.1
CDK5RAP3-216ENST00000579853 TXNDC17Q9BRA2 123 aa8.2□□□□□ -1.1
CDK5RAP3-216ENST00000579853 PLA2G2DQ9UNK4 145 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms