RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 PARD6GQ9BYG4 376 aaPredicted RBP12.62□□□□□ -0.39
ITGB4-205ENST00000579211 WFDC1Q9HC57 220 aa12.62□□□□□ -0.39
ITGB4-205ENST00000579211 A0A1W2PPV4 95 aa12.61□□□□□ -0.39
ITGB4-205ENST00000579211 C11orf94C9JXX5 98 aa12.61□□□□□ -0.39
ITGB4-205ENST00000579211 TSPOP30536 169 aa12.61□□□□□ -0.39
ITGB4-205ENST00000579211 TAS2R45P59539 299 aa12.61□□□□□ -0.39
ITGB4-205ENST00000579211 PDE6HQ13956 83 aa12.61□□□□□ -0.39
ITGB4-205ENST00000579211 ACOT6Q3I5F7 207 aaPredicted RBP12.61□□□□□ -0.39
ITGB4-205ENST00000579211 C1orf158Q8N1D5 194 aa12.61□□□□□ -0.39
ITGB4-205ENST00000579211 C2CD4CQ8TF44 421 aa12.61□□□□□ -0.39
ITGB4-205ENST00000579211 PRELID1Q9Y255 219 aa12.61□□□□□ -0.39
ITGB4-205ENST00000579211 FXYD6-FXYD2A0A087WZ82 144 aa12.6□□□□□ -0.39
ITGB4-205ENST00000579211 LOC102723971A0A1B0GUV8 181 aa12.6□□□□□ -0.39
ITGB4-205ENST00000579211 PRAC2D3DTV9 90 aa12.6□□□□□ -0.39
ITGB4-205ENST00000579211 OR10J4P0C629 311 aa12.6□□□□□ -0.39
ITGB4-205ENST00000579211 NBEAP1P0C6P0 100 aa12.6□□□□□ -0.39
ITGB4-205ENST00000579211 SPART-AS1P0CW21 52 aa12.6□□□□□ -0.39
ITGB4-205ENST00000579211 CDKN1BP46527 198 aa12.6□□□□□ -0.39
ITGB4-205ENST00000579211 BAP18Q8IXM2 172 aa12.6□□□□□ -0.39
ITGB4-205ENST00000579211 OR2T35Q8NGX2 323 aa12.6□□□□□ -0.39
ITGB4-205ENST00000579211 RNF141Q8WVD5 230 aa12.6□□□□□ -0.39
ITGB4-205ENST00000579211 AQP10Q96PS8 301 aa12.6□□□□□ -0.39
ITGB4-205ENST00000579211 LINC01587Q99440 93 aa12.6□□□□□ -0.39
ITGB4-205ENST00000579211 HTN1P15515 57 aa12.59□□□□□ -0.39
ITGB4-205ENST00000579211 KHDC3LQ587J8 217 aa12.59□□□□□ -0.39
ITGB4-205ENST00000579211 EXOC3-AS1Q8N2X6 119 aa12.59□□□□□ -0.39
ITGB4-205ENST00000579211 RPP25LQ8N5L8 163 aaKnown RBP12.59□□□□□ -0.39
ITGB4-205ENST00000579211 HSD17B11Q8NBQ5 300 aa12.59□□□□□ -0.39
ITGB4-205ENST00000579211 FAM167A-AS1Q96KT0 104 aa12.59□□□□□ -0.39
ITGB4-205ENST00000579211 TRAV10A0A0B4J240 114 aa12.58□□□□□ -0.4
ITGB4-205ENST00000579211 UBE2L3P68036 154 aaKnown RBP12.58□□□□□ -0.4
ITGB4-205ENST00000579211 ICAM4Q14773 271 aa12.58□□□□□ -0.4
ITGB4-205ENST00000579211 Q5BKY6 102 aa12.58□□□□□ -0.4
ITGB4-205ENST00000579211 FAM122CQ6P4D5 195 aa12.58□□□□□ -0.4
ITGB4-205ENST00000579211 ZNF767PQ75MW2 155 aa12.58□□□□□ -0.4
ITGB4-205ENST00000579211 TMEM256Q8N2U0 113 aa12.58□□□□□ -0.4
ITGB4-205ENST00000579211 MRPL53Q96EL3 112 aaKnown RBP12.58□□□□□ -0.4
ITGB4-205ENST00000579211 LYSTQ99698 3801 aa12.58□□□□□ -0.4
ITGB4-205ENST00000579211 CELA1Q9UNI1 258 aa12.58□□□□□ -0.4
ITGB4-205ENST00000579211 TEX48A0A1B0GUV7 120 aa12.57□□□□□ -0.4
ITGB4-205ENST00000579211 ZNF705GA8MUZ8 300 aaPredicted RBP12.57□□□□□ -0.4
ITGB4-205ENST00000579211 IGLL5B9A064 214 aa12.57□□□□□ -0.4
ITGB4-205ENST00000579211 J3KRW8 73 aa12.57□□□□□ -0.4
ITGB4-205ENST00000579211 M0R3E3 92 aa12.57□□□□□ -0.4
ITGB4-205ENST00000579211 CRXO43186 299 aaPredicted RBP12.57□□□□□ -0.4
ITGB4-205ENST00000579211 NDUFB4O95168 129 aa12.57□□□□□ -0.4
ITGB4-205ENST00000579211 LY6G6CO95867 125 aa12.57□□□□□ -0.4
ITGB4-205ENST00000579211 M6PRP20645 277 aa12.57□□□□□ -0.4
ITGB4-205ENST00000579211 LEPP41159 167 aa12.57□□□□□ -0.4
ITGB4-205ENST00000579211 Q6ZTC4 211 aa12.57□□□□□ -0.4
ITGB4-205ENST00000579211 OR10G4Q8NGN3 311 aa12.57□□□□□ -0.4
ITGB4-205ENST00000579211 OR10G9Q8NGN4 311 aa12.57□□□□□ -0.4
ITGB4-205ENST00000579211 OR10G7Q8NGN6 311 aa12.57□□□□□ -0.4
ITGB4-205ENST00000579211 BORCS7-ASMTA0A0B4J1R7 106 aa12.56□□□□□ -0.4
ITGB4-205ENST00000579211 CSN1S1P47710 185 aa12.56□□□□□ -0.4
ITGB4-205ENST00000579211 RANP62826 216 aaKnown RBP12.56□□□□□ -0.4
ITGB4-205ENST00000579211 FXYD5Q96DB9 178 aa12.56□□□□□ -0.4
ITGB4-205ENST00000579211 YTHDF2Q9Y5A9 579 aaKnown RBP12.56□□□□□ -0.4
ITGB4-205ENST00000579211 DYNC2H1Q8NCM8 4307 aaKnown RBP12.56□□□□□ -0.4
ITGB4-205ENST00000579211 NPIPB6E9PJ23 425 aa12.55□□□□□ -0.4
ITGB4-205ENST00000579211 C12orf74Q32Q52 190 aa12.55□□□□□ -0.4
ITGB4-205ENST00000579211 TMEM78Q5T7P6 136 aa12.55□□□□□ -0.4
ITGB4-205ENST00000579211 FAM222AQ5U5X8 452 aa12.55□□□□□ -0.4
ITGB4-205ENST00000579211 LINC00477Q96M19 166 aa12.55□□□□□ -0.4
ITGB4-205ENST00000579211 DEFB131BA0A096LNP1 70 aa12.54□□□□□ -0.4
ITGB4-205ENST00000579211 MBP02144 154 aa12.54□□□□□ -0.4
ITGB4-205ENST00000579211 CT45A10P0DMU9 189 aa12.54□□□□□ -0.4
ITGB4-205ENST00000579211 RAB2AP61019 212 aa12.54□□□□□ -0.4
ITGB4-205ENST00000579211 ERCC8Q13216 396 aa12.54□□□□□ -0.4
ITGB4-205ENST00000579211 PHYHIPLQ96FC7 376 aa12.54□□□□□ -0.4
ITGB4-205ENST00000579211 C20orf144Q9BQM9 153 aa12.54□□□□□ -0.4
ITGB4-205ENST00000579211 NIPSNAP3BQ9BS92 247 aa12.54□□□□□ -0.4
ITGB4-205ENST00000579211 PSMG3Q9BT73 122 aaPredicted RBP12.54□□□□□ -0.4
ITGB4-205ENST00000579211 TNFSF18Q9UNG2 199 aa12.54□□□□□ -0.4
ITGB4-205ENST00000579211 H7BYZ3 331 aa12.53□□□□□ -0.4
ITGB4-205ENST00000579211 EIF3GO75821 320 aaKnown RBP eCLIP12.53□□□□□ -0.4
ITGB4-205ENST00000579211 PRM2P04554 102 aa12.53□□□□□ -0.4
ITGB4-205ENST00000579211 ATP6V0CP27449 155 aa12.53□□□□□ -0.4
ITGB4-205ENST00000579211 TCTAP57738 103 aa12.53□□□□□ -0.4
ITGB4-205ENST00000579211 TAS2R60P59551 318 aa12.53□□□□□ -0.4
ITGB4-205ENST00000579211 FAM74A1Q5RGS3 127 aa12.53□□□□□ -0.4
ITGB4-205ENST00000579211 PQLC2Q6ZP29 291 aa12.53□□□□□ -0.4
ITGB4-205ENST00000579211 CCDC28AQ8IWP9 274 aa12.53□□□□□ -0.4
ITGB4-205ENST00000579211 LYPD1Q8N2G4 141 aa12.53□□□□□ -0.4
ITGB4-205ENST00000579211 ODF3Q96PU9 254 aa12.53□□□□□ -0.4
ITGB4-205ENST00000579211 Q9H3A6 140 aa12.53□□□□□ -0.4
ITGB4-205ENST00000579211 DKK2Q9UBU2 259 aa12.53□□□□□ -0.4
ITGB4-205ENST00000579211 TRAV12-3A0A0B4J271 114 aa12.52□□□□□ -0.41
ITGB4-205ENST00000579211 HMGB3O15347 200 aaKnown RBP12.52□□□□□ -0.41
ITGB4-205ENST00000579211 ARPC5O15511 151 aa12.52□□□□□ -0.41
ITGB4-205ENST00000579211 CDC34P49427 236 aaPredicted RBP12.52□□□□□ -0.41
ITGB4-205ENST00000579211 DAD1P61803 113 aa12.52□□□□□ -0.41
ITGB4-205ENST00000579211 SERF2P84101 59 aa12.52□□□□□ -0.41
ITGB4-205ENST00000579211 GFI1BQ5VTD9 330 aa12.52□□□□□ -0.41
ITGB4-205ENST00000579211 CMTM2Q8TAZ6 248 aa12.52□□□□□ -0.41
ITGB4-205ENST00000579211 LINC00476Q8WZB0 136 aa12.52□□□□□ -0.41
ITGB4-205ENST00000579211 GNPNAT1Q96EK6 184 aaPredicted RBP12.52□□□□□ -0.41
ITGB4-205ENST00000579211 HYLS1Q96M11 299 aa12.52□□□□□ -0.41
ITGB4-205ENST00000579211 IGKV2-40A0A087WW87 121 aaPredicted RBP12.51□□□□□ -0.41
ITGB4-205ENST00000579211 RNF222A6NCQ9 220 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 1241.2 ms