RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 SMIM6P0DI80 62 aa8.11□□□□□ -1.11
MSI2-209ENST00000579483 RIPPLY3P57055 190 aa8.11□□□□□ -1.11
MSI2-209ENST00000579483 LINC00205P59089 165 aa8.11□□□□□ -1.11
MSI2-209ENST00000579483 SRSF2Q01130 221 aaKnown RBP8.11□□□□□ -1.11
MSI2-209ENST00000579483 TRPT1Q86TN4 253 aaKnown RBP8.11□□□□□ -1.11
MSI2-209ENST00000579483 MRAPQ8TCY5 172 aa8.11□□□□□ -1.11
MSI2-209ENST00000579483 PAM16Q9Y3D7 125 aa8.11□□□□□ -1.11
MSI2-209ENST00000579483 SPINK13Q1W4C9 94 aa8.11□□□□□ -1.11
MSI2-209ENST00000579483 KIAA2026Q5HYC2 2103 aa8.11□□□□□ -1.11
MSI2-209ENST00000579483 CARHSP1Q9Y2V2 147 aaKnown RBP8.11□□□□□ -1.11
MSI2-209ENST00000579483 KLK5Q9Y337 293 aaPredicted RBP8.11□□□□□ -1.11
MSI2-209ENST00000579483 AZU1P20160 251 aa8.1□□□□□ -1.11
MSI2-209ENST00000579483 TMEM75Q8N9X5 138 aa8.1□□□□□ -1.11
MSI2-209ENST00000579483 OCC1Q8TAD7 63 aa8.1□□□□□ -1.11
MSI2-209ENST00000579483 TRBV7-9A0A0J9YWB2 115 aa8.1□□□□□ -1.11
MSI2-209ENST00000579483 H7C2G1 150 aa8.1□□□□□ -1.11
MSI2-209ENST00000579483 RASL10AQ92737 203 aa8.1□□□□□ -1.11
MSI2-209ENST00000579483 TEX43Q6ZNM6 134 aa8.1□□□□□ -1.11
MSI2-209ENST00000579483 SH2D6Q7Z4S9 175 aa8.1□□□□□ -1.11
MSI2-209ENST00000579483 LAMTOR2Q9Y2Q5 125 aa8.1□□□□□ -1.11
MSI2-209ENST00000579483 A8MXK9 166 aa8.1□□□□□ -1.11
MSI2-209ENST00000579483 Q6ZSR3 168 aa8.1□□□□□ -1.11
MSI2-209ENST00000579483 SMAD5-AS1Q9Y6J3 95 aa8.1□□□□□ -1.11
MSI2-209ENST00000579483 TRBV25-1A0A075B6N4 114 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 RNASE1P07998 156 aaKnown RBP8.09□□□□□ -1.11
MSI2-209ENST00000579483 ZNF493Q6ZR52 646 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 LINC00469Q8N7U9 141 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 WFDC1Q9HC57 220 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 NCOR2Q9Y618 2525 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 H3BRN7 92 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 ZNF134P52741 427 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 WT1-ASQ06250 92 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 LAGE3Q14657 143 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 RPP25LQ8N5L8 163 aaKnown RBP8.09□□□□□ -1.11
MSI2-209ENST00000579483 Q8TAT8 98 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 TRBV19A0A075B6N1 114 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 LOC107984156A0A0G2JMH3 177 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 PFN1P07737 140 aaKnown RBP8.09□□□□□ -1.11
MSI2-209ENST00000579483 Q6ZRM9 215 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 C5orf24Q7Z6I8 188 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 ARL17AQ8IVW1 177 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 MRPL53Q96EL3 112 aaKnown RBP8.09□□□□□ -1.11
MSI2-209ENST00000579483 HEATR5AQ86XA9 2040 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 ADAMTS9Q9P2N4 1935 aa8.09□□□□□ -1.11
MSI2-209ENST00000579483 YLPM1P49750 1951 aaKnown RBP8.09□□□□□ -1.11
MSI2-209ENST00000579483 IGHV3-73A0A0B4J1V6 119 aa8.09□□□□□ -1.12
MSI2-209ENST00000579483 GNB1LQ9BYB4 327 aa8.09□□□□□ -1.12
MSI2-209ENST00000579483 UQCR10Q9UDW1 63 aa8.09□□□□□ -1.12
MSI2-209ENST00000579483 SPG11Q96JI7 2443 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 C19orf84I3L1E1 186 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 GUSBP1Q15486 140 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 SIRPDQ9H106 197 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 MED13LQ71F56 2210 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 A0A0G2JRQ6 117 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 LYZL1Q6UWQ5 148 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 NDUFA11Q86Y39 141 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 THAP8Q8NA92 274 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 MS4A6AQ9H2W1 248 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 LIME1Q9H400 295 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 A0A1B0GW64 132 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 SPATA45Q537H7 98 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 Q86TA4 180 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 PYGO2Q9BRQ0 406 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 GAGE12BA1L429 117 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 DNAJC9-AS1A6NH13 148 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 GAGE7O76087 117 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 IGLC1P0CG04 106 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 GAGE12FP0CL80 117 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 GAGE12GP0CL81 117 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 GAGE12IP0CL82 117 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 SPART-AS1P0CW21 52 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 EVI2AP22794 236 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 PLNP26678 52 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 C5orf56Q8N8D9 126 aa8.08□□□□□ -1.12
MSI2-209ENST00000579483 CHCHD1Q96BP2 118 aaKnown RBP8.08□□□□□ -1.12
MSI2-209ENST00000579483 PTPN13Q12923 2485 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 IGHV4-31P0DP07 118 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 MLANAQ16655 118 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 PIFOQ8TCI5 191 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 C4orf3Q8WVX3 66 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 LENEPQ9Y5L5 61 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 IGHV7-81A0A0B4J1V7 117 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 ARMS2P0C7Q2 107 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 SRSF4Q08170 494 aaKnown RBP8.07□□□□□ -1.12
MSI2-209ENST00000579483 VWC2Q2TAL6 325 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 C6orf226Q5I0X4 101 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 WIPF2Q8TF74 440 aaPredicted RBP8.07□□□□□ -1.12
MSI2-209ENST00000579483 IGHG2P01859 326 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 TCTAP57738 103 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 OR2K2Q8NGT1 345 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 GFRA4Q9GZZ7 299 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 VSIRQ9H7M9 311 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 ZNF561-AS1K7EIQ3 104 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 K7EMT4 169 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 PAX4O43316 350 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 DPM2O94777 84 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 WFDC11Q8NEX6 87 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 IGFBPL1Q8WX77 278 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 C1orf159Q96HA4 380 aa8.07□□□□□ -1.12
MSI2-209ENST00000579483 PRO1933Q9H354 126 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms