RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 CYTL1Q9NRR1 136 aa4.76□□□□□ -1.65
COPS3-216ENST00000579716 IFT172Q9UG01 1749 aa4.76□□□□□ -1.65
COPS3-216ENST00000579716 NWD2Q9ULI1 1742 aa4.76□□□□□ -1.65
COPS3-216ENST00000579716 LY96Q9Y6Y9 160 aa4.76□□□□□ -1.65
COPS3-216ENST00000579716 KCPQ6ZWJ8 1503 aa4.76□□□□□ -1.65
COPS3-216ENST00000579716 XRN1Q8IZH2 1706 aaKnown RBP4.75□□□□□ -1.65
COPS3-216ENST00000579716 DOCK4Q8N1I0 1966 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 IGLV3-10A0A075B6K4 115 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 TRAV2A0A0B4J234 112 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 TRAV1-1A0A0B4J248 108 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 PIGBOS1A0A0B4J2F0 54 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 A0A0G2JND7 137 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 MDFIC2A0A1B0GVS7 189 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 NUPR1O60356 82 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 IGHV3-7P01780 117 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 HOXB6P17509 224 aaKnown RBP4.75□□□□□ -1.65
COPS3-216ENST00000579716 BLCAPP62952 87 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 IGFBP7Q16270 282 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 RSPO1Q2MKA7 263 aaPredicted RBP4.75□□□□□ -1.65
COPS3-216ENST00000579716 MPV17LQ2QL34 196 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 PDPNQ86YL7 162 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 SERP2Q8N6R1 65 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 Q8N976 141 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 TRGV9Q99603 122 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 MYLKQ15746 1914 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 RGPD3A6NKT7 1758 aaPredicted RBP4.75□□□□□ -1.65
COPS3-216ENST00000579716 LAMB1P07942 1786 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 SCN2AQ99250 2005 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 RALGAPA2Q2PPJ7 1873 aa4.75□□□□□ -1.65
COPS3-216ENST00000579716 CEP170BQ9Y4F5 1589 aaPredicted RBP4.74□□□□□ -1.65
COPS3-216ENST00000579716 ZNF142P52746 1687 aaPredicted RBP4.74□□□□□ -1.65
COPS3-216ENST00000579716 EDC4Q6P2E9 1401 aaKnown RBP4.74□□□□□ -1.65
COPS3-216ENST00000579716 IGKV6D-21A0A0A0MT36 114 aa4.74□□□□□ -1.65
COPS3-216ENST00000579716 A0A1W2PS18 150 aa4.74□□□□□ -1.65
COPS3-216ENST00000579716 LINC01548A6NM66 108 aa4.74□□□□□ -1.65
COPS3-216ENST00000579716 CHTF8P0CG12 524 aa4.74□□□□□ -1.65
COPS3-216ENST00000579716 PTHLHP12272 177 aa4.74□□□□□ -1.65
COPS3-216ENST00000579716 ZNF32P17041 273 aa4.74□□□□□ -1.65
COPS3-216ENST00000579716 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
COPS3-216ENST00000579716 DEFB107AQ8IZN7 70 aa4.74□□□□□ -1.65
COPS3-216ENST00000579716 DAND5Q8N907 189 aa4.74□□□□□ -1.65
COPS3-216ENST00000579716 RNASE6Q93091 150 aaKnown RBP4.74□□□□□ -1.65
COPS3-216ENST00000579716 FAM104AQ969W3 186 aa4.74□□□□□ -1.65
COPS3-216ENST00000579716 ZNF581Q9P0T4 197 aa4.74□□□□□ -1.65
COPS3-216ENST00000579716 MYO10Q9HD67 2058 aa4.74□□□□□ -1.65
COPS3-216ENST00000579716 CCDC88CQ9P219 2028 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 MROH2AA6NES4 1674 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 KIDINS220Q9ULH0 1771 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 PLXNA4Q9HCM2 1894 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 DYSFO75923 2080 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 ADCY10Q96PN6 1610 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 RGPD1P0DJD0 1748 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 CDC42BPBQ9Y5S2 1711 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 TRAV17A0A0B4J275 112 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 K7EM74 188 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 SOCS2O14508 198 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 SAA1P0DJI8 122 aaPredicted RBP4.73□□□□□ -1.65
COPS3-216ENST00000579716 CD28P10747 220 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 CCL4P13236 92 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 SNRPFP62306 86 aaKnown RBP4.73□□□□□ -1.65
COPS3-216ENST00000579716 RPL18Q07020 188 aaKnown RBP4.73□□□□□ -1.65
COPS3-216ENST00000579716 BSPH1Q075Z2 132 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 SS18Q15532 418 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 PSMG4Q5JS54 123 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.73□□□□□ -1.65
COPS3-216ENST00000579716 CFAP126Q5VTH2 177 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 NOXRED1Q6NXP6 359 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 ATP11AUNQ6ZP68 121 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 SPATA12Q7Z6I5 190 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 FAM216BQ8N7L0 139 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.73□□□□□ -1.65
COPS3-216ENST00000579716 Q8N8P6 123 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 Q9H3A6 140 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 XAGE1AQ9HD64 81 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 ROBO1Q9Y6N7 1651 aa4.73□□□□□ -1.65
COPS3-216ENST00000579716 MIA3Q5JRA6 1907 aa4.72□□□□□ -1.65
COPS3-216ENST00000579716 RAI1Q7Z5J4 1906 aaPredicted RBP4.72□□□□□ -1.65
COPS3-216ENST00000579716 IGHV4-4A0A075B6R2 117 aa4.72□□□□□ -1.65
COPS3-216ENST00000579716 IGHV3OR15-7A0A075B7D8 119 aa4.72□□□□□ -1.65
COPS3-216ENST00000579716 BMPR1BO00238 502 aa4.72□□□□□ -1.65
COPS3-216ENST00000579716 NTN3O00634 580 aaPredicted RBP4.72□□□□□ -1.65
COPS3-216ENST00000579716 ACYP1P07311 99 aa4.72□□□□□ -1.65
COPS3-216ENST00000579716 PIPP12273 146 aaPredicted RBP4.72□□□□□ -1.65
COPS3-216ENST00000579716 CKS2P33552 79 aa4.72□□□□□ -1.65
COPS3-216ENST00000579716 CRIP2P52943 208 aaPredicted RBP4.72□□□□□ -1.65
COPS3-216ENST00000579716 CYCSP99999 105 aaKnown RBP4.72□□□□□ -1.65
COPS3-216ENST00000579716 FAM53AQ6NSI3 398 aaPredicted RBP4.72□□□□□ -1.65
COPS3-216ENST00000579716 MIR17HGQ75NE6 70 aa4.72□□□□□ -1.65
COPS3-216ENST00000579716 ITLN1Q8WWA0 313 aa4.72□□□□□ -1.65
COPS3-216ENST00000579716 ITLN2Q8WWU7 325 aaPredicted RBP4.72□□□□□ -1.65
COPS3-216ENST00000579716 AQP3Q92482 292 aa4.72□□□□□ -1.65
COPS3-216ENST00000579716 RPL36ALQ969Q0 106 aaKnown RBP4.72□□□□□ -1.65
COPS3-216ENST00000579716 ATXN7L3BQ96GX2 97 aa4.72□□□□□ -1.65
COPS3-216ENST00000579716 OR8B2Q96RD0 313 aa4.72□□□□□ -1.65
COPS3-216ENST00000579716 UPK3BQ9BT76 320 aa4.72□□□□□ -1.65
COPS3-216ENST00000579716 NXT2Q9NPJ8 142 aaKnown RBP4.72□□□□□ -1.65
COPS3-216ENST00000579716 SAMD9Q5K651 1589 aa4.72□□□□□ -1.65
COPS3-216ENST00000579716 SCN5AQ14524 2016 aa4.72□□□□□ -1.65
COPS3-216ENST00000579716 MYO18AQ92614 2054 aaKnown RBP4.71□□□□□ -1.65
COPS3-216ENST00000579716 MED1Q15648 1581 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms